CX289591
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 4.129e-43 Identity = 78/136 (57.35%), Postives = 99/136 (72.79%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAARNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 410 GRGPIQLT NY R G+G+G G++L+NNPDL+AT+ ++SFK+AIWFWMT Q KPSCH VII +W PS D A R+PGYG+ TNIING ECG G N AA +RIGF+ +CG + G+NLDC+NQ+ + Sbjct: 119 GRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDP----IISFKTAIWFWMTEQDNKPSCHNVIIGQWTPSPKDTAANRVPGYGVITNIINGQFECGMGPNTAAESRIGFYRRYCGMLNVPTGENLDCNNQKNF 250
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHIX_PEA (Endochitinase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 2.677e-42 Identity = 80/136 (58.82%), Postives = 100/136 (73.53%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAARNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 410 GRGPIQLT NYNY G+ + EDL+NNPDLL+TN +SFK+AIWFWMT Q KPS H+VI W PSA D +AGR+PGYG+ TNIINGGIECG+G ++ +R+GF+ +C FG+ PG NLDC+NQR + Sbjct: 190 GRGPIQLTHNYNYGLAGQAIK--EDLINNPDLLSTNP----TVSFKTAIWFWMTPQANKPSSHDVITGRWTPSAADSSAGRVPGYGVITNIINGGIECGHGQDNRVDDRVGFYKRYCQIFGVDPGGNLDCNNQRSF 319
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.017e-41 Identity = 78/145 (53.79%), Postives = 104/145 (71.72%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAARNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 437 GRGPIQ+++NYNY + G+ +G DL+NNPDL+AT+ V+SFK+A WFWMT Q PKPSCH VI W PS D +AGRLPG+G+ TNIINGG+ECG G ++RIGF+ +C + G+NLDC+NQRP+G L+ ++ Sbjct: 176 GRGPIQISYNYNYGQAGKAIG--VDLVNNPDLVATD----AVISFKTAFWFWMTPQSPKPSCHNVITGGWTPSGADRSAGRLPGFGVITNIINGGVECGKGVVPQVQDRIGFYKRYCDILRVSYGNNLDCNNQRPFGSGLLLDTI 314
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.735e-41 Identity = 77/137 (56.20%), Postives = 98/137 (71.53%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAARNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 413 GRGPIQ+++NYNY G +G +LLNNPDL+A + V+SFK+A+WFWMTAQ PKPS H+VI W PS D GR+PG+G+ TNIINGG+EC G N NRIGF+ +C G+ PG+NLDC+NQRP+G Sbjct: 116 GRGPIQISYNYNYGAAGSAIG--VNLLNNPDLVAND----AVVSFKTALWFWMTAQQPKPSAHDVITGRWSPSVADSAPGRVPGFGVITNIINGGMECNSGSNALMDNRIGFYRRYCQILGVDPGNNLDCANQRPFG 246
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 167.933 bits (424), Expect = 2.266e-41 Identity = 82/141 (58.16%), Postives = 97/141 (68.79%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAA-RNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNL 422 GRGPIQL+WNYNY CG+ L LL P+L+ T+ V+SFK+AIWFWM Q PKPSCH VI W PSA D+ AGR+PGYG+ TNIINGGIECG GG +AA +RIGF+ +C G G NLDC QRP+G L Sbjct: 199 GRGPIQLSWNYNYGLCGDDLKL--PLLQEPELVETDP----VISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNIINGGIECGQGGPNAANEDRIGFYKKYCDSLGTTYGSNLDCYQQRPFGYGL 333
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 2.959e-41 Identity = 79/137 (57.66%), Postives = 98/137 (71.53%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAARNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 413 GRGPIQLT NY + G +G ++L+NNPDL+AT+ +SFK+AIWFWMT Q KPS H+VII W PSA D A R+PGYG+ TNIINGGIECG G NDA +RIG++ +CG + PG+NLDC NQR +G Sbjct: 121 GRGPIQLTNRNNYEKAGTAIG--QELVNNPDLVATD----ATISFKTAIWFWMTPQDNKPSSHDVIIGRWTPSAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDCYNQRNFG 251
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 3.865e-41 Identity = 78/136 (57.35%), Postives = 97/136 (71.32%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAARNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 410 GRGPIQL++N+NY G +G DLL+NPDL+AT+ +SFK+A+WFWMT Q KPS H+VI W PS D AGR PGYG+ TNI+NGG+ECG+G +D NRIGF+ +CG FGI G NLDC NQRP+ Sbjct: 200 GRGPIQLSFNFNYGPAGRAIG--VDLLSNPDLVATD----ATVSFKTALWFWMTPQGNKPSSHDVITGRWAPSPADAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDCYNQRPF 329
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 8.610e-41 Identity = 73/136 (53.68%), Postives = 98/136 (72.06%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAARNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 410 GRGPIQ+++NYNY G+ +G +LL+NPDL+A++ +SFK+A WFWMT Q PKPSCH V+ +W P+ ND AGR+PGYG+ TNIINGG+ECG+G + +RIGF+ +C G+ G NLDC NQRP+ Sbjct: 192 GRGPIQISYNYNYGPAGQAIG--SNLLSNPDLVASD----ATVSFKTAFWFWMTPQSPKPSCHAVMTGQWTPNGNDQAAGRVPGYGVVTNIINGGVECGHGADSRVADRIGFYKRYCDMLGVSYGANLDCYNQRPF 321
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHI11_ORYSJ (Chitinase 11 OS=Oryza sativa subsp. japonica GN=Cht11 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 8.610e-41 Identity = 76/138 (55.07%), Postives = 103/138 (74.64%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYG-GNDAARNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 413 GRGPIQLT YNY G+ LG DL+NNPDL++++ V++F++AIWFWMTAQ PKPSCH+VI ++W PS +D ++GRLPGYG+ TNIINGG ECG G D A++R+G++ +C F + GDN+ C +Q+PYG Sbjct: 123 GRGPIQLTHKYNYQLAGDALGL--DLVNNPDLVSSDP----VVAFRTAIWFWMTAQSPKPSCHDVITNQWTPSGDDRSSGRLPGYGMATNIINGGEECGKGYSTDNAKDRVGYYKRYCDMFRVGYGDNIACRDQKPYG 254
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 5.581e-40 Identity = 78/136 (57.35%), Postives = 96/136 (70.59%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAARNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 410 GRGPIQLT NY G+ +G +DL+NNPDL+AT+ +SFK+AIWFWMTAQ KPSCH+VI +W PSA D +A R PGYG+ TNIINGGIECG G N +RIGF+ +C + PGDNLDC +QR + Sbjct: 115 GRGPIQLTGQSNYDLAGQAIG--QDLVNNPDLVATD----ATVSFKTAIWFWMTAQGNKPSCHDVITGQWTPSAADASANRQPGYGVITNIINGGIECGKGQNPQVEDRIGFYRRYCTILNVAPGDNLDCYDQRNF 244 The following BLAST results are available for this feature:
BLAST of CX289591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289591 ID=CX289591; Name=CX289591; organism=Citrus clementina; type=EST; length=501bpback to top |