CX289589

Overview
NameCX289589
Unique NameCX289589
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length522
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK_SHEPA (S-adenosylmethionine synthetase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=metK PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.655e-42
Identity = 86/174 (49.43%), Postives = 117/174 (67.24%), Query Frame = 1
Query:    1 TNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDD 522
            T  ++   + E +IKPV+P K+L + T + +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ ++++GT K+ ++ ++ +V+  FD RP  +T  L+L R     +  TAAYGHFGR++
Sbjct:  196 TQADLIEGVMETIIKPVLPAKWLSKDTKYFINPTGRFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISIETFGTAKVGEELLIDLVRRHFDLRPYGLTEMLNLAR---PIYQATAAYGHFGRNE 366          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK_PSEHT (S-adenosylmethionine synthetase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=metK PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.655e-42
Identity = 84/164 (51.22%), Postives = 113/164 (68.90%), Query Frame = 1
Query:   31 EHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDD 522
            E +IKPV+P + +   T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA +C +QVSYAIG+ EP S+ V+++GT K+ +  ++++++E FD RP  +   LDL+R     +L TAAYGHFGR++
Sbjct:  205 ETIIKPVLPAELITSATKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADKCELQVSYAIGIAEPTSISVETFGTSKLEESRLIELIREHFDLRPYGLIKMLDLER---PIYLPTAAYGHFGREE 365          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK_NITEC (S-adenosylmethionine synthetase OS=Nitrosomonas eutropha (strain C91) GN=metK PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.655e-42
Identity = 83/174 (47.70%), Postives = 119/174 (68.39%), Query Frame = 1
Query:    1 TNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDD 522
            +N ++   + E +IKPV+P + L     + +NP+GRFV+GGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLAR+C VQV+YAIGV +P+S+ ++++GTGK+ D+++ +++  +FD RP  +   L+L R     + KTAAYGHFGR++
Sbjct:  197 SNGDLFEGVVEEIIKPVLPAEMLSSDIRYLVNPTGRFVVGGPMGDCGLTGRKIIVDTYGGTAHHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLARKCEVQVAYAIGVAKPVSLMLETFGTGKVSDEKLAELITRNFDLRPRAIIHELNLLR---PIYSKTAAYGHFGREE 367          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK_DELAS (S-adenosylmethionine synthetase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=metK PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.655e-42
Identity = 89/164 (54.27%), Postives = 112/164 (68.29%), Query Frame = 1
Query:   31 EHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDD 522
            E +IKPV+P ++L + T + +NP+GRFV+GGP GD GLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA GLAR+C +QV+YAIGV  P+++ V + GTG IPD EI K+V   FD RP  +   LDL R     + KTAAYGHFGR++
Sbjct:  214 EEIIKPVLPSEWLQD-TKYLINPTGRFVVGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVARPMNITVYTEGTGVIPDAEIAKLVAAHFDLRPKGIIQMLDLLR---PIYSKTAAYGHFGREE 373          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK_ACTP2 (S-adenosylmethionine synthetase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=metK PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 6.655e-42
Identity = 82/170 (48.24%), Postives = 118/170 (69.41%), Query Frame = 1
Query:   10 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRD 519
            ++   + E +IKPV+P ++L + T + +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIGV +P S+ V+++GTG++ ++ ++K++ ++FD RP  +   LDL +     + +TAAYGHFGR+
Sbjct:  198 DLVEGVMEEIIKPVLPSEWLSQNTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGRVSNETLVKLIYQNFDLRPYGLIKMLDLIQ---PIYRETAAYGHFGRE 364          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK_VARPS (S-adenosylmethionine synthetase OS=Variovorax paradoxus (strain S110) GN=metK PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 8.692e-42
Identity = 88/164 (53.66%), Postives = 116/164 (70.73%), Query Frame = 1
Query:   31 EHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDD 522
            E +IKPV+P+++L + T + +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLAR+C +QV+YAIGV +P+++ V + GTG IPD +I ++V+E FD RP  +   LDL R     + KTAAYGHFGR++
Sbjct:  214 EEIIKPVLPKEWLKD-TRYLINPTGRFVIGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLARQCQIQVAYAIGVAQPMNITVYTEGTGVIPDAKIAELVREFFDLRPKGIIQMLDLLR---PIYQKTAAYGHFGREE 373          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK_SHEHH (S-adenosylmethionine synthetase OS=Shewanella halifaxensis (strain HAW-EB4) GN=metK PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 8.692e-42
Identity = 85/174 (48.85%), Postives = 117/174 (67.24%), Query Frame = 1
Query:    1 TNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDD 522
            +  ++   + E +IKPV+P K+L + T + +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ ++++GT K+ ++ ++ +V+  FD RP  +T  L+L R     +  TAAYGHFGR++
Sbjct:  196 SQSDLIEGVMETIIKPVLPAKWLSKDTKYFINPTGRFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISIETFGTAKVGEELLIDLVRRHFDLRPYGLTEMLNLAR---PIYQATAAYGHFGREE 366          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK_SALAR (S-adenosylmethionine synthetase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=metK PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 8.692e-42
Identity = 85/164 (51.83%), Postives = 113/164 (68.90%), Query Frame = 1
Query:   31 EHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDD 522
            E +IKP++P ++L+  T F +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ V+++GT K+  +++  +V+E FD RP  +   LDL    +  + +TAAYGHFGR++
Sbjct:  205 EEIIKPILPSEWLNTSTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVSSEQLTLLVREFFDLRPYGLIQMLDLL---HPIYKETAAYGHFGREN 365          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK_CYAP8 (S-adenosylmethionine synthetase OS=Cyanothece sp. (strain PCC 8801) GN=metK PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 8.692e-42
Identity = 92/177 (51.98%), Postives = 122/177 (68.93%), Query Frame = 1
Query:   10 EIAADLKEHVIKPVIPEKYL--DEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPG--MMTINL-DLKRGGNGRFLK-TAAYGHFGRDD 522
            +I +DL E V++PV  +  +  ++ T F +NP+G+FVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA GLA +C VQVSYAIGV  P+S+ V+++GTGK+ + ++LK+V+E F+ RP   + T+NL +L     GRF +  AAYGHFGR D
Sbjct:  217 KIKSDLWEAVVQPVFGDIEIKPNQDTRFLVNPTGKFVIGGPQGDAGLTGRKIIVDTYGGYSRHGGGAFSGKDPTKVDRSAAYACRYVAKNIVAAGLADKCEVQVSYAIGVARPVSILVETFGTGKVDEDKLLKVVQELFELRPAGILQTLNLRELPSQRGGRFYQDVAAYGHFGRTD 393          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK_BLOPB (S-adenosylmethionine synthetase OS=Blochmannia pennsylvanicus (strain BPEN) GN=metK PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 8.692e-42
Identity = 87/163 (53.37%), Postives = 110/163 (67.48%), Query Frame = 1
Query:   31 EHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRD 519
            E +IKPV+P K+L   TIF +NP GRFVIGGP  D GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGVP P+S+ ++++GT KI    +++++K  FDFRP  +   LDL R     + +TA YGHFGR+
Sbjct:  207 EEIIKPVLPNKWLTNNTIFLINPGGRFVIGGPISDCGLTGRKIIVDTYGGIGRHGGGSFSGKDPSKVDRSAAYGARYVAKNIVAAGLADRCELQVSYAIGVPHPISMSIETFGTEKISHDILMQLIKNFFDFRPYGLIAMLDLLR---PIYKETAVYGHFGRE 366          
The following BLAST results are available for this feature:
BLAST of CX289589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_SHEPA6.655e-4249.43S-adenosylmethionine synthetase OS=Shewanella peal... [more]
METK_PSEHT6.655e-4251.22S-adenosylmethionine synthetase OS=Pseudoalteromon... [more]
METK_NITEC6.655e-4247.70S-adenosylmethionine synthetase OS=Nitrosomonas eu... [more]
METK_DELAS6.655e-4254.27S-adenosylmethionine synthetase OS=Delftia acidovo... [more]
METK_ACTP26.655e-4248.24S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_VARPS8.692e-4253.66S-adenosylmethionine synthetase OS=Variovorax para... [more]
METK_SHEHH8.692e-4248.85S-adenosylmethionine synthetase OS=Shewanella hali... [more]
METK_SALAR8.692e-4251.83S-adenosylmethionine synthetase OS=Salmonella ariz... [more]
METK_CYAP88.692e-4251.98S-adenosylmethionine synthetase OS=Cyanothece sp. ... [more]
METK_BLOPB8.692e-4253.37S-adenosylmethionine synthetase OS=Blochmannia pen... [more]

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Properties
Property NameValue
Genbank descriptionC02015A02SK IF1 Citrus clementina cDNA clone C02015A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289589 ID=CX289589; Name=CX289589; organism=Citrus clementina; type=EST; length=522bp
ACAAATGATGAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAGCCTGT
CATCCCCGAGAAGTACCTTGATGAGAAGACCATCTTCCACCTTAATCCAT
CAGGTCGTTTTGTCATTGGTGGGCCTCATGGTGATGCTGGTCTCACTGGA
CGTAAGATCATCATCGACACTTATGGTGGCTGGGGAGCCCATGGTGGCGG
TGCTTTCTCTGGAAAAGACCCTACTAAGGTGGATAGGAGTGGTGCATACA
TTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAACGGGCTTGCTCGCAGG
TGCATTGTCCAAGTCTCCTATGCCATTGGTGTGCCTGAGCCATTGTCTGT
TTTTGTGGACTCATATGGAACCGGCAAGATTCCTGACAAGGAGATCCTCA
AAATTGTGAAGGAAAGCTTTGATTTCAGGCCAGGAATGATGACCATCAAT
TTGGATCTCAAAAGGGGCGGTAATGGCAGGTTCTTGAAGACTGCTGCCTA
TGGACACTTTGGCAGGGATGAC
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