CX289866

Overview
NameCX289866
Unique NameCX289866
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289866 vs. ExPASy Swiss-Prot
Match: CDC2A_ANTMA (Cell division control protein 2 homolog A OS=Antirrhinum majus GN=CDC2A PE=2 SV=2)

HSP 1 Score: 221.09 bits (562), Expect = 4.571e-57
Identity = 113/222 (50.90%), Postives = 145/222 (65.32%), Query Frame = 1
Query:   34 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIF 699
            ME+YEK+EK+GEGTYG VYKA+D+ T + +ALKK RLE ++EG+P TA+RE+SLL+ +     +VRL  V H                        +  LYLVFEYLD DLKK +DS  +        P L++ FLYQ+ +G+A+CHSH VLHRDLKPQN               GL RAF +P++++THE+VTLWYRAPE+LLGS HYST VD+WSVGCIF
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVH-----------------------SEKRLYLVFEYLDLDLKKHMDSCPEFSQD----PRLVKMFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIF 194          
BLAST of CX289866 vs. ExPASy Swiss-Prot
Match: CDC22_MEDSA (Cell division control protein 2 homolog 2 OS=Medicago sativa GN=CDC2B PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 5.969e-57
Identity = 115/222 (51.80%), Postives = 146/222 (65.77%), Query Frame = 1
Query:   34 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIF 699
            ME+YEK+EK+GEGTYG VYKA+D+AT + +ALKK RLE ++EG+P TA+RE+SLL+ + Q   +VRL  V H                        +  LYLVFEYLD DLKKF+DS  +    +      I+ FLYQ+  G+A+CHSH VLHRDLKPQN               GL RAF +P++++THE+VTLWYRAPE+LLGS HYST VD+WSVGCIF
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKARDRATNETIALKKIRLEQEDEGVPSTAIREISLLKEM-QHRNIVRLQDVVH-----------------------SEKRLYLVFEYLDLDLKKFMDSSPEFAKDQ----RQIKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRSSNAVKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIF 194          
BLAST of CX289866 vs. ExPASy Swiss-Prot
Match: CDC2_CHERU (Cell division control protein 2 homolog OS=Chenopodium rubrum GN=CDC2 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.018e-56
Identity = 113/222 (50.90%), Postives = 144/222 (64.86%), Query Frame = 1
Query:   34 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIF 699
            M++YEK+EK+GEGTYG VYKA+DK T + +ALKK RLE ++EG+P TA+RE+SLL+ +     +VRL  V H                        +  LYLVFEYLD DLKK +DS           P +I+ FLYQ+ +G+A+CHSH VLHRDLKPQN               GL RAF +P++++THE+VTLWYRAPE+LLGS HYST VD+WSVGCIF
Sbjct:    1 MDQYEKVEKIGEGTYGVVYKARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHG-NIVRLQDVVH-----------------------SEKRLYLVFEYLDLDLKKHMDSCPDFAKD----PRMIKRFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRQTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIF 194          
BLAST of CX289866 vs. ExPASy Swiss-Prot
Match: CDKA2_ORYSJ (Cyclin-dependent kinase A-2 OS=Oryza sativa subsp. japonica GN=CDKA-2 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.737e-56
Identity = 113/222 (50.90%), Postives = 145/222 (65.32%), Query Frame = 1
Query:   34 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIF 699
            ME+YEK+EK+GEGTYG VYK K + T + +ALKK RLE ++EG+P TA+RE+SLL+ + Q   +VRL  V H +  +                       YLVFEYLD DLKK +DS     N R     +++SFLYQ+ +G+A+CHSH VLHRDLKPQN               GL RAF +P++++THE+VTLWYRAPE+LLG+ HYST VDMWSVGCIF
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKGKHRHTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-QHRNIVRLQDVVHKEKCI-----------------------YLVFEYLDLDLKKHMDSSPDFKNHR-----IVKSFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARHYSTPVDMWSVGCIF 193          
BLAST of CX289866 vs. ExPASy Swiss-Prot
Match: CDC2_VIGAC (Cell division control protein 2 homolog OS=Vigna aconitifolia GN=CDC2 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.869e-56
Identity = 113/222 (50.90%), Postives = 144/222 (64.86%), Query Frame = 1
Query:   34 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIF 699
            ME+YEK+EK+GEGTYG VYKA+D+ T + +ALKK RLE ++EG+P TA+RE+SLL+ + Q   +VRL  V H                        +  LYLVFEYLD DLKK +DS  +        P  ++ FLYQ+  G+A+CHSH VLHRDLKPQN               GL RAF +P++++THE+VTLWYRAPE+LLGS HYST VD+WSVGCIF
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEM-QHRNIVRLQDVVH-----------------------SEKRLYLVFEYLDLDLKKHMDSSPEFVKD----PRQVKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIF 194          
BLAST of CX289866 vs. ExPASy Swiss-Prot
Match: CDC2_VIGUN (Cell division control protein 2 homolog OS=Vigna unguiculata GN=CDC2 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 8.620e-56
Identity = 112/222 (50.45%), Postives = 144/222 (64.86%), Query Frame = 1
Query:   34 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIF 699
            ME+YEK+EK+GEGTYG VYKA+D+ T + +ALKK RLE ++EG+P TA+RE+SLL+ + Q   +VRL  V H                        +  LYLVFEYLD DLKK +DS  +        P  ++ FLYQ+  G+A+CHSH VLHRDLKPQN               GL RAF +P++++THE+VTLWYRAPE+LLGS HYST VD+WSVGC+F
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKARDRVTDETIALKKIRLEQEDEGVPSTAIREISLLKEM-QHRNIVRLQDVVH-----------------------SEKRLYLVFEYLDLDLKKHMDSSPEFVKD----PRQVKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCLF 194          
BLAST of CX289866 vs. ExPASy Swiss-Prot
Match: CDKA1_ARATH (Cyclin-dependent kinase A-1 OS=Arabidopsis thaliana GN=CDKA-1 PE=1 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.470e-55
Identity = 111/222 (50.00%), Postives = 145/222 (65.32%), Query Frame = 1
Query:   34 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIF 699
            M++YEK+EK+GEGTYG VYKA+DK T + +ALKK RLE ++EG+P TA+RE+SLL+ +  S  +V+L  V H                        +  LYLVFEYLD DLKK +DS         +    I+++LYQ+ +G+A+CHSH VLHRDLKPQN               GL RAF +P++++THE+VTLWYRAPE+LLGS HYST VD+WSVGCIF
Sbjct:    1 MDQYEKVEKIGEGTYGVVYKARDKVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHS-NIVKLQDVVH-----------------------SEKRLYLVFEYLDLDLKKHMDSTPDFSKDLHM----IKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSHHYSTPVDIWSVGCIF 194          
BLAST of CX289866 vs. ExPASy Swiss-Prot
Match: CDK3_HUMAN (Cell division protein kinase 3 OS=Homo sapiens GN=CDK3 PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.245e-54
Identity = 115/222 (51.80%), Postives = 147/222 (66.22%), Query Frame = 1
Query:   34 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIF 699
            M+ ++K+EK+GEGTYG VYKAK++ TGQLVALKK RL+++ EG+P TA+RE+SLL+ L     +VRLL V H                        +  LYLVFE+L  DLKK++DS         LP  LI+S+L+QL +GV+ CHSH V+HRDLKPQN               GL RAF VPL++YTHE+VTLWYRAPE+LLGS  Y+TAVD+WS+GCIF
Sbjct:    1 MDMFQKVEKIGEGTYGVVYKAKNRETGQLVALKKIRLDLEMEGVPSTAIREISLLKELKHP-NIVRLLDVVH-----------------------NERKLYLVFEFLSQDLKKYMDSTPGSE----LPLHLIKSYLFQLLQGVSFCHSHRVIHRDLKPQNLLINELGAIKLADF-GLARAFGVPLRTYTHEVVTLWYRAPEILLGSKFYTTAVDIWSIGCIF 193          
BLAST of CX289866 vs. ExPASy Swiss-Prot
Match: CDK2_RAT (Cell division protein kinase 2 OS=Rattus norvegicus GN=Cdk2 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.123e-54
Identity = 114/222 (51.35%), Postives = 148/222 (66.67%), Query Frame = 1
Query:   34 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIF 699
            ME ++K+EK+GEGTYG VYKAK+K TG++VALKK RL+ + EG+P TA+RE+SLL+ L+    +V+LL V H ++ L                       YLVFE+L  DLKKF+D+      P PL    I+S+L+QL +G+A CHSH VLHRDLKPQN               GL RAF VP+++YTHE+VTLWYRAPE+LLG  +YSTAVD+WS+GCIF
Sbjct:    1 MENFQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-NIVKLLDVIHTENKL-----------------------YLVFEFLHQDLKKFMDASALTGLPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAEGSIKLADF-GLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIF 193          
BLAST of CX289866 vs. ExPASy Swiss-Prot
Match: CDK2_MOUSE (Cell division protein kinase 2 OS=Mus musculus GN=Cdk2 PE=1 SV=2)

HSP 1 Score: 212.231 bits (539), Expect = 2.123e-54
Identity = 114/222 (51.35%), Postives = 148/222 (66.67%), Query Frame = 1
Query:   34 MEKYEKLEKVGEGTYGKVYKAKDKATGQLVALKKTRLEMDEEGIPPTALREVSLLQMLSQSLYVVRLLCVEHVDSSLKSNNPSPDSASAFATSNNGKSNLYLVFEYLDTDLKKFIDSHRKGPNPRPLPPTLIQSFLYQLCKGVAHCHSHGVLHRDLKPQNXXXXXXXXXXXXXXXGLGRAFTVPLKSYTHEIVTLWYRAPEVLLGSTHYSTAVDMWSVGCIF 699
            ME ++K+EK+GEGTYG VYKAK+K TG++VALKK RL+ + EG+P TA+RE+SLL+ L+    +V+LL V H ++ L                       YLVFE+L  DLKKF+D+      P PL    I+S+L+QL +G+A CHSH VLHRDLKPQN               GL RAF VP+++YTHE+VTLWYRAPE+LLG  +YSTAVD+WS+GCIF
Sbjct:    1 MENFQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP-NIVKLLDVIHTENKL-----------------------YLVFEFLHQDLKKFMDASALTGIPLPL----IKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAEGSIKLADF-GLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIF 193          
The following BLAST results are available for this feature:
BLAST of CX289866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2A_ANTMA4.571e-5750.90Cell division control protein 2 homolog A OS=Antir... [more]
CDC22_MEDSA5.969e-5751.80Cell division control protein 2 homolog 2 OS=Medic... [more]
CDC2_CHERU1.018e-5650.90Cell division control protein 2 homolog OS=Chenopo... [more]
CDKA2_ORYSJ1.737e-5650.90Cyclin-dependent kinase A-2 OS=Oryza sativa subsp.... [more]
CDC2_VIGAC3.869e-5650.90Cell division control protein 2 homolog OS=Vigna a... [more]
CDC2_VIGUN8.620e-5650.45Cell division control protein 2 homolog OS=Vigna u... [more]
CDKA1_ARATH1.470e-5550.00Cyclin-dependent kinase A-1 OS=Arabidopsis thalian... [more]
CDK3_HUMAN1.245e-5451.80Cell division protein kinase 3 OS=Homo sapiens GN=... [more]
CDK2_RAT2.123e-5451.35Cell division protein kinase 2 OS=Rattus norvegicu... [more]
CDK2_MOUSE2.123e-5451.35Cell division protein kinase 2 OS=Mus musculus GN=... [more]

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Properties
Property NameValue
Genbank descriptionC02018A01SK IF1 Citrus clementina cDNA clone C02018A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289866 ID=CX289866; Name=CX289866; organism=Citrus clementina; type=EST; length=701bp
AAATTCTAGGGTTCGCAGAGCAGAACAGAGAGGATGGAGAAGTACGAGAA
GCTAGAGAAGGTGGGAGAAGGAACGTACGGGAAAGTGTACAAGGCAAAGG
ACAAAGCGACCGGGCAGTTGGTTGCTCTGAAGAAAACAAGACTCGAAATG
GACGAAGAAGGCATCCCCCCGACCGCTCTCCGCGAAGTGTCCCTCCTCCA
GATGCTCTCTCAATCCCTTTACGTCGTCCGCCTCCTCTGCGTCGAACACG
TGGACTCCTCTCTCAAATCCAACAACCCCAGCCCCGACTCCGCTTCCGCC
TTCGCCACCTCCAACAACGGCAAGTCTAATCTCTATCTCGTGTTTGAATA
CCTCGATACCGATCTAAAGAAATTCATCGACTCGCACCGCAAGGGCCCCA
ATCCGAGGCCGCTGCCCCCCACTCTCATTCAGAGCTTCTTGTACCAGCTT
TGCAAAGGCGTCGCCCACTGCCACAGCCACGGTGTCCTTCATCGCGACCT
GAAGCCGCAGAATCTTCTCCTTGATAAGGACAAGGGGATTCTCAAGATCG
CCGATCTTGGCCTCGGACGCGCCTTCACCGTTCCTCTCAAAAGCTATACC
CACGAGATTGTTACTCTCTGGTATAGGGCTCCCGAGGTGCTTCTTGGTTC
CACTCATTACTCCACTGCTGTCGACATGTGGTCCGTTGGTTGCATTTTCG
C
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