CX289862
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289862 vs. ExPASy Swiss-Prot
Match: RL18_BOVIN (60S ribosomal protein L18 OS=Bos taurus GN=RPL18 PE=2 SV=3) HSP 1 Score: 126.331 bits (316), Expect = 1.231e-28 Identity = 61/88 (69.32%), Postives = 70/88 (79.55%), Query Frame = 2 Query: 2 VTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFR 265 V ALR + AR+RI KAGG+ LTFDQLAL +P G TVLL GP+ RE +HFG APG PHSHTKPYVRSKGRKFERARG+R SRG++ Sbjct: 100 VCALRVSSRARSRILKAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRRASRGYK 187
BLAST of CX289862 vs. ExPASy Swiss-Prot
Match: RL18B_XENLA (60S ribosomal protein L18-B OS=Xenopus laevis GN=rpl18-B PE=2 SV=4) HSP 1 Score: 125.561 bits (314), Expect = 2.100e-28 Identity = 60/88 (68.18%), Postives = 70/88 (79.55%), Query Frame = 2 Query: 2 VTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFR 265 V AL+ T R+RI K+GG+ +TFDQLAL AP GQNTVLL GP+ ARE +HFG APG PHS TKPYV SKGRKFERARG+R SRG++ Sbjct: 100 VCALKITSGDRSRILKSGGQIMTFDQLALAAPKGQNTVLLSGPRKAREVYRHFGKAPGTPHSRTKPYVLSKGRKFERARGRRASRGYK 187
BLAST of CX289862 vs. ExPASy Swiss-Prot
Match: RL18B_SCHPO (60S ribosomal protein L18-B OS=Schizosaccharomyces pombe GN=rpl18b PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.677e-28 Identity = 64/89 (71.91%), Postives = 71/89 (79.78%), Query Frame = 2 Query: 2 VTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV 268 V ALRFT++ARARI KAGGE LT DQLALRAP G NTVLLRG K+AREA +HFG PH H PYVRS+GRKFERARG+R SR F+V Sbjct: 102 VAALRFTKSARARILKAGGEVLTLDQLALRAPTGSNTVLLRGKKHAREAYRHFGFG---PHKHKAPYVRSEGRKFERARGRRKSRAFKV 187
BLAST of CX289862 vs. ExPASy Swiss-Prot
Match: RL18A_SCHPO (60S ribosomal protein L18-A OS=Schizosaccharomyces pombe GN=rpl18a PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.361e-27 Identity = 62/89 (69.66%), Postives = 71/89 (79.78%), Query Frame = 2 Query: 2 VTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV 268 + ALRFT++ARARI KAGGE LT DQLALRAP G NTVL+RG K+AREA +HFG PH H PYVRS+GRKFERARG+R SR F+V Sbjct: 102 IAALRFTKSARARILKAGGEVLTLDQLALRAPTGSNTVLVRGKKHAREAYRHFGFG---PHKHKAPYVRSEGRKFERARGRRKSRAFKV 187
BLAST of CX289862 vs. ExPASy Swiss-Prot
Match: RL18_AEDAE (60S ribosomal protein L18 OS=Aedes aegypti GN=RpL18 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 5.171e-27 Identity = 59/88 (67.05%), Postives = 72/88 (81.82%), Query Frame = 2 Query: 2 VTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFR 265 V ALR TE AR RI K GG+ TFDQLAL AP G+NTVL++G + AREA HFG APGVPHS+T+PYV+SKGRK+E+ARG+R+S GF+ Sbjct: 101 VCALRVTEKARERILKWGGKIYTFDQLALVAPTGKNTVLMQGERTAREAFTHFGRAPGVPHSNTRPYVQSKGRKYEKARGRRSSCGFK 188
BLAST of CX289862 vs. ExPASy Swiss-Prot
Match: RL18_ANOGA (60S ribosomal protein L18 OS=Anopheles gambiae GN=RpL18 PE=3 SV=3) HSP 1 Score: 120.168 bits (300), Expect = 8.821e-27 Identity = 57/88 (64.77%), Postives = 72/88 (81.82%), Query Frame = 2 Query: 2 VTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFR 265 V ALR T+ AR RI K GG+ TFDQLAL +P G+NTVL++G + ARE KHFG APGVPHS+T+PYV+SKGRKFE+ARG+R+S G++ Sbjct: 101 VCALRVTDKARQRILKNGGKIYTFDQLALLSPTGRNTVLMQGKRTAREVFKHFGRAPGVPHSNTRPYVQSKGRKFEKARGRRSSCGYK 188
BLAST of CX289862 vs. ExPASy Swiss-Prot
Match: RL18_YEAST (60S ribosomal protein L18 OS=Saccharomyces cerevisiae GN=RPL18A PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.567e-26 Identity = 58/89 (65.17%), Postives = 70/89 (78.65%), Query Frame = 2 Query: 2 VTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNSRGFRV 268 V ALRFT ARA+I KAGGEC+T DQLA+RAP GQNT++LRGP+N+REAV+HFG PH P + S GRKFERARG+R S+GF+V Sbjct: 101 VAALRFTAGARAKIVKAGGECITLDQLAVRAPKGQNTLILRGPRNSREAVRHFGMG---PHKGKAPRILSTGRKFERARGRRRSKGFKV 186
BLAST of CX289862 vs. ExPASy Swiss-Prot
Match: RL18_SPOFR (60S ribosomal protein L18 OS=Spodoptera frugiperda GN=RpL18 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.718e-26 Identity = 61/84 (72.62%), Postives = 66/84 (78.57%), Query Frame = 2 Query: 2 VTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNS 253 V AL TE ARARI AGGE LTFDQLALRAP G TVLL+G +NAREAV+HFGPAPG P SHTKPYVR+KG ERAR +R S Sbjct: 100 VAALHVTEKARARILAAGGEILTFDQLALRAPTGAKTVLLQGRRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--ERARPRRRS 181
BLAST of CX289862 vs. ExPASy Swiss-Prot
Match: RL18_PLUXY (60S ribosomal protein L18 OS=Plutella xylostella GN=RpL18 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.173e-25 Identity = 59/84 (70.24%), Postives = 66/84 (78.57%), Query Frame = 2 Query: 2 VTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNS 253 V AL TE ARARI AGGE LTFDQLALRAP G+ TVL++G +NAREAV+HFGPAPG P SHTKPYVRSKG E+A+ R S Sbjct: 100 VAALHVTEKARARILDAGGEILTFDQLALRAPTGRKTVLIQGQRNAREAVRHFGPAPGAPRSHTKPYVRSKGH--EQAKPSRRS 181
BLAST of CX289862 vs. ExPASy Swiss-Prot
Match: RL18_BOMMO (60S ribosomal protein L18 OS=Bombyx mori GN=RpL18 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.840e-25 Identity = 58/84 (69.05%), Postives = 66/84 (78.57%), Query Frame = 2 Query: 2 VTALRFTETARARIEKAGGECLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRKFERARGKRNS 253 V AL TE ARARI AGGE LTFDQLALRAP G+ TVL++G +NAREAV+HFGPAPG P SHTKPYVR+KG E+AR R + Sbjct: 100 VAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGH--EKARPSRRA 181 The following BLAST results are available for this feature:
BLAST of CX289862 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289862 ID=CX289862; Name=CX289862; organism=Citrus clementina; type=EST; length=626bpback to top |