CX289804

Overview
NameCX289804
Unique NameCX289804
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length572
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289804 vs. ExPASy Swiss-Prot
Match: KL61_DROME (Bipolar kinesin KRP-130 OS=Drosophila melanogaster GN=Klp61F PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 2.817e-26
Identity = 76/181 (41.99%), Postives = 108/181 (59.67%), Query Frame = 1
Query:   13 EVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-GENLINGQKTKS--HLWLVDLAGSERVGKIEVD-GERLKESQFINKSLSALGDVISALASKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETLCSLNFASRVRGIESGPA--RKQSDISELFKYKQMAEKLKQD 537
            +V++LL+ G   R   +T  N  SSRSH +  + V   EN I G+       L LVDLAGSE V K   + G R++E+  IN+SL  LG VI+AL  ++ H+PYR SKLT +LQ SLGG  KT +   ISP   D+ ETL +L +A R + I++ P   +K +  + L +Y +  +KLK+D
Sbjct:  205 DVYKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVHIRENGIEGEDMLKIGKLNLVDLAGSENVSKAGNEKGIRVRETVNINQSLLTLGRVITALVDRAPHVPYRESKLTRLLQESLGGRTKTSIIATISPGHKDIEETLSTLEYAHRAKNIQNKPEVNQKLTKKTVLKEYTEEIDKLKRD 385          
BLAST of CX289804 vs. ExPASy Swiss-Prot
Match: KIF3C_PONAB (Kinesin-like protein KIF3C OS=Pongo abelii GN=KIF3C PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.817e-26
Identity = 77/181 (42.54%), Postives = 107/181 (59.12%), Query Frame = 1
Query:   10 REVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-GENLINGQK--TKSHLWLVDLAGSERVGKIEVD------------------------GERLKESQFINKSLSALGDVISALA-SKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETLCSLNFASRVRGIESGP 468
            +E+  ++  G + R+VGST+ NE+SSRSH +  +TV+  E   +GQ       L LVDLAGSER  K   +                        GER KE+  IN SLSALG+VI+ALA ++S HIPYR+SKLT +LQ SLGG+ KT+M   + P+S    E+L +L FA+R + I++ P
Sbjct:  189 KEIEHVMNLGNQTRAVGSTHMNEVSSRSHAIFIITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNTAGGASTPSSGGSGGGGGSGGGAGGERPKEASKINLSLSALGNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRAKNIKNKP 369          
BLAST of CX289804 vs. ExPASy Swiss-Prot
Match: KIF3C_HUMAN (Kinesin-like protein KIF3C OS=Homo sapiens GN=KIF3C PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 2.817e-26
Identity = 77/181 (42.54%), Postives = 107/181 (59.12%), Query Frame = 1
Query:   10 REVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-GENLINGQK--TKSHLWLVDLAGSERVGKIEVD------------------------GERLKESQFINKSLSALGDVISALA-SKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETLCSLNFASRVRGIESGP 468
            +E+  ++  G + R+VGST+ NE+SSRSH +  +TV+  E   +GQ       L LVDLAGSER  K   +                        GER KE+  IN SLSALG+VI+ALA ++S HIPYR+SKLT +LQ SLGG+ KT+M   + P+S    E+L +L FA+R + I++ P
Sbjct:  189 KEIEHVMNLGNQTRAVGSTHMNEVSSRSHAIFIITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNTAGGAATPSSGGGGGGGGSGGGAGGERPKEASKINLSLSALGNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRAKNIKNKP 369          
BLAST of CX289804 vs. ExPASy Swiss-Prot
Match: KIF15_MOUSE (Kinesin-like protein KIF15 OS=Mus musculus GN=Kif15 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.817e-26
Identity = 79/186 (42.47%), Postives = 110/186 (59.14%), Query Frame = 1
Query:   13 EVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKGENLINGQKT----KSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS----KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETLCSLNFASRVRGIESGPA---RKQSDISEL-FKYKQMAEKLKQ 534
            E +++L  G R R V ST+ N  SSRSH +  +T+  E++    +T     S L LVDLAGSER      +G RLKE+  IN+SLS LG VI+AL      K  HI YR+SKLT +L+ SLGG+ KT +   + P S   GETL +LNFA R + I++        Q ++S+L  + K++ E+L Q
Sbjct:  210 ETYQVLSRGWRNRRVASTSMNRESSRSHAVFTITI--ESMEKSSETVNIRTSLLNLVDLAGSERQKDTHAEGMRLKEAGNINRSLSCLGQVITALVDVGNGKQRHICYRDSKLTFLLRDSLGGNAKTAIIANVHPGSRCFGETLSTLNFAQRAKLIKNKAVVNEDTQGNVSQLQAEVKRLKEQLSQ 393          
BLAST of CX289804 vs. ExPASy Swiss-Prot
Match: KI13A_HUMAN (Kinesin-like protein KIF13A OS=Homo sapiens GN=KIF13A PE=1 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 2.817e-26
Identity = 81/213 (38.03%), Postives = 117/213 (54.93%), Query Frame = 1
Query:   13 EVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVKG-----ENLINGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALA------SKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETLCSLNFASRVRGI--------------------ESGPARKQSDISELFKYKQMAEKLKQDEKETKKL 558
            ++  L+  G + R+V +TN NE SSRSH +  + +       ++  +G+K  S + LVDLAGSERV K    GERLKE   INKSL+ LG VIS+LA       KS  +PYR+S LT +L+ +LGG+ +T M   ISP++ +  ETL +L +A R + I                    E    R+Q   +E  K  ++ EKL++ EK  K+L
Sbjct:  195 DIESLMSEGNKSRTVAATNMNEESSRSHAVFNIIITQTLYDLQSGNSGEKV-SKVSLVDLAGSERVSKTGAAGERLKEGSNINKSLTTLGLVISSLADQAAGKGKSKFVPYRDSVLTWLLKDNLGGNSQTSMIATISPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNAKVIRELREEVEKLREQLSQAEAMKAPELKEKLEESEKLIKEL 406          
BLAST of CX289804 vs. ExPASy Swiss-Prot
Match: KIF3C_BOVIN (Kinesin-like protein KIF3C OS=Bos taurus GN=KIF3C PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.679e-26
Identity = 76/179 (42.46%), Postives = 107/179 (59.78%), Query Frame = 1
Query:   10 REVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-GENLINGQK--TKSHLWLVDLAGSERVGKIEVD----------------------GERLKESQFINKSLSALGDVISALA-SKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETLCSLNFASRVRGIESGP 468
            +E+  ++  G + R+VGST+ NE+SSRSH +  +TV+  E   +GQ       L LVDLAGSER  K   +                      GER KE+  IN SLSALG+VI+AL+ ++S HIPYR+SKLT +LQ SLGG+ KT+M   + P+S    E+L +L FA+R + I++ P
Sbjct:  189 KEIEHVMNLGNQTRAVGSTHMNEVSSRSHAIFVITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNTTGGTATQPTGGGGGGGGGGGGGERPKEASKINLSLSALGNVIAALSGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRAKNIKNKP 367          
BLAST of CX289804 vs. ExPASy Swiss-Prot
Match: KIF15_HUMAN (Kinesin-like protein KIF15 OS=Homo sapiens GN=KIF15 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.679e-26
Identity = 74/186 (39.78%), Postives = 106/186 (56.99%), Query Frame = 1
Query:   13 EVWELLKSGARVRSVGSTNANELSSRSHCLLRVTV----KGENLINGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS----KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETLCSLNFASRVRGIESGPARKQSDISELFKYKQMAEKLKQDEKE 546
            E +++L  G R R V ST+ N  SSRSH +  +T+    K   ++N +   S L LVDLAGSER      +G RLKE+  IN+SLS LG VI+AL      K  H+ YR+SKLT +L+ SLGG+ KT +   + P S   GETL +LNFA R + I++     +     + + +   ++LK+   E
Sbjct:  210 EAYQVLSGGWRNRRVASTSMNRESSRSHAVFTITIESMEKSNEIVNIRT--SLLNLVDLAGSERQKDTHAEGMRLKEAGNINRSLSCLGQVITALVDVGNGKQRHVCYRDSKLTFLLRDSLGGNAKTAIIANVHPGSRCFGETLSTLNFAQRAKLIKNKAVVNEDTQGNVSQLQAEVKRLKEQLAE 393          
BLAST of CX289804 vs. ExPASy Swiss-Prot
Match: KIF3C_RAT (Kinesin-like protein KIF3C OS=Rattus norvegicus GN=Kif3c PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.804e-26
Identity = 77/183 (42.08%), Postives = 107/183 (58.47%), Query Frame = 1
Query:   10 REVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-GENLINGQK--TKSHLWLVDLAGSERVGKIEVD--------------------------GERLKESQFINKSLSALGDVISALA-SKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETLCSLNFASRVRGIESGP 468
            +E+  ++  G + R+VGST+ NE+SSRSH +  +TV+  E   +GQ       L LVDLAGSER  K   +                          GER KE+  IN SLSALG+VI+ALA ++S HIPYR+SKLT +LQ SLGG+ KT+M   + P+S    E+L +L FA+R + I++ P
Sbjct:  189 KEIEHVMNLGNQARAVGSTHMNEVSSRSHAIFVITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNTPGGPATQSTAGGGGGGGGTSGSGSSGERPKEASKINLSLSALGNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRAKNIKNKP 371          
BLAST of CX289804 vs. ExPASy Swiss-Prot
Match: KIF3C_MOUSE (Kinesin-like protein KIF3C OS=Mus musculus GN=Kif3c PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 4.804e-26
Identity = 77/183 (42.08%), Postives = 107/183 (58.47%), Query Frame = 1
Query:   10 REVWELLKSGARVRSVGSTNANELSSRSHCLLRVTVK-GENLINGQK--TKSHLWLVDLAGSERVGKIEVD--------------------------GERLKESQFINKSLSALGDVISALA-SKSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETLCSLNFASRVRGIESGP 468
            +E+  ++  G + R+VGST+ NE+SSRSH +  +TV+  E   +GQ       L LVDLAGSER  K   +                          GER KE+  IN SLSALG+VI+ALA ++S HIPYR+SKLT +LQ SLGG+ KT+M   + P+S    E+L +L FA+R + I++ P
Sbjct:  189 KEIEHVMNLGNQARAVGSTHMNEVSSRSHAIFVITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNAAGGPATQPTAGGGSGSGSASGSASSGERPKEASKINLSLSALGNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRAKNIKNKP 371          
BLAST of CX289804 vs. ExPASy Swiss-Prot
Match: KIF15_RAT (Kinesin-like protein KIF15 OS=Rattus norvegicus GN=Kif15 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 4.804e-26
Identity = 78/186 (41.94%), Postives = 109/186 (58.60%), Query Frame = 1
Query:   13 EVWELLKSGARVRSVGSTNANELSSRSHCLLRVTV----KGENLINGQKTKSHLWLVDLAGSERVGKIEVDGERLKESQFINKSLSALGDVISALAS----KSGHIPYRNSKLTHILQSSLGGDCKTLMFVQISPSSSDLGETLCSLNFASRVRGIESGPA---RKQSDISEL-FKYKQMAEKLKQ 534
            E +++L  G R R V ST+ N  SSRSH +  +T+    K    +N +   S L LVDLAGSER      +G RLKE+  IN+SLS LG VI+AL      K  H+ YR+SKLT +L+ SLGG+ KT +   + P S   GETL +LNFA R + I++        Q ++S+L  + K++ E+L Q
Sbjct:  210 EAYQVLSRGWRNRRVASTSMNRESSRSHAVFTITIESMEKSSEAVNIRT--SLLNLVDLAGSERQKDTHAEGMRLKEAGNINRSLSCLGQVITALVDVGNGKQRHVCYRDSKLTFLLRDSLGGNAKTAIIANVHPGSRCFGETLSTLNFAQRAKLIKNKAVVNEDTQGNVSQLQAEVKRLREQLSQ 393          
The following BLAST results are available for this feature:
BLAST of CX289804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 194
Match NameE-valueIdentityDescription
KL61_DROME2.817e-2641.99Bipolar kinesin KRP-130 OS=Drosophila melanogaster... [more]
KIF3C_PONAB2.817e-2642.54Kinesin-like protein KIF3C OS=Pongo abelii GN=KIF3... [more]
KIF3C_HUMAN2.817e-2642.54Kinesin-like protein KIF3C OS=Homo sapiens GN=KIF3... [more]
KIF15_MOUSE2.817e-2642.47Kinesin-like protein KIF15 OS=Mus musculus GN=Kif1... [more]
KI13A_HUMAN2.817e-2638.03Kinesin-like protein KIF13A OS=Homo sapiens GN=KIF... [more]
KIF3C_BOVIN3.679e-2642.46Kinesin-like protein KIF3C OS=Bos taurus GN=KIF3C ... [more]
KIF15_HUMAN3.679e-2639.78Kinesin-like protein KIF15 OS=Homo sapiens GN=KIF1... [more]
KIF3C_RAT4.804e-2642.08Kinesin-like protein KIF3C OS=Rattus norvegicus GN... [more]
KIF3C_MOUSE4.804e-2642.08Kinesin-like protein KIF3C OS=Mus musculus GN=Kif3... [more]
KIF15_RAT4.804e-2641.94Kinesin-like protein KIF15 OS=Rattus norvegicus GN... [more]

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Properties
Property NameValue
Genbank descriptionC02017C11SK IF1 Citrus clementina cDNA clone C02017C11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289804 ID=CX289804; Name=CX289804; organism=Citrus clementina; type=EST; length=572bp
TTCGGCACGAGGGAAGTGTGGGAGCTACTTAAGTCTGGAGCCAGAGTTAG
ATCTGTTGGATCCACCAATGCCAATGAGCTCAGTAGCCGGTCTCACTGCT
TGTTGCGAGTAACTGTGAAGGGGGAGAATCTGATAAATGGGCAGAAGACT
AAGAGTCACCTCTGGCTGGTAGACTTGGCAGGCAGTGAACGTGTGGGGAA
GATTGAAGTTGATGGTGAGAGGTTGAAGGAATCTCAGTTTATAAATAAAT
CTCTCTCTGCACTTGGTGATGTTATATCTGCTCTGGCATCTAAATCAGGC
CACATTCCGTACAGGAACTCGAAGCTCACTCATATTTTGCAGAGCTCTCT
AGGTGGAGATTGCAAGACTCTGATGTTTGTCCAGATCAGCCCAAGTTCTT
CAGACCTTGGAGAGACCCTTTGTTCACTGAATTTTGCCAGCCGAGTTCGG
GGAATTGAAAGTGGTCCTGCTCGGAAACAATCAGACATTTCTGAACTTTT
TAAGTACAAGCAAATGGCAGAAAAGTTAAAGCAGGATGAGAAGGAGACGA
AGAAGTTGCAGGACAATTTGCA
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