CX289591
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 181.415 bits (459), Expect = 1.980e-45 Identity = 83/136 (61.03%), Postives = 101/136 (74.26%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAARNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 410 GRGP+QL+WNYNY CG +G DLLNNPDL+A + V++FK+AIWFWMTAQPPKPSCH VI +W+PS D AGRLPGYG+ TNIINGG+ECG G + +RIGF+ +C FG+ PG NLDC NQR + Sbjct: 197 GRGPMQLSWNYNYGLCGRAIG--VDLLNNPDLVAND----AVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDCYNQRSF 326
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHI9_ORYSJ (Chitinase 9 OS=Oryza sativa subsp. japonica GN=Cht9 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 2.586e-45 Identity = 83/142 (58.45%), Postives = 106/142 (74.65%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAARNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMA 428 GRGPIQL++NYNY GE +G EDLLNNP+L+A++ V+SFK+A+WFWMT Q PKPSCH+VI +W PS+ D+ AGR+PGYG+ TNIINGG+ECG+G +D NRIGF+ +C GI G NLDC +QRP+ L A Sbjct: 197 GRGPIQLSYNYNYGPAGEAIG--EDLLNNPELVASDP----VVSFKTALWFWMTPQSPKPSCHDVITGQWTPSSGDIAAGRVPGYGVITNIINGGLECGFGPDDRVANRIGFYQRYCDVLGIGYGSNLDCYDQRPFNSGLTA 332
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 3.378e-45 Identity = 83/145 (57.24%), Postives = 103/145 (71.03%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAARNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 437 GRGP+QL+WNYNY +CG +G DLLNNPDLL+++ +SFKSA WFWMT Q PKPSCH VII W PS++D AGR+PGYG+ TNIINGG+ECG G N +RIGF+ +C G+ G+NLDC NQ P+G + SM Sbjct: 186 GRGPMQLSWNYNYGQCGRAIG--VDLLNNPDLLSSDP----TISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRVPGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVSVDSM 324
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 1.677e-44 Identity = 81/136 (59.56%), Postives = 100/136 (73.53%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAARNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 410 GRGPIQ+T+NYNY G+ +G DLLNNPDL+A++ +SFK+A WFWMT Q PKPSCH VI +W PSA+D AGR+PGYG TNIINGG+ECG+G +D +RIGF+ +C G+ GDNLDC NQRPY Sbjct: 188 GRGPIQITYNYNYGPAGQAIG--SDLLNNPDLVASD----ATVSFKTAFWFWMTPQSPKPSCHAVITGQWTPSADDQAAGRVPGYGEITNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSYGDNLDCYNQRPY 317
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 2.860e-44 Identity = 82/145 (56.55%), Postives = 106/145 (73.10%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAARNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 437 GRGPIQ++ NYNY CG +G DLLNNPDL+AT+ V+SFK+A+WFWMT Q PKPSCH+VII W PS+ D A RLPG+G+ TNIINGG+ECG G ++ ++RIGF+ +C G+ PGDNLDC NQR +G L+ ++ Sbjct: 190 GRGPIQISHNYNYGPCGRAIG--VDLLNNPDLVATDP----VISFKTALWFWMTPQSPKPSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGGLECGRGTDNRVQDRIGFYRRYCSILGVTPGDNLDCVNQRWFGNALLVDTL 328
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 2.860e-44 Identity = 83/148 (56.08%), Postives = 106/148 (71.62%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAARNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM*SS 446 GRGPIQ++WNYNY +CG +G DLLN PDL+AT+ V+SFKSA+WFWMTAQ PKPS H+VI W PS+ DV A RLPGYG TNIINGG+ECG G + ++RIGFF +C G+ G+NLDC +Q P+G +L+ + +S Sbjct: 186 GRGPIQISWNYNYGQCGRAIG--VDLLNKPDLVATDS----VISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSLLLSDLVTS 327
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 4.878e-44 Identity = 83/148 (56.08%), Postives = 105/148 (70.95%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAARNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM*SS 446 GRGPIQ++WNYNY +CG +G DLLN PDL+AT+ V+SFKSA+WFWMTAQ PKPS H+VI W PS+ DV A RLPGYG TNIINGG+ECG G + ++RIGFF +C G+ G+NLDC +Q P+G +L + +S Sbjct: 185 GRGPIQISWNYNYGQCGRAIG--VDLLNKPDLVATDS----VISFKSALWFWMTAQSPKPSSHDVITSRWTPSSADVAARRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSLFLSDLVTS 326
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 4.878e-44 Identity = 82/145 (56.55%), Postives = 101/145 (69.66%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAARNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 437 GRGP+QL+WNYNY +CG +G DLLNNPDLL+++ +SFKSA WFWMT Q PKPSCH VII W PS++D AGR GYG+ TNIINGG+ECG G N +RIGF+ +C G+ G+NLDC NQ P+G + SM Sbjct: 164 GRGPMQLSWNYNYGQCGRAIG--VDLLNNPDLLSSDP----TISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRATGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFGNGVSVDSM 302
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHIA_SOLCI (Acidic endochitinase pcht28 OS=Solanum chilense PE=2 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 1.419e-43 Identity = 78/136 (57.35%), Postives = 100/136 (73.53%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAARNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 410 GRGPIQLT NY R G+G+G G+DL+NNPDL+AT+ ++SF++AIWFWMTAQ KPSCH VII +W PS D A R+PGYG+ TNIINGG+EC G N A +RIGF+ +CG + G+NLDC+NQ+ + Sbjct: 119 GRGPIQLTHQSNYERAGQGIGVGQDLVNNPDLVATDP----IISFRTAIWFWMTAQDNKPSCHNVIIGQWTPSPADTAANRVPGYGVITNIINGGLECNMGPNTAVESRIGFYRRYCGMLNVPTGENLDCNNQKNF 250
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 1.854e-43 Identity = 78/136 (57.35%), Postives = 100/136 (73.53%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAARNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 410 GRGP+QL+WNYNY +CG +G DLLNNPDL++ + V++FK+AIWFWMT Q PKPSCH VI+ +W+PS D AGR+PGYG+ TNIINGG+ECG G + +RIGF+ +C G+ PG NLDC NQR + Sbjct: 182 GRGPMQLSWNYNYGQCGRAIG--SDLLNNPDLVSNDP----VIAFKAAIWFWMTPQSPKPSCHAVIVGQWQPSDADRAAGRVPGYGVITNIINGGLECGRGQDARVADRIGFYQRYCNILGVNPGGNLDCYNQRSF 311 The following BLAST results are available for this feature:
BLAST of CX289591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289591 ID=CX289591; Name=CX289591; organism=Citrus clementina; type=EST; length=501bpback to top |