CX289804

Overview
NameCX289804
Unique NameCX289804
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length572
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289804 vs. ExPASy Swiss-Prot
Match: KIF10_DICDI (Kinesin-related protein 10 OS=Dictyostelium discoideum GN=kif10 PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.034e-28
Identity = 83/196 (42.35%), Postives = 110/196 (56.12%), Query Frame = 1
Query:   13 EVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKTK-SHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISAL------------ASKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETLCSLNFASRVRGIESGPARKQSDISELFKYKQMAEKLKQDEKETKKLQ 561
            +V++LLK G   R    T  N+ SSRSH +L++TVK +NL +  K     L L+DLAGSER  K    G+RLKE   INKSL ALG+ I AL            +S    IPYR+SKLT IL+ SL G CKT+M   ISP+SS   ET  +L +A R + I++    K    S      Q  E +K+  +E K+L+
Sbjct:  214 QVFKLLKYGNLNRKQSPTQTNQTSSRSHAVLQITVKQQNLQDKSKISFGKLSLIDLAGSERASKTLNTGDRLKEGTSINKSLLALGNCIKALGELCKNQQSQQQSSNPNFIPYRDSKLTRILKDSLTGSCKTIMIANISPNSSSFEETHNTLKYAQRAKSIKT-QITKNVFASSTNLITQYNEIIKEQREEIKQLK 408          
BLAST of CX289804 vs. ExPASy Swiss-Prot
Match: KINH_CAEEL (Kinesin heavy chain OS=Caenorhabditis elegans GN=unc-116 PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 1.351e-28
Identity = 77/177 (43.50%), Postives = 107/177 (60.45%), Query Frame = 1
Query:    4 GTREVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALA-SKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETLCSLNFASRVRGIESGPARKQSDISELFKYKQMAEKLK 531
            G  EV + ++ G   R V  TN NE SSRSH +  +TVK E+    ++    L+LVDLAGSE+V K    G  L+E++ INKSL+ALG VISALA     H+PYR+SKLT ILQ SLGG+ +T + +  SPS  +  ET  +L F +R + I++     +   +E +K +   EK K
Sbjct:  178 GPDEVLQAIEDGKSNRMVAVTNMNEHSSRSHSVFLITVKQEHQTTKKQLTGKLYLVDLAGSEKVSKTGAQGTVLEEAKNINKSLTALGIVISALAEGTKSHVPYRDSKLTRILQESLGGNSRTTVIICASPSHFNEAETKSTLLFGARAKTIKNVVQINEELTAEEWKRRYEKEKEK 354          
BLAST of CX289804 vs. ExPASy Swiss-Prot
Match: KIF17_HUMAN (Kinesin-like protein KIF17 OS=Homo sapiens GN=KIF17 PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 1.351e-28
Identity = 77/176 (43.75%), Postives = 112/176 (63.64%), Query Frame = 1
Query:   25 LLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKTKSHLW-----LVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS-KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETLCSLNFASRVRGIESGPARKQSDISELFK-YKQMAEKLK 531
            ++++G + RSVG T  N+ SSRSH +  ++++   +   ++ K HL      LVDLAGSER  K    GERLKE+  IN SLSALG+VISAL   +  H+PYR+SKLT +LQ SLGG+ KTLM   +SP+ ++  ETL +L +A+R + I + P   +     L + Y++  +KLK
Sbjct:  188 IMETGWKNRSVGYTLMNKDSSRSHSIFTISIEMSAV--DERGKDHLRAGKLNLVDLAGSERQSKTGATGERLKEATKINLSLSALGNVISALVDGRCKHVPYRDSKLTRLLQDSLGGNTKTLMVACLSPADNNYDETLSTLRYANRAKNIRNKPRINEDPKDALLREYQEEIKKLK 361          
BLAST of CX289804 vs. ExPASy Swiss-Prot
Match: KIF27_RAT (Kinesin-like protein KIF27 OS=Rattus norvegicus GN=Kif27 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.304e-28
Identity = 82/199 (41.21%), Postives = 110/199 (55.28%), Query Frame = 1
Query:   13 EVWELLKSGARVRSVGSTNANELSSRSHCLLRVTV-----KGENLINGQKTK-----SHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS---KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETLCSLNFASRVRGIESGPARKQSDISELFKYKQMAEKLKQDEKETKKLQDNL 570
            +V  LL+ G   R  G+T  NE SSRSH +  ++V       E   +G+        S    VDLAGSERV K    GER KES  IN  L ALG+VISAL     KS H+PYR++K+T +L+ SLGG  KT+M   +SPSSSD  E+L SL +A+R R I + P            +   A+++ + E E K L++ L
Sbjct:  181 DVMGLLQVGNAARHTGTTQMNEHSSRSHAIFTISVCQVGKSAEATEDGEWCSHRHIVSKFHFVDLAGSERVTKTGNTGERFKESIQINSGLLALGNVISALGDPRRKSSHVPYRDAKITRLLKDSLGGSAKTVMITCVSPSSSDFDESLNSLKYANRARNIRNKPT---------LNFSPQADRMDEMEFEIKLLREAL 370          
BLAST of CX289804 vs. ExPASy Swiss-Prot
Match: KIP1_YEAST (Kinesin-like protein KIP1 OS=Saccharomyces cerevisiae GN=KIP1 PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.009e-28
Identity = 78/188 (41.49%), Postives = 108/188 (57.45%), Query Frame = 1
Query:   25 LLKSGARVRSVGSTNANELSSRSHCLLRVT---VKGENLINGQKTK----SHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALASKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETLCSLNFASRVRGIESGPARKQSDISE--LFKYKQMAEKLKQDEKETKKLQ 561
            LL  G+  R V +T  N+LSSRSH +  +T   V+ ++  +GQ         L LVDLAGSE + +   + +R +E+  INKSL  LG VI+AL   S HIPYR SKLT +LQ SLGG  KT +   ISP+   + ET  +L +A+R + I++ P   QS   +  L  Y Q  EKL+ D K ++  Q
Sbjct:  260 LLMQGSLKRKVAATKCNDLSSRSHTVFTITTNIVEQDSKDHGQNKNFVKIGKLNLVDLAGSENINRSGAENKRAQEAGLINKSLLTLGRVINALVDHSNHIPYRESKLTRLLQDSLGGMTKTCIIATISPAKISMEETASTLEYATRAKSIKNTPQVNQSLSKDTCLKDYIQEIEKLRNDLKNSRNKQ 447          
BLAST of CX289804 vs. ExPASy Swiss-Prot
Match: EG52_XENLA (Kinesin-related motor protein Eg5 2 OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.009e-28
Identity = 76/180 (42.22%), Postives = 113/180 (62.78%), Query Frame = 1
Query:   13 EVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-GENLINGQKTKS--HLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALASKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETLCSLNFASRVRGIESGPA--RKQSDISELFKYKQMAEKLKQD 537
            EV+++L+ GA  R   ST  N  SSRSH +  VT+   E  I+G++      L LVDLAGSE +G+     +R +E+  IN+SL  LG VI+AL  ++ HIPYR SKLT ILQ SLGG  KT +   +SP+S +L ET+ +L++ASR + I + P   +K +  + + +Y +  E+LK++
Sbjct:  209 EVYQILERGAAKRKTASTLMNAYSSRSHSVFSVTIHMKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERAPHIPYRESKLTRILQDSLGGRTKTSIIATVSPASINLEETMSTLDYASRAKNIMNKPEVNQKLTKKALIKEYTEEIERLKRE 388          
BLAST of CX289804 vs. ExPASy Swiss-Prot
Match: BIMC_EMENI (Kinesin-like protein bimC OS=Emericella nidulans GN=bimC PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 3.009e-28
Identity = 77/181 (42.54%), Postives = 107/181 (59.12%), Query Frame = 1
Query:   22 ELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-------GENLINGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALASKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETLCSLNFASRVRGIESGPARKQS--DISELFKYKQMAEKLKQD 537
            +LL+ G+  R V +T  N+LSSRSH +  +TV        GE  +   K    L LVDLAGSE +G+   + +R  E+  INKSL  LG VI+AL  KS HIPYR SKLT +LQ SLGG  KT +   ISP+ S+L ET+ +L++A R + I + P    +   ++ L ++    EKLK +
Sbjct:  269 KLLQQGSHKRQVAATKCNDLSSRSHTVFTITVNIKRTTESGEEYVCPGK----LNLVDLAGSENIGRSGAENKRATEAGLINKSLLTLGRVINALVDKSQHIPYRESKLTRLLQDSLGGRTKTCIIATISPARSNLEETISTLDYAFRAKNIRNKPQINSTMPKMTLLREFTAEIEKLKAE 445          
BLAST of CX289804 vs. ExPASy Swiss-Prot
Match: KIF27_HUMAN (Kinesin-like protein KIF27 OS=Homo sapiens GN=KIF27 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.704e-28
Identity = 82/194 (42.27%), Postives = 111/194 (57.22%), Query Frame = 1
Query:   13 EVWELLKSGARVRSVGSTNANELSSRSHCLLRVTV----------KGENLINGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS---KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETLCSLNFASRVRGIESGPA---RKQSD-ISEL-FKYKQMAEKLKQDE 540
            EV  LL+ G   R  G+T  NE SSRSH +  +++          +  +  + +   S    VDLAGSERV K    GER KES  IN  L ALG+VISAL     KS HIPYR++K+T +L+ SLGG  KT+M   +SPSSS+  E+L SL +A+R R I + P      +SD I E+ F+ K + E L+  +
Sbjct:  181 EVMSLLEMGNAARHTGTTQMNEHSSRSHAIFTISICQVHKNMEAAEDGSWYSPRHIVSKFHFVDLAGSERVTKTGNTGERFKESIQINSGLLALGNVISALGDPRRKSSHIPYRDAKITRLLKDSLGGSAKTVMITCVSPSSSNFDESLNSLKYANRARNIRNKPTVNFSPESDRIDEMEFEIKLLREALQSQQ 374          
BLAST of CX289804 vs. ExPASy Swiss-Prot
Match: KIF17_MOUSE (Kinesin-like protein KIF17 OS=Mus musculus GN=Kif17 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.704e-28
Identity = 77/176 (43.75%), Postives = 111/176 (63.07%), Query Frame = 1
Query:   25 LLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKTKSHLW-----LVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS-KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETLCSLNFASRVRGIESGPARKQSDISELFK-YKQMAEKLK 531
            ++++G + R+VG T  N+ SSRSH +  + +  E     ++ K HL      LVDLAGSER  K    GERLKE+  IN SLSALG+VISAL   +  HIPYR+SKLT +LQ SLGG+ KTLM   +SP+ ++  ETL +L +A+R + I++ P   +     L + Y++  ++LK
Sbjct:  188 VMETGWKNRAVGYTLMNKDSSRSHSIFTINI--EIYAVDERGKDHLRAGKLNLVDLAGSERQSKTGATGERLKEATKINLSLSALGNVISALVDGRCKHIPYRDSKLTRLLQDSLGGNTKTLMVACLSPADNNYDETLSTLRYANRAKNIKNKPRINEDPKDALLREYQEEIKRLK 361          
BLAST of CX289804 vs. ExPASy Swiss-Prot
Match: KIF11_MOUSE (Kinesin-like protein KIF11 OS=Mus musculus GN=Kif11 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.704e-28
Identity = 76/180 (42.22%), Postives = 112/180 (62.22%), Query Frame = 1
Query:   13 EVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-GENLINGQKTKS--HLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALASKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETLCSLNFASRVRGIESGPA--RKQSDISELFKYKQMAEKLKQD 537
            EV+++L+ GA  R+  +T  N  SSRSH +  VT+   E  I+G++      L LVDLAGSE +G+     +R +E+  IN+SL  LG VI+AL  ++ HIPYR SKLT ILQ SLGG  +T +   ISP+S +L ETL +L +A R + I + P   +K +  + + +Y +  E+LK+D
Sbjct:  208 EVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHIPYRESKLTRILQDSLGGRTRTSIIATISPASFNLEETLSTLEYAHRAKNIMNKPEVNQKLTKKALIKEYTEEIERLKRD 387          
The following BLAST results are available for this feature:
BLAST of CX289804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
KIF10_DICDI1.034e-2842.35Kinesin-related protein 10 OS=Dictyostelium discoi... [more]
KINH_CAEEL1.351e-2843.50Kinesin heavy chain OS=Caenorhabditis elegans GN=u... [more]
KIF17_HUMAN1.351e-2843.75Kinesin-like protein KIF17 OS=Homo sapiens GN=KIF1... [more]
KIF27_RAT2.304e-2841.21Kinesin-like protein KIF27 OS=Rattus norvegicus GN... [more]
KIP1_YEAST3.009e-2841.49Kinesin-like protein KIP1 OS=Saccharomyces cerevis... [more]
EG52_XENLA3.009e-2842.22Kinesin-related motor protein Eg5 2 OS=Xenopus lae... [more]
BIMC_EMENI3.009e-2842.54Kinesin-like protein bimC OS=Emericella nidulans G... [more]
KIF27_HUMAN6.704e-2842.27Kinesin-like protein KIF27 OS=Homo sapiens GN=KIF2... [more]
KIF17_MOUSE6.704e-2843.75Kinesin-like protein KIF17 OS=Mus musculus GN=Kif1... [more]
KIF11_MOUSE6.704e-2842.22Kinesin-like protein KIF11 OS=Mus musculus GN=Kif1... [more]

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Properties
Property NameValue
Genbank descriptionC02017C11SK IF1 Citrus clementina cDNA clone C02017C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289804 ID=CX289804; Name=CX289804; organism=Citrus clementina; type=EST; length=572bp
TTCGGCACGAGGGAAGTGTGGGAGCTACTTAAGTCTGGAGCCAGAGTTAG
ATCTGTTGGATCCACCAATGCCAATGAGCTCAGTAGCCGGTCTCACTGCT
TGTTGCGAGTAACTGTGAAGGGGGAGAATCTGATAAATGGGCAGAAGACT
AAGAGTCACCTCTGGCTGGTAGACTTGGCAGGCAGTGAACGTGTGGGGAA
GATTGAAGTTGATGGTGAGAGGTTGAAGGAATCTCAGTTTATAAATAAAT
CTCTCTCTGCACTTGGTGATGTTATATCTGCTCTGGCATCTAAATCAGGC
CACATTCCGTACAGGAACTCGAAGCTCACTCATATTTTGCAGAGCTCTCT
AGGTGGAGATTGCAAGACTCTGATGTTTGTCCAGATCAGCCCAAGTTCTT
CAGACCTTGGAGAGACCCTTTGTTCACTGAATTTTGCCAGCCGAGTTCGG
GGAATTGAAAGTGGTCCTGCTCGGAAACAATCAGACATTTCTGAACTTTT
TAAGTACAAGCAAATGGCAGAAAAGTTAAAGCAGGATGAGAAGGAGACGA
AGAAGTTGCAGGACAATTTGCA
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