CX289589

Overview
NameCX289589
Unique NameCX289589
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length522
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK_SYNE7 (S-adenosylmethionine synthetase OS=Synechococcus elongatus (strain PCC 7942) GN=metK PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.529e-41
Identity = 90/178 (50.56%), Postives = 119/178 (66.85%), Query Frame = 1
Query:    7 DEIAADLKEHVIKPVIPEKYL--DEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKR---GGNGRFL-KTAAYGHFGRDD 522
            + I +DL E V+ PV  +  +  D  T F +NP+G+FVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK+IVA GLA +C VQ+SYAIGV  P+SV V+++GTGK+ D+ +L +V++ F+ RP  +  + +L+R      GRF  + AAYGHFGR+D
Sbjct:  216 ERIKSDLWEQVVLPVFSDLVIQPDSATRFLVNPTGKFVIGGPQGDAGLTGRKIIVDTYGGYSRHGGGAFSGKDPTKVDRSAAYACRYVAKNIVAAGLAEKCEVQLSYAIGVARPVSVLVETFGTGKVADEVLLDLVRKHFELRPAGIIEHFNLQRLPGERGGRFYQEVAAYGHFGRND 393          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK_PELLD (S-adenosylmethionine synthetase OS=Pelodictyon luteolum (strain DSM 273) GN=metK PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.529e-41
Identity = 87/171 (50.88%), Postives = 111/171 (64.91%), Query Frame = 1
Query:   13 IAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGK--IPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRD 519
            I  D+ E+VIK VIP   LD  T FH+NP+GRF IGGPHGD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA +C VQVSYAIGV  P+S++++++GT    + D++I +  ++ FD RP  +     L       + +TAAYGHFGRD
Sbjct:  214 IKKDIIENVIKKVIPANLLDLNTKFHINPTGRFEIGGPHGDTGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYASRHVAKNIVAAGLAEKCTVQVSYAIGVARPVSIYINTHGTAMHGLSDEQIQEKAEKIFDLRPLAIIRRFSLDNPQGWCYQETAAYGHFGRD 384          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK_LEGPC (S-adenosylmethionine synthetase OS=Legionella pneumophila (strain Corby) GN=metK PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.529e-41
Identity = 82/171 (47.95%), Postives = 116/171 (67.84%), Query Frame = 1
Query:   10 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDD 522
            ++   ++E +IK V+P ++L++KT + +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA +C +Q+SYAIGV EP S+FVD++GTG++ + EI+ ++   FD  P  +    DL R     + +TA YGH+GR++
Sbjct:  199 DLVEAIREEIIKSVLPAEWLNDKTRYFINPTGRFVIGGPLGDCGLTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSAAYAARHVAKNIVAAGLADKCELQISYAIGVAEPTSIFVDTFGTGRLKNSEIIDLIHTHFDLTPQGIIDQHDLLR---PIYRQTATYGHYGREN 366          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK_LEGPA (S-adenosylmethionine synthetase OS=Legionella pneumophila (strain Paris) GN=metK PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.529e-41
Identity = 82/171 (47.95%), Postives = 116/171 (67.84%), Query Frame = 1
Query:   10 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDD 522
            ++   ++E +IK V+P ++L++KT + +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA +C +Q+SYAIGV EP S+FVD++GTG++ + EI+ ++   FD  P  +    DL R     + +TA YGH+GR++
Sbjct:  199 DLVEAIREEIIKSVLPAEWLNDKTRYFINPTGRFVIGGPLGDCGLTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSAAYAARHVAKNIVAAGLADKCELQISYAIGVAEPTSIFVDTFGTGRLKNSEIIDLIHTHFDLTPQGIIDQHDLLR---PIYRQTATYGHYGREN 366          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK_HAES2 (S-adenosylmethionine synthetase OS=Haemophilus somnus (strain 2336) GN=metK PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.529e-41
Identity = 83/162 (51.23%), Postives = 114/162 (70.37%), Query Frame = 1
Query:   31 EHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGR 516
            E +IKP++P ++L ++T + +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIGV EP S+ V+++GTGK+ ++ ++ +++E FD RP  +   LDL +     + +TAAYGHFGR
Sbjct:  205 EEIIKPILPAEWLSKETKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVAEPTSIMVETFGTGKVANELLVGLIREFFDLRPYGLIKMLDLIQ---PIYRQTAAYGHFGR 363          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK_HAES1 (S-adenosylmethionine synthetase OS=Haemophilus somnus (strain 129Pt) GN=metK PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.529e-41
Identity = 83/162 (51.23%), Postives = 114/162 (70.37%), Query Frame = 1
Query:   31 EHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGR 516
            E +IKP++P ++L ++T + +NP+GRFVIGGP GD GLTGRKII+DTY             KDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIGV EP S+ V+++GTGK+ ++ ++ +++E FD RP  +   LDL +     + +TAAYGHFGR
Sbjct:  205 EEIIKPILPAEWLSKETKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVAEPTSIMVETFGTGKVANELLVGLIREFFDLRPYGLIKMLDLIQ---PIYRQTAAYGHFGR 363          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK_ANADE (S-adenosylmethionine synthetase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=metK PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 2.529e-41
Identity = 87/174 (50.00%), Postives = 115/174 (66.09%), Query Frame = 1
Query:    1 TNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDD 522
            +N  +   ++E VI   +P++ +D KT   +NP+GRFVIGGP GD G+TGRKII+DTY             KDP+KVDRS AY+ R  AK++VA GLA RC VQV+YAIGV EP+SV VD++GT K+P+ +I + V+E F   P  +   LDL R     + KTAAYGHFGR +
Sbjct:  191 SNKRLHEAVREQVIAKALPKRLVDRKTRILINPTGRFVIGGPMGDTGVTGRKIIVDTYGGMGRHGGGAFSGKDPSKVDRSAAYMGRYIAKNVVAAGLAARCEVQVAYAIGVAEPVSVMVDTFGTAKVPEGKIARAVREVFGLTPRAIIEGLDLLR---PVYEKTAAYGHFGRTE 361          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK2_YEAST (S-adenosylmethionine synthetase 2 OS=Saccharomyces cerevisiae GN=SAM2 PE=1 SV=3)

HSP 1 Score: 167.933 bits (424), Expect = 2.529e-41
Identity = 86/167 (51.50%), Postives = 112/167 (67.07%), Query Frame = 1
Query:   10 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHF 510
            ++   L++ +++ VIP+  LDE T + + PSGRFVIGGP GDAGLTGRKII+D Y             KD +KVDRS AY  R  AKS+VA GL +R  VQ SYAIG+ EPLS+ VD+YGT    D EI++I+K++FD RPG++   LDL R     +L TA+YGHF
Sbjct:  206 DLRTQLQKDIVEKVIPKDMLDENTKYFIQPSGRFVIGGPQGDAGLTGRKIIVDAYGGASSVGGGAFSGKDYSKVDRSAAYAARWVAKSLVAAGLCKRVQVQFSYAIGIAEPLSLHVDTYGTATKSDDEIIEIIKKNFDLRPGVLVKELDLAR---PIYLPTASYGHF 369          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK_SYNPW (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain WH7803) GN=metK PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.303e-41
Identity = 88/179 (49.16%), Postives = 118/179 (65.92%), Query Frame = 1
Query:    7 DEIAADLKEHVIKPV---IPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRG---GNGRFLK-TAAYGHFGRDD 522
            + I+ DL  HV++P    +P K   + T + +NP+G+FV+GGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK +VA GLA+R  VQ+SYAIGV +P+S+ V+S+GTGK+ + E+ ++V++ FD RPG +     L+       GRF + TAAYGHFGR D
Sbjct:  212 ERISDDLWTHVVEPATADLPLKPSKDSTRYLVNPTGKFVVGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKCLVAAGLAQRAEVQLSYAIGVAKPVSILVESFGTGKVSNAELTELVQQHFDLRPGAIIQQFKLREMPALSGGRFYRDTAAYGHFGRPD 390          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK_SULDN (S-adenosylmethionine synthetase OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=metK PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 3.303e-41
Identity = 83/174 (47.70%), Postives = 115/174 (66.09%), Query Frame = 1
Query:    1 TNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDD 522
            + ++I  D+   VI+ VIP + + EKT+FH+NP+G+FVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK++VA G+  R  +Q++YAIG+  P+S+ +D++ T  + +K+I   VKE FD  P  +  +LDL R     + KTA YGHFGR++
Sbjct:  201 SQEKIREDVIRDVIRAVIPAELMSEKTLFHINPTGKFVIGGPQGDAGLTGRKIIVDTYGGSCPHGGGAFSGKDPTKVDRSAAYACRHVAKNLVAAGVCDRVTIQIAYAIGISAPVSIMIDTHNTAIVEEKKIESCVKELFDLTPKGIIKSLDLLR---PIYRKTAVYGHFGREE 371          
The following BLAST results are available for this feature:
BLAST of CX289589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_SYNE72.529e-4150.56S-adenosylmethionine synthetase OS=Synechococcus e... [more]
METK_PELLD2.529e-4150.88S-adenosylmethionine synthetase OS=Pelodictyon lut... [more]
METK_LEGPC2.529e-4147.95S-adenosylmethionine synthetase OS=Legionella pneu... [more]
METK_LEGPA2.529e-4147.95S-adenosylmethionine synthetase OS=Legionella pneu... [more]
METK_HAES22.529e-4151.23S-adenosylmethionine synthetase OS=Haemophilus som... [more]
METK_HAES12.529e-4151.23S-adenosylmethionine synthetase OS=Haemophilus som... [more]
METK_ANADE2.529e-4150.00S-adenosylmethionine synthetase OS=Anaeromyxobacte... [more]
METK2_YEAST2.529e-4151.50S-adenosylmethionine synthetase 2 OS=Saccharomyces... [more]
METK_SYNPW3.303e-4149.16S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_SULDN3.303e-4147.70S-adenosylmethionine synthetase OS=Sulfurimonas de... [more]

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Properties
Property NameValue
Genbank descriptionC02015A02SK IF1 Citrus clementina cDNA clone C02015A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289589 ID=CX289589; Name=CX289589; organism=Citrus clementina; type=EST; length=522bp
ACAAATGATGAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAGCCTGT
CATCCCCGAGAAGTACCTTGATGAGAAGACCATCTTCCACCTTAATCCAT
CAGGTCGTTTTGTCATTGGTGGGCCTCATGGTGATGCTGGTCTCACTGGA
CGTAAGATCATCATCGACACTTATGGTGGCTGGGGAGCCCATGGTGGCGG
TGCTTTCTCTGGAAAAGACCCTACTAAGGTGGATAGGAGTGGTGCATACA
TTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAACGGGCTTGCTCGCAGG
TGCATTGTCCAAGTCTCCTATGCCATTGGTGTGCCTGAGCCATTGTCTGT
TTTTGTGGACTCATATGGAACCGGCAAGATTCCTGACAAGGAGATCCTCA
AAATTGTGAAGGAAAGCTTTGATTTCAGGCCAGGAATGATGACCATCAAT
TTGGATCTCAAAAGGGGCGGTAATGGCAGGTTCTTGAAGACTGCTGCCTA
TGGACACTTTGGCAGGGATGAC
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