CX289591
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.303e-16 Identity = 43/130 (33.08%), Postives = 67/130 (51.54%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAARNRIGFFTTFCGKFGIQPGDNLDC 392 GRGP+Q++WN+NY G+ +G D L +PD +A + VL+F++A+W+W + H+ + G+G T ING +EC A NR+ ++ FC +FG+ PG NL C Sbjct: 167 GRGPLQISWNFNYGPAGQSIGF--DGLGDPDAVARSP----VLAFQTALWYWTN------NVHDAFVSG-------------QGFGATIRAINGALECDGKNPTAVSNRVAYYQQFCQQFGVDPGSNLTC 271
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 5.620e-16 Identity = 44/130 (33.85%), Postives = 66/130 (50.77%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAARNRIGFFTTFCGKFGIQPGDNLDC 392 GRGP+Q++WN+NY G+ +G D L +PD +A + +SFK+A+WFWM N+V+ G+G T ING +EC A R+ ++ +C +FG+ PG NL C Sbjct: 183 GRGPLQISWNFNYGPAGKNIGF--DGLRDPDKVAQDP----TISFKTALWFWM---------------------NNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYCRQFGVSPGGNLYC 285
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.758e-15 Identity = 47/131 (35.88%), Postives = 68/131 (51.91%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAARN-RIGFFTTFCGKFGIQPGDNLDC 392 GRGP+Q++WNYNY G +G D L +P +A + V++FK+A+WFWM S H V+ G+G TT + +ECG G N A N R+G++ +C + G+ PG NL C Sbjct: 167 GRGPLQISWNYNYGPAGRAIGF--DGLGDPGRVARD----AVVAFKAALWFWMN------SVHGVVPQ---------------GFGATTRAMQRALECG-GNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 269
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.361e-14 Identity = 45/131 (34.35%), Postives = 67/131 (51.15%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCGEGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAARN-RIGFFTTFCGKFGIQPGDNLDC 392 GRGP+Q++WNYNY G +G L +P+ +A + V++FK+A+WFWM N+V+ G+G T ING +EC G N A N R+G++ +C + + PG NL C Sbjct: 178 GRGPLQISWNYNYGPAGRDIGFNG--LADPNRVA----QDAVIAFKTALWFWM---------------------NNVHGVMPQGFGATIRAINGALECN-GNNPAQMNARVGYYKQYCQQLRVDPGPNLIC 280
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 6.870e-14 Identity = 44/135 (32.59%), Postives = 65/135 (48.15%), Query Frame = 3 Query: 3 GRGPIQLTWNYNYLRCG-----EGLGRGEDLLNNPDLLATNDKEGRVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYGGNDAARNRIGFFTTFCGKFGIQPGDNLDC 392 GRGPIQL+WN+NY G +GLG E + N+ V+SFK+A+W+WM P +I++ G+G T ING +EC + R+ ++T +C + G+ GDNL C Sbjct: 168 GRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDV-----------VVSFKTALWYWMQHVRP-------VINQ--------------GFGATIRAINGALECDGANPTTVQARVNYYTEYCRQLGVATGDNLTC 270
BLAST of CX289591 vs. ExPASy Swiss-Prot
Match: CHI4_ARAHY (Endochitinase 4 (Fragment) OS=Arachis hypogaea PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.398e-12 Identity = 29/46 (63.04%), Postives = 36/46 (78.26%), Query Frame = 3 Query: 159 MTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIEC 296 MT Q KPSCH+VI + W+P+A D AGR PGYG+ TNIINGG++C Sbjct: 1 MTPQGNKPSCHDVITNAWRPTATDSAAGRAPGYGVITNIINGGLDC 46 The following BLAST results are available for this feature:
BLAST of CX289591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289591 ID=CX289591; Name=CX289591; organism=Citrus clementina; type=EST; length=501bpback to top |