CX289589

Overview
NameCX289589
Unique NameCX289589
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length522
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK_OSTTA (S-adenosylmethionine synthetase OS=Ostreococcus tauri GN=METK PE=3 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 1.246e-64
Identity = 123/174 (70.69%), Postives = 137/174 (78.74%), Query Frame = 1
Query:    1 TNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDD 522
            +N++IA DL   VIK V+PEKYLD  TIFHLNPSGRFVIGGP GDAGLTGRKIIIDTY             KDPTKVDRSGAYI RQ AKSIVA GLARR + Q+SYAIGV +PLS+ VD+YG+GKIPD EIL+ VKE FDFR GM+  +LDLKRGGN R+  TAAYGHFGRDD
Sbjct:  201 SNEKIAEDLMNEVIKKVVPEKYLDADTIFHLNPSGRFVIGGPDGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQVAKSIVAAGLARRALFQISYAIGVAQPLSIHVDTYGSGKIPDSEILEKVKEKFDFRAGMIGKSLDLKRGGNKRYQTTAAYGHFGRDD 374          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK2_PETCR (S-adenosylmethionine synthetase 2 (Fragment) OS=Petroselinum crispum GN=SMS-2 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 1.632e-56
Identity = 109/129 (84.50%), Postives = 116/129 (89.92%), Query Frame = 1
Query:  136 AGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDD 522
            AGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPD+EIL+IVKE+FDFRPGM++INLDLKRGGNGRFLKTAAYGHFGR+D
Sbjct:    1 AGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDREILQIVKETFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRED 129          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK_DICDI (S-adenosylmethionine synthetase OS=Dictyostelium discoideum GN=metK PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 1.688e-53
Identity = 109/174 (62.64%), Postives = 128/174 (73.56%), Query Frame = 1
Query:    1 TNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDD 522
            TN++I ADLKE VIK V+P +YLD+ TI+HLNPSGRFVIGGP GD+GLTGRKIIID+Y             KD TKVDRSGAY  R  AKS+VA GLA RC+VQVSY+IGV +PLSVFVD+YGTGK  D EIL I+  +FD RPG +  +L L R     F KTA+ GHFGR+D
Sbjct:  201 TNEQIRADLKELVIKAVVPAQYLDDNTIYHLNPSGRFVIGGPMGDSGLTGRKIIIDSYGGWGAHGGGAFSGKDATKVDRSGAYAARWIAKSLVAAGLADRCLVQVSYSIGVAKPLSVFVDTYGTGKKTDAEILAIIDNNFDLRPGCLMRDLQLTR---PIFQKTASGGHFGRND 371          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK_CALS8 (S-adenosylmethionine synthetase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=metK PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 3.893e-50
Identity = 100/174 (57.47%), Postives = 125/174 (71.84%), Query Frame = 1
Query:    1 TNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDD 522
            T+ +I AD+ EHVIKP+IPE  LD+ T  ++NP+GRFVIGGP GD+GLTGRKII+DTY             KDPTKVDRS  Y  R  AK+IVA GLA++C VQ+SYAIGV  PLS+ VD++GTGKI D++I +IVK  FD RP  +  +LDL+R     + K AAYGHFGR+D
Sbjct:  205 THAQIEADVIEHVIKPIIPEGMLDKNTKIYINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSATYAARYVAKNIVAAGLAKKCEVQLSYAIGVARPLSIRVDTFGTGKIDDEKIAEIVKRVFDLRPAAIIRDLDLRR---PIYKKVAAYGHFGRED 375          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK2_PONAB (S-adenosylmethionine synthetase isoform type-2 OS=Pongo abelii GN=MAT2A PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.133e-49
Identity = 101/171 (59.06%), Postives = 122/171 (71.35%), Query Frame = 1
Query:    7 DEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRD 519
            DE+   LKE VIK V+P KYLDE TI+HL PSGRFVIGGP GDAGLTGRKII+DTY             KD TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV  PLS+ +  YGT +  ++E+L+IVK++FD RPG++  +LDLK+     + +TAAYGHFGRD
Sbjct:  216 DEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD 383          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK2_MOUSE (S-adenosylmethionine synthetase isoform type-2 OS=Mus musculus GN=Mat2a PE=2 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 1.133e-49
Identity = 101/171 (59.06%), Postives = 122/171 (71.35%), Query Frame = 1
Query:    7 DEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRD 519
            DE+   LKE VIK V+P KYLDE TI+HL PSGRFVIGGP GDAGLTGRKII+DTY             KD TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV  PLS+ +  YGT +  ++E+L+IVK++FD RPG++  +LDLK+     + +TAAYGHFGRD
Sbjct:  216 DEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD 383          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK2_MACFA (S-adenosylmethionine synthetase isoform type-2 OS=Macaca fascicularis GN=MAT2A PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.133e-49
Identity = 101/171 (59.06%), Postives = 122/171 (71.35%), Query Frame = 1
Query:    7 DEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRD 519
            DE+   LKE VIK V+P KYLDE TI+HL PSGRFVIGGP GDAGLTGRKII+DTY             KD TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV  PLS+ +  YGT +  ++E+L+IVK++FD RPG++  +LDLK+     + +TAAYGHFGRD
Sbjct:  216 DEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD 383          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK2_HUMAN (S-adenosylmethionine synthetase isoform type-2 OS=Homo sapiens GN=MAT2A PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 1.133e-49
Identity = 101/171 (59.06%), Postives = 122/171 (71.35%), Query Frame = 1
Query:    7 DEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRD 519
            DE+   LKE VIK V+P KYLDE TI+HL PSGRFVIGGP GDAGLTGRKII+DTY             KD TKVDRS AY  R  AKS+V  GL RR +VQVSYAIGV  PLS+ +  YGT +  ++E+L+IVK++FD RPG++  +LDLK+     + +TAAYGHFGRD
Sbjct:  216 DEMRDALKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKSERELLEIVKKNFDLRPGVIVRDLDLKK---PIYQRTAAYGHFGRD 383          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK_ANATD (S-adenosylmethionine synthetase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=metK PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.479e-49
Identity = 100/174 (57.47%), Postives = 125/174 (71.84%), Query Frame = 1
Query:    1 TNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDD 522
            T+ +I AD+ EHVIKPVIPE  LD+ T   +NP+GRFVIGGP GD+GLTGRKII+DTY             KDPTKVDRS  Y  R  AK+IVA+GLA++C VQVSYAIGV  PLS+ VD++GTGKI D++I +IVK  FD RP  +  +L+L+R     + + AAYGHFGR+D
Sbjct:  205 THAQIEADVIEHVIKPVIPEGMLDKNTKIFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSATYAARYVAKNIVASGLAKKCEVQVSYAIGVARPLSIRVDTFGTGKISDEKIAEIVKRVFDLRPAAIIRDLNLRR---PIYKQVAAYGHFGRED 375          
BLAST of CX289589 vs. ExPASy Swiss-Prot
Match: METK_CLOPS (S-adenosylmethionine synthetase OS=Clostridium perfringens (strain SM101 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 1.932e-49
Identity = 98/174 (56.32%), Postives = 126/174 (72.41%), Query Frame = 1
Query:    1 TNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDD 522
            + ++I ADL EHVIK VIP + LDE T +++NP+GRFVIGGP GDAGLTGRKII+DTY             KDPTKVDRS AY  R  AK++VA G+A +  VQV+YAIGV +P+S+ VD++GTGKI D+EI+ I+ + FD RPG +  +LDL+R     + +TAAYGHFGR D
Sbjct:  203 SQEQIQADLMEHVIKAVIPAELLDENTKYYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGIADKLEVQVAYAIGVAKPVSIIVDTFGTGKISDEEIVNIINKVFDLRPGAIIRDLDLRR---PIYRQTAAYGHFGRTD 373          
The following BLAST results are available for this feature:
BLAST of CX289589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_OSTTA1.246e-6470.69S-adenosylmethionine synthetase OS=Ostreococcus ta... [more]
METK2_PETCR1.632e-5684.50S-adenosylmethionine synthetase 2 (Fragment) OS=Pe... [more]
METK_DICDI1.688e-5362.64S-adenosylmethionine synthetase OS=Dictyostelium d... [more]
METK_CALS83.893e-5057.47S-adenosylmethionine synthetase OS=Caldicellulosir... [more]
METK2_PONAB1.133e-4959.06S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MOUSE1.133e-4959.06S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_MACFA1.133e-4959.06S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK2_HUMAN1.133e-4959.06S-adenosylmethionine synthetase isoform type-2 OS=... [more]
METK_ANATD1.479e-4957.47S-adenosylmethionine synthetase OS=Anaerocellum th... [more]
METK_CLOPS1.932e-4956.32S-adenosylmethionine synthetase OS=Clostridium per... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC02015A02SK IF1 Citrus clementina cDNA clone C02015A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289589 ID=CX289589; Name=CX289589; organism=Citrus clementina; type=EST; length=522bp
ACAAATGATGAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAGCCTGT
CATCCCCGAGAAGTACCTTGATGAGAAGACCATCTTCCACCTTAATCCAT
CAGGTCGTTTTGTCATTGGTGGGCCTCATGGTGATGCTGGTCTCACTGGA
CGTAAGATCATCATCGACACTTATGGTGGCTGGGGAGCCCATGGTGGCGG
TGCTTTCTCTGGAAAAGACCCTACTAAGGTGGATAGGAGTGGTGCATACA
TTGTTAGGCAGGCTGCTAAGAGCATTGTTGCAAACGGGCTTGCTCGCAGG
TGCATTGTCCAAGTCTCCTATGCCATTGGTGTGCCTGAGCCATTGTCTGT
TTTTGTGGACTCATATGGAACCGGCAAGATTCCTGACAAGGAGATCCTCA
AAATTGTGAAGGAAAGCTTTGATTTCAGGCCAGGAATGATGACCATCAAT
TTGGATCTCAAAAGGGGCGGTAATGGCAGGTTCTTGAAGACTGCTGCCTA
TGGACACTTTGGCAGGGATGAC
back to top