CX289587

Overview
NameCX289587
Unique NameCX289587
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length443
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289587 vs. ExPASy Swiss-Prot
Match: NACB_NEOFI (Nascent polypeptide-associated complex subunit beta OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=egd1 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 7.781e-28
Identity = 62/113 (54.87%), Postives = 84/113 (74.34%), Query Frame = 1
Query:   94 GKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAGT 429
            GKG+ RRK K VHK++  DDK+LQ+TLK++ V  I AIEEVN+FK+D  VI F  PKV AS+ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q     AGT
Sbjct:   46 GKGTPRRKVKKVHKSSGADDKKLQTTLKKMNVQPIQAIEEVNMFKEDGNVIHFAAPKVHASVPSNTFALYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNMQKQAGT 158          
BLAST of CX289587 vs. ExPASy Swiss-Prot
Match: NACB_ASPFU (Nascent polypeptide-associated complex subunit beta OS=Aspergillus fumigatus GN=egd1 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.957e-27
Identity = 61/112 (54.46%), Postives = 83/112 (74.11%), Query Frame = 1
Query:   94 GKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAG 426
            GKG+ RRK K VHK++  DDK+LQ+TLK++ V  I AIEEVN+FK+D  VI F  PKV AS+ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q     AG
Sbjct:   49 GKGTPRRKVKKVHKSSGADDKKLQTTLKKMNVQPIQAIEEVNMFKEDGNVIHFAAPKVHASVPSNTFALYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNMQKQAG 160          
BLAST of CX289587 vs. ExPASy Swiss-Prot
Match: NACB_ASPCL (Nascent polypeptide-associated complex subunit beta OS=Aspergillus clavatus GN=egd1 PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 5.043e-27
Identity = 68/138 (49.28%), Postives = 93/138 (67.39%), Query Frame = 1
Query:   46 MNVEKLMKMAGAVRTG---------GKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQK-QAPNAG 426
            M+  KL +M  +VR           GKG+ RRK K VHK++  DDK+LQ+TLK++ V  I AIEEVN+FK+D  VI F  PKV AS+ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q  Q   AG
Sbjct:    1 MDQAKLARMQASVRIDKSATNPINRGKGTPRRKVKKVHKSSGADDKKLQTTLKKMNVQPIQAIEEVNMFKEDGNVIHFAAPKVHASVPSNTFALYGNGEEKELTELVPGILNQLGPDSLASLRKLAESYQNMQKSQAG 138          
BLAST of CX289587 vs. ExPASy Swiss-Prot
Match: NACB_MAGGR (Nascent polypeptide-associated complex subunit beta OS=Magnaporthe grisea GN=EGD1 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 6.587e-27
Identity = 61/118 (51.69%), Postives = 83/118 (70.34%), Query Frame = 1
Query:   55 EKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 405
            E+L K+  + R GGKG+ RRK K     +  DDK+LQ TLK++ V  I AIEEVN+FK D  VI F  PKV A++ ANT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q
Sbjct:    6 ERLKKLGASARIGGKGTPRRKMKRAPARSGGDDKKLQQTLKKLNVQPIQAIEEVNMFKSDGNVIHFAAPKVHAAVPANTFAIYGNGEDKELTELVPGILNQLGPDSLASLRKLAESYQ 123          
BLAST of CX289587 vs. ExPASy Swiss-Prot
Match: BT3L3_HUMAN (Transcription factor BTF3 homolog 3 OS=Homo sapiens GN=BTF3L3 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 6.587e-27
Identity = 59/119 (49.58%), Postives = 84/119 (70.59%), Query Frame = 1
Query:   58 KLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQ 411
            KL K+   VR GGKG+  RKKK  H+T T DDK+LQ +LK++ VN I  IE+VN+F +   VI F NPK QAS+A NT+ ++G  + K++ ++LP +++QLG D+L +LR+LAE   KQ
Sbjct:   40 KLAKLQAQVRIGGKGTAHRKKKVFHRTATADDKKLQFSLKKLQVNNISGIEKVNMFTNQGTVIHFNNPKFQASLAVNTFTITGHAEAKQVTEMLPSVLSQLGADSLTSLRRLAEVLPKQ 158          
BLAST of CX289587 vs. ExPASy Swiss-Prot
Match: NACB_NEUCR (Nascent polypeptide-associated complex subunit beta OS=Neurospora crassa GN=egd-1 PE=3 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 2.503e-26
Identity = 62/124 (50.00%), Postives = 85/124 (68.55%), Query Frame = 1
Query:   55 EKLMKMAGAVRTG-GKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPN 420
            E+L K+  + R G GKG+ RRK K     +  DDK+LQ+TLK++ V  I AIEEVN+FK D  VI F  PKV A++ ANT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q    N
Sbjct:    6 ERLKKLGASARIGIGKGTPRRKVKRAPARSAGDDKKLQATLKKVNVQPIQAIEEVNMFKSDGNVIHFAAPKVHAAVPANTFAIYGNGEDKELTELVPGILNQLGPDSLASLRKLAESYQNMQKN 129          
BLAST of CX289587 vs. ExPASy Swiss-Prot
Match: NACB_CRYNE (Nascent polypeptide-associated complex subunit beta OS=Cryptococcus neoformans GN=EGD1 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 2.119e-25
Identity = 67/140 (47.86%), Postives = 96/140 (68.57%), Query Frame = 1
Query:   46 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTT---DDKRLQSTLKRIGVNAIPAIEEVNIFKDDV-VIQFLNPKVQ--ASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ-----KQAPNAGTG 432
            M+ EKL K+   VR GGKG+ RRK   V K+ T+   DD++LQ+ LK++GV  I  +EEVN+FK+D  V+ F  P+VQ  A++ +NT  + G  QTK+L +++PGI+NQLGPD+L NLR+LAE +Q     + A  AG+G
Sbjct:    1 MDKEKLAKLQSQVRIGGKGTPRRK--VVKKSVTSSQGDDRKLQAALKKLGVQPITGVEEVNMFKEDGNVLHFGAPRVQVHAALPSNTLAIYGPGQTKELTELVPGILNQLGPDSLANLRRLAESYQSLTARQAAAAAGSG 138          
BLAST of CX289587 vs. ExPASy Swiss-Prot
Match: NACB_CHAGB (Nascent polypeptide-associated complex subunit beta OS=Chaetomium globosum GN=EGD1 PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 8.052e-25
Identity = 59/119 (49.58%), Postives = 83/119 (69.75%), Query Frame = 1
Query:   55 EKLMKMAGAVRTG-GKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ 405
            E+L K+  + R G GKG+ RRK K     +  DDK+LQ +LK++ V  I AIEEVN+FK D  VI F  PKV A++ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q
Sbjct:    6 ERLKKLGASARIGTGKGTPRRKVKRAPARSGADDKKLQQSLKKLNVQPIQAIEEVNMFKSDGNVIHFAAPKVHAAVPSNTFAIYGNGEDKELTELVPGILNQLGPDSLASLRKLAESYQ 124          
BLAST of CX289587 vs. ExPASy Swiss-Prot
Match: NACB_USTMA (Nascent polypeptide-associated complex subunit beta OS=Ustilago maydis GN=EGD1 PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.163e-23
Identity = 62/137 (45.26%), Postives = 85/137 (62.04%), Query Frame = 1
Query:   46 MNVEKLMKMAGAVRTGGKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDD-VVIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQ--------KQAPNAGT 429
            +N EKL K+  A RTGGKG+ RRK     K    +D +LQ+ LK++ V  +  +EEVN+FK+D  V+ F  PKV     +NT+ V G    K+L +++PGI+NQLGPD+L +LRKLAE +Q         QA  AGT
Sbjct:    3 LNQEKLAKLQAASRTGGKGTPRRKMAPKPKGPGGEDPKLQAALKKLQVEPVSGVEEVNMFKEDGNVLHFAAPKVHGLPTSNTFAVYGNGVDKELTELVPGILNQLGPDSLASLRKLAESYQAMNAQHAASQAAAAGT 139          
BLAST of CX289587 vs. ExPASy Swiss-Prot
Match: NACB_GIBZE (Nascent polypeptide-associated complex subunit beta OS=Gibberella zeae GN=EGD1 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 3.383e-23
Identity = 60/135 (44.44%), Postives = 82/135 (60.74%), Query Frame = 1
Query:   55 EKLMKMAGAVRTG----------GKGSVRRKKKAVHKTTTTDDKRLQSTLKRIGVNAIPAIEEVNIFKDDV-VIQFLNPKVQASIAANTWVVSGAPQTKKLQDILPGIINQLGPDNLDNLRKLAEQFQKQAPNAG 426
            E+L K+    RTG          GKG+ RRK K     +  DDK+LQ  LK++    I AIEEVN+FK D  VI F  PKV A++ +NT+ + G  + K+L +++PGI+NQLGPD+L +LRKLAE +Q      G
Sbjct:    6 ERLKKLGLGARTGRTSQLTEQLSGKGTPRRKVKRAPARSGADDKKLQLALKKLNTQPIQAIEEVNMFKQDGNVIHFAAPKVHAAVPSNTFAIYGNGEDKELTELVPGILNQLGPDSLASLRKLAESYQNLQKEKG 140          
The following BLAST results are available for this feature:
BLAST of CX289587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
NACB_NEOFI7.781e-2854.87Nascent polypeptide-associated complex subunit bet... [more]
NACB_ASPFU2.957e-2754.46Nascent polypeptide-associated complex subunit bet... [more]
NACB_ASPCL5.043e-2749.28Nascent polypeptide-associated complex subunit bet... [more]
NACB_MAGGR6.587e-2751.69Nascent polypeptide-associated complex subunit bet... [more]
BT3L3_HUMAN6.587e-2749.58Transcription factor BTF3 homolog 3 OS=Homo sapien... [more]
NACB_NEUCR2.503e-2650.00Nascent polypeptide-associated complex subunit bet... [more]
NACB_CRYNE2.119e-2547.86Nascent polypeptide-associated complex subunit bet... [more]
NACB_CHAGB8.052e-2549.58Nascent polypeptide-associated complex subunit bet... [more]
NACB_USTMA1.163e-2345.26Nascent polypeptide-associated complex subunit bet... [more]
NACB_GIBZE3.383e-2344.44Nascent polypeptide-associated complex subunit bet... [more]

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Properties
Property NameValue
Genbank descriptionC02014H12SK IF1 Citrus clementina cDNA clone C02014H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289587 ID=CX289587; Name=CX289587; organism=Citrus clementina; type=EST; length=443bp
TCTTCACCAAATTCTTTGTCCCCACACAAAAACCCTAGCTCCAAGATGAA
TGTGGAGAAGCTAATGAAGATGGCCGGTGCAGTTCGCACTGGTGGTAAGG
GTAGTGTGAGAAGAAAGAAGAAGGCTGTTCATAAGACAACAACCACCGAT
GACAAGAGGCTTCAGAGCACCTTGAAGAGAATAGGAGTGAATGCTATTCC
TGCAATTGAGGAAGTTAACATTTTCAAGGATGACGTCGTTATTCAGTTCT
TAAATCCCAAAGTACAAGCTTCAATTGCTGCCAACACATGGGTAGTTAGT
GGTGCCCCACAAACCAAGAAGTTGCAGGATATTCTCCCTGGAATTATCAA
TCAATTGGGGCCAGATAATTTGGACAACCTGAGGAAGTTGGCGGAGCAGT
TTCAGAAGCAAGCACCTAATGCAGGAACTGGTGCACCCACGAC
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