CX289593
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289593 vs. ExPASy Swiss-Prot
Match: C90D2_ORYSJ (Cytochrome P450 90D2 OS=Oryza sativa subsp. japonica GN=CYP90D2 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 2.279e-17 Identity = 39/115 (33.91%), Postives = 68/115 (59.13%), Query Frame = 1 Query: 1 GTFREALTEVTIDGYKIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKMIRNPNLMPEKGLPVR 345 G R+A+ +V + G+ IPKG+ + + H D + P KF+P R++ D+ S+ PFG G +CPG + ARL+ +F H+LV FRW + ++ ++ P + ++G+P+R Sbjct: 370 GIMRKAVRDVEVKGHLIPKGWCVFVYFRSVHLDDTLYDEPYKFNPWRWKEKDMSNGSFTPFGGGQRLCPGLDLARLEASIFLHHLVTSFRW--VAEEDHIVNFPTVRLKRGMPIR 482
BLAST of CX289593 vs. ExPASy Swiss-Prot
Match: C88A1_MAIZE (Cytochrome P450 88A1 OS=Zea mays GN=CYP88A1 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 8.661e-17 Identity = 35/95 (36.84%), Postives = 62/95 (65.26%), Query Frame = 1 Query: 4 TFREALTEVTIDGYKIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIP 288 +FR+A +V ++GY IPKG+K+ + H DP+ +P+P KFDPSR++G+ +++ FG G +CPG + A+L++ VF H+ + ++ + P Sbjct: 400 SFRQATRDVFVNGYLIPKGWKVQLWYRSVHMDPQVYPDPTKFDPSRWEGHSPRAGTFLAFGLGARLCPGNDLAKLEISVFLHHFLLGYKLARTNP 494
BLAST of CX289593 vs. ExPASy Swiss-Prot
Match: CP26A_XENLA (Cytochrome P450 26A1 OS=Xenopus laevis GN=cyp26a1 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.131e-16 Identity = 43/118 (36.44%), Postives = 65/118 (55.08%), Query Frame = 1 Query: 1 GTFREALTEVTIDGYKIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQG---NDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKMIRNPNLMPEKGLPVR 345 G FR AL ++GY+IPKG+ + +++ TH + + FP+ +KF+P R+ D F ++PFG G C GKEFA++ L VF L R WE + M +P + P LP + Sbjct: 367 GGFRVALKTFVLNGYQIPKGWNVIYSIADTHGEADLFPDTDKFNPDRFLTPLPRDSSRFGFIPFGGGVRCCIGKEFAKILLKVFVVELCRNCDWELLNGSPAMTTSPIICPVDNLPAK 484
BLAST of CX289593 vs. ExPASy Swiss-Prot
Match: CP26A_HUMAN (Cytochrome P450 26A1 OS=Homo sapiens GN=CYP26A1 PE=1 SV=2) HSP 1 Score: 83.9593 bits (206), Expect = 3.291e-16 Identity = 44/118 (37.29%), Postives = 64/118 (54.24%), Query Frame = 1 Query: 1 GTFREALTEVTIDGYKIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQ---GNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKMIRNPNLMPEKGLPVR 345 G FR AL ++GY+IPKG+ + +++ TH E F N E+F+P R+ D FS++PFG G C GKEFA++ L +F L R W+ + M +P + P LP R Sbjct: 372 GGFRVALKTFELNGYQIPKGWNVIYSICDTHDVAEIFTNKEEFNPDRFMLPHPEDASRFSFIPFGGGLRSCVGKEFAKILLKIFTVELARHCDWQLLNGPPTMKTSPTVYPVDNLPAR 489
BLAST of CX289593 vs. ExPASy Swiss-Prot
Match: CP26A_MOUSE (Cytochrome P450 26A1 OS=Mus musculus GN=Cyp26a1 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 7.332e-16 Identity = 43/118 (36.44%), Postives = 64/118 (54.24%), Query Frame = 1 Query: 1 GTFREALTEVTIDGYKIPKGFKLHWAVNATHKDPECFPNPEKFDPSRY---QGNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKMIRNPNLMPEKGLPVR 345 G FR AL ++GY+IPKG+ + +++ TH + F N E+F+P R+ D FS++PFG G C GKEFA++ L +F L R W+ + M +P + P LP R Sbjct: 372 GGFRVALKTFELNGYQIPKGWNVIYSICDTHDVADIFTNKEEFNPDRFIVPHPEDASRFSFIPFGGGLRSCVGKEFAKILLKIFTVELARHCDWQLLNGPPTMKTSPTVYPVDNLPAR 489
BLAST of CX289593 vs. ExPASy Swiss-Prot
Match: CP26A_DANRE (Cytochrome P450 26A1 OS=Danio rerio GN=cyp26a1 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 9.576e-16 Identity = 42/118 (35.59%), Postives = 62/118 (52.54%), Query Frame = 1 Query: 1 GTFREALTEVTIDGYKIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQG---NDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKMIRNPNLMPEKGLPVR 345 G FR AL ++GY+IPKG+ + +++ TH + FPN E+F P R+ D F+Y+PFG G +C GKEFA++ L +F L + W M P + P LP + Sbjct: 368 GGFRVALKTFELNGYQIPKGWNVIYSICDTHDVADVFPNKEEFQPERFMSKGLEDGSRFNYIPFGGGSRMCVGKEFAKVLLKIFLVELTQHCNWILSNGPPTMKTGPTIYPVDNLPTK 485
BLAST of CX289593 vs. ExPASy Swiss-Prot
Match: C90C1_ARATH (Cytochrome P450 90C1 OS=Arabidopsis thaliana GN=ROT3 PE=2 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 9.576e-16 Identity = 39/118 (33.05%), Postives = 70/118 (59.32%), Query Frame = 1 Query: 1 GTFREALTEVTIDGYKIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQ---GNDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKMIRNPNLMPEKGLPVR 345 G +R+AL +V I GY IPKG+ + + + H D + + NP +FDP R+ G+ + PFG G +CPG E ++L++ +F H+LV ++ W +++++ P + ++ LP+R Sbjct: 393 GVWRKALKDVEIKGYLIPKGWCVLASFISVHMDEDIYDNPYQFDPWRWDRINGSANSSICFTPFGGGQRLCPGLELSKLEISIFLHHLVTRYSW--TAEEDEIVSFPTVKMKRRLPIR 508
BLAST of CX289593 vs. ExPASy Swiss-Prot
Match: C90B1_ARATH (Cytochrome P450 90B1 OS=Arabidopsis thaliana GN=CYP90B1 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.133e-15 Identity = 45/124 (36.29%), Postives = 66/124 (53.23%), Query Frame = 1 Query: 10 REALTEVTIDGYKIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGNDIVPFS------------YVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKMIRNPNLMPEKGLPVR 345 R+AL +V GY IP G+K+ ++A H D + P F+P R+Q + S Y+PFG GP +C G E A+L++ VF H+LV KF WE + D++ P + GLP+R Sbjct: 386 RKALKDVRYKGYDIPSGWKVLPVISAVHLDNSRYDQPNLFNPWRWQQQNNGASSSGSGSFSTWGNNYMPFGGGPRLCAGSELAKLEMAVFIHHLVLKFNWE-LAEDDQPFAFPFVDFPNGLPIR 508
BLAST of CX289593 vs. ExPASy Swiss-Prot
Match: C72B2_PINTA (Cytochrome P450 720B2 OS=Pinus taeda GN=CYP720B2 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 4.752e-15 Identity = 45/121 (37.19%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 1 GTFREALTEV-TIDGYKIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQGND-----IVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKMIRNPNLMPEKGLPVR 345 G FRE ++ T G+ IP+G+ ++ + TH D + + KFDP R+Q + + S++PFG G +CPG A+++L +F HN V KFRWE + D+K+ P KGLP+R Sbjct: 363 GVFRETKEDIKTKGGFVIPRGWTVYVFLTGTHLDEKYHSSALKFDPWRWQPHLQDQELLKNPSFMPFGGGARLCPGMHLAKMELALFLHNFVTKFRWE-ALQDDKISYFPFPRLIKGLPIR 482
BLAST of CX289593 vs. ExPASy Swiss-Prot
Match: CP26A_CHICK (Cytochrome P450 26A1 OS=Gallus gallus GN=CYP26A1 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.359e-14 Identity = 40/118 (33.90%), Postives = 64/118 (54.24%), Query Frame = 1 Query: 1 GTFREALTEVTIDGYKIPKGFKLHWAVNATHKDPECFPNPEKFDPSRYQG---NDIVPFSYVPFGAGPHICPGKEFARLKLLVFFHNLVRKFRWEKIIPDEKMIRNPNLMPEKGLPVR 345 G FR AL + ++GY+IPKG+ + +++ TH + F + ++F+P R+ D FS++PFG G C GKEFA++ L +F L R W+ + M P + P LP + Sbjct: 367 GGFRIALKTLELNGYQIPKGWNVIYSICDTHDVADLFTDKDEFNPDRFMSPSPEDSSRFSFIPFGGGLRSCVGKEFAKVLLKIFTVELARSCDWQLLNGPPTMKTGPIVYPVDNLPAK 484 The following BLAST results are available for this feature:
BLAST of CX289593 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289593 ID=CX289593; Name=CX289593; organism=Citrus clementina; type=EST; length=450bpback to top |