CX289806
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289806 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.998e-29 Identity = 75/184 (40.76%), Postives = 121/184 (65.76%), Query Frame = 3 Query: 3 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQS--GRRLWDPKHE---NLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQS----EKMETMRKNGKMMEEEHNYL-KFVLRQQEIARQQQE 524 GRG++++KRIEN NRQVT+SKRR G+LKKA EI+VLCDA+V+L++++ GK+ +Y S + + ILE+Y R S R+L P+ + N S E R+K + + ++ RH GED+ +++PKEL LE L+ L IR +++ E + ++K K ++E+++ L K + +++I R QQE Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEY-STDSCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILRAQQE 184
BLAST of CX289806 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 5.812e-29 Identity = 78/184 (42.39%), Postives = 118/184 (64.13%), Query Frame = 3 Query: 3 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQS--GRRLWDPKHE---NLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQS----EKMETMRKNGKMMEEEHNYL--KFVLRQQEIARQQQ 521 GRGK+++KRIEN NRQVT+SKRRNG+LKKA EI+VLCDA+V+ I+++ GK+++Y + S + ILE+Y R S + L + E N +E ++K + + +Q +HL GED+ SLN KEL LE LE+ L I ++S E + ++K + ++EE+ L + V RQ+ + QQQ Sbjct: 2 GRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDS-RMDKILERYERYSYAEKALISAESESEGNWCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLEQQLESSLKHIISRKSHLMLESISELQKKERSLQEENKALQKELVERQKNVRGQQQ 184
BLAST of CX289806 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.691e-28 Identity = 74/184 (40.22%), Postives = 115/184 (62.50%), Query Frame = 3 Query: 3 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQS--GRRLWDPKHE---NLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSEKM-----ETMRKNGKMMEEEHNYLKFVLRQQEIARQQQE 524 GRG++++KRIEN NRQVT+SKRR G+LKKA EI+VLCDA+V+L++++ GK+ +Y S + + ILE+Y R S R+L P+ + N S E R+K + + ++ RH GED+ +++ KEL LE L+ L IR ++++ M E RK + E+ K + +++I R QQE Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEY-STDSCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQIKEREKILRAQQE 184
BLAST of CX289806 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.209e-28 Identity = 74/184 (40.22%), Postives = 119/184 (64.67%), Query Frame = 3 Query: 3 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQS--GRRLWDPKHENLSN---EIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQS----EKMETMRKNGKMMEEEHNYL--KFVLRQQEIARQQQ 521 GRG++++KRIEN NRQVT+SKRR+G+LKKA EI+VLCDA+V LI++++ GK+ +Y + S + +LE+Y R S R+L H + + E ++K + +Q +H GED+ SLN KEL LE L++ L IR +++ E + ++K + ++E++N L K R++E+A+Q Q Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDS-CMERLLERYERYSFAERQLVPTDHTSPGSWTLEHAKLKARLEVLQRNQKHYVGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEVAQQNQ 184
BLAST of CX289806 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.426e-28 Identity = 80/225 (35.56%), Postives = 130/225 (57.78%), Query Frame = 3 Query: 3 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDP-----KHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSE----KMETMRKNGKMMEEEHNYLKFVLR--------QQEIARQQQELAMENSVSAEIDYQRENHHDYAY-HVQPIQPNLQ 623 GRGKIEIKRIEN +NRQVT+ KRRNG+LKKA E++VLCDA+V+L+I+++ G++++Y + S+ +E+Y + + P + E +++R+ +Q RH+ GE + SLN KEL LE LE G+ +R K++E ++E M+K ++ + YL+ + QQE + Q E+ VS+ + + H++ Y V ++PN Q Sbjct: 17 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYA--NNSVRGTIERYKKACSDAVNPPSVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAEGARLNPDQQESSVIQGTTVYESGVSS---HDQSQHYNRNYIPVNLLEPNQQ 236
BLAST of CX289806 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.393e-28 Identity = 76/212 (35.85%), Postives = 124/212 (58.49%), Query Frame = 3 Query: 3 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHR--QSGRRLWDPKHENLSNEIE------RIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQS----EKMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMENSVSAEIDYQRENHHDYAYHVQ 602 GRG++E+KRIEN NRQVT++KRRNG+LKKA E++VLCDA+V+LII+++ GK++++CS S+S++ LE+Y + P E L+ E+ ++K D +Q R+L GED+ L+ KEL +LE L++ L IR ++ +++ ++ +M+ E + L+ +A Q N E+D+ +HH H Q Sbjct: 2 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-SSSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELESLERQLDSSLKQIRALRTQFMLDQLNDLQSKERMLTETNKTLRL-----RLADGYQMPLQLNPNQEEVDHYGRHHHQQQQHSQ 207
BLAST of CX289806 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.393e-28 Identity = 78/219 (35.62%), Postives = 126/219 (57.53%), Query Frame = 3 Query: 3 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDPKHENLSNEIE-------RIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQS----EKMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMENSVSAEIDYQRENHHDYA-YHVQPIQPNLQ 623 GRG++E+K IEN NRQVT++KRR +LKKA E++VLCDA+V+LII+++ GK++++CS STS++ LE+Y + + P+ +S E + ++K + +Q R+L GED+ L KEL LE L++ L IR ++ +++ +++ +M+ E + LK + A QQQ N+ + Q HH A YH +P LQ Sbjct: 2 GRGRVELKMIENKINRQVTFAKRRKRLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS-STSMLKTLEKYQKCN---FGSPESTIISRETQSSQQEYLKLKNRVEALQRSQRNLLGEDLGPLGSKELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEANKTLKRRFEESSQANQQQVWDPSNTHAVGYGRQPAQHHGEAFYHPLECEPTLQ 216
BLAST of CX289806 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 8.393e-28 Identity = 73/196 (37.24%), Postives = 123/196 (62.76%), Query Frame = 3 Query: 3 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQS--GRRLWDPKHE---NLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQS----EKMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMENSVSAEIDY 563 GRG++++KRIEN NRQVT+SKRR+G+LKKA EI+VLCDA+V LI++++ GK+ +Y + S + ILE+Y R S ++L H + + E ++K + +Q +H GED+ SL+ KEL LE L++ L IR +++ E + ++K + ++E++N L ++++E + QQ +S+ A D+ Sbjct: 2 GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDS-CMERILERYERYSFAEKQLVPTDHTSPVSWTLEHRKLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNNQLSKKVKEREKSAQQISGINSSSLFAHTDF 196
BLAST of CX289806 vs. ExPASy Swiss-Prot
Match: AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.432e-27 Identity = 68/197 (34.52%), Postives = 120/197 (60.91%), Query Frame = 3 Query: 3 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHR-----QSGRRLWDPKHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSE----KMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMENSVSAEIDYQ 566 GRGKIEIKRIEN +NRQVT+ KRRNG+LKKA E++VLCDA+V+LI+++S G++++Y + S +E+Y + + + + + E +++ + +Q + R++ GE +++L+ ++L LE +E G+ IR K++E ++E M+K + + YL+ + + E A+QQQ+ N + Y+ Sbjct: 18 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKAT--IERYKKACSDSSNTGSISEANAQYYQQEASKLRAQIGNLQNQNRNMLGESLAALSLRDLKNLEQKIEKGISKIRSKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETERAQQQQQQQQMNLMPGSSSYE 212
BLAST of CX289806 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.432e-27 Identity = 77/217 (35.48%), Postives = 126/217 (58.06%), Query Frame = 3 Query: 3 GRGKIEIKRIENASNRQVTYSKRRNGILKKAKEITVLCDAKVSLIIYASSGKMHDYCSPSTSLVDILEQYHRQSGRRLWDP-----KHENLSNEIERIKRENDRMQIKLRHLNGEDISSLNPKELIALEDALENGLVSIRDKQSE----KMETMRKNGKMMEEEHNYLKFVLRQQEIARQQQELAMENSVSAEIDYQRENHHDYAYHVQPIQPNLQE 626 GRGKIEIKRIEN +NRQVT+ KRRNG+LKKA E++VLCDA+V+L+I+++ G++++Y + S+ +E+Y + + P + E +++R+ +Q RH+ GE + SLN KEL LE LE G+ +R K+ E ++E M+K ++ ++ YL+ + ++ QQQE ++ + + +H Y+ I NL E Sbjct: 17 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYA--NNSVRGTIERYKKACSDAVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKITER-TGLQQQESSVIHQGTVYESGVTSSHQSGQYNRNYIAVNLLE 230 The following BLAST results are available for this feature:
BLAST of CX289806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 116
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289806 ID=CX289806; Name=CX289806; organism=Citrus clementina; type=EST; length=743bpback to top |