CX289878

Overview
NameCX289878
Unique NameCX289878
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length722
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289878 vs. ExPASy Swiss-Prot
Match: CDPK2_ORYSJ (Calcium-dependent protein kinase isoform 2 OS=Oryza sativa subsp. japonica GN=CPK2 PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 5.883e-31
Identity = 70/154 (45.45%), Postives = 97/154 (62.99%), Query Frame = 3
Query:   12 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAG 473
            K AL+V+A  L+ EE+ GLK+ F  MDT+  G I               + EA+++ LMEAADVDG+GS++Y EF+  ++H  K+  DEHL KAF +FD++ SGFI  +EL +AL  E +      I  I+ +VDTD DGRI+YEEF  MM+ G
Sbjct:  372 KMALKVIASNLNEEEIKGLKQMFTNMDTDNSGTITYEELKAGLAKLGSKLSEAEVKQLMEAADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQYFDKDNSGFITRDELESAL-IEHEMGDTSTIKDIISEVDTDNDGRINYEEFCAMMRGG 524          
BLAST of CX289878 vs. ExPASy Swiss-Prot
Match: CDPK2_MAIZE (Calcium-dependent protein kinase 2 OS=Zea mays GN=CPK2 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 5.883e-31
Identity = 70/154 (45.45%), Postives = 97/154 (62.99%), Query Frame = 3
Query:   12 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAG 473
            K AL+V+A  L+ EE+ GLK+ F  MDT+  G I               + EA+++ LMEAADVDG+GS++Y EF+  ++H  K+  DEHL KAF +FD++ SGFI  +EL +AL  E +      I  I+ +VDTD DGRI+YEEF  MM+ G
Sbjct:  353 KMALKVIASNLNEEEIKGLKQMFMNMDTDNSGTITYEELKAGLAKLGSKLSEAEVKQLMEAADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQYFDKDNSGFITRDELESAL-IEHEMGDTSTIREIISEVDTDNDGRINYEEFCAMMRGG 505          
BLAST of CX289878 vs. ExPASy Swiss-Prot
Match: CDPKY_ARATH (Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana GN=CPK34 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.683e-31
Identity = 69/154 (44.81%), Postives = 97/154 (62.99%), Query Frame = 3
Query:   12 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAG 473
            K AL+V+A  LS EE+ GLKE F+ MDT+  G I               + E ++Q LMEAAD DG+G+++YGEF+A ++H+ ++  +EHL+ AF  FD++ SG+I  EEL  AL +     G D I  I+ +VD D DGRI+YEEF  MM+ G
Sbjct:  356 KVALRVIAGCLSEEEIMGLKEMFKGMDTDNSGTITLEELRQGLAKQGTRLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNSGYITTEELEQALREFGMNDGRD-IKEIISEVDGDNDGRINYEEFVAMMRKG 508          
BLAST of CX289878 vs. ExPASy Swiss-Prot
Match: CDPKH_ARATH (Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana GN=CPK17 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.003e-30
Identity = 68/154 (44.16%), Postives = 98/154 (63.64%), Query Frame = 3
Query:   12 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAG 473
            K AL+V+A  LS EE+ GLKE F+ MDT+  G I               + E ++Q LMEAAD DG+G+++YGEF+A ++H+ ++  +EHL+ AF  FD++ SG+I +EEL  AL +     G D I  I+ +VD D DGRI+Y+EF  MM+ G
Sbjct:  361 KVALRVIAGCLSEEEIMGLKEMFKGMDTDSSGTITLEELRQGLAKQGTRLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDREEHLYSAFQHFDKDNSGYITMEELEQALREFGMNDGRD-IKEIISEVDGDNDGRINYDEFVAMMRKG 513          
BLAST of CX289878 vs. ExPASy Swiss-Prot
Match: CDPK2_ARATH (Calcium-dependent protein kinase 2 OS=Arabidopsis thaliana GN=CPK2 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.235e-30
Identity = 69/156 (44.23%), Postives = 100/156 (64.10%), Query Frame = 3
Query:   12 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV-INAIMHDVDTDKDGRISYEEFAVMMKAGT 476
            K AL+V+AE LS EE+AGLK+ F+M+D +  G+I              N+ E+++  LM+AADVD  G+++Y EF+A ++HL K+  ++HL  AFS+FD++ SGFI  +EL+ A     +   ED  I  +M DVD DKDGRI Y EF  MM+ G+
Sbjct:  474 KMALRVIAESLSEEEIAGLKQMFKMIDADNSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFSYFDKDESGFITPDELQQACE---EFGVEDARIEEMMRDVDQDKDGRIDYNEFVAMMQKGS 626          
BLAST of CX289878 vs. ExPASy Swiss-Prot
Match: CDPK1_ARATH (Calcium-dependent protein kinase 1 OS=Arabidopsis thaliana GN=CPK1 PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.235e-30
Identity = 75/177 (42.37%), Postives = 109/177 (61.58%), Query Frame = 3
Query:   12 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDV-INAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRERFNSISLKL 539
            K AL+V+AE LS EE+AGLKE F M+D +K G+I              N+ E+++  LM+AADVD  G+++Y EF+A ++HL K+  ++HL  AF++FD++ SG+I  +EL+ A     +   EDV I  +M DVD D DGRI Y EF  MM+ G+      +    + F SI+LKL
Sbjct:  438 KMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACE---EFGVEDVRIEELMRDVDQDNDGRIDYNEFVAMMQKGSITGGPVKMGLEKSF-SIALKL 610          
BLAST of CX289878 vs. ExPASy Swiss-Prot
Match: CDPKT_ARATH (Calcium-dependent protein kinase 29 OS=Arabidopsis thaliana GN=CPK29 PE=2 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 3.813e-30
Identity = 66/155 (42.58%), Postives = 103/155 (66.45%), Query Frame = 3
Query:   12 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGT 476
            K AL+V+AE LS EE+ GLK+ F+ MDT++ G I               + E++++ LMEAADVD  G+++Y EFV  ++H  ++  +E+L +AF +FD++RSGFI  +EL++++  E     +  I+ +++DVDTD DGRI+YEEF  MM+ GT
Sbjct:  372 KLALKVIAENLSEEEIKGLKQTFKNMDTDESGTITFDELRNGLHRLGSKLTESEIKQLMEAADVDKSGTIDYIEFVTATMHRHRLEKEENLIEAFKYFDKDRSGFITRDELKHSMT-EYGMGDDATIDEVINDVDTDNDGRINYEEFVAMMRKGT 525          
BLAST of CX289878 vs. ExPASy Swiss-Prot
Match: CDPK5_SOLTU (Calcium-dependent protein kinase 5 OS=Solanum tuberosum GN=CPK5 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.813e-30
Identity = 68/156 (43.59%), Postives = 97/156 (62.18%), Query Frame = 3
Query:   12 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDE--VDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAG 473
            K AL+V+AE LS EE+AGLKE F+ MDT+  G I               + + +++ LM+AADVD  G+++YGEF+A ++HL K+  +EHL  AF +FD++ SG+I ++EL+ A  D    D   ED+I     +VD D DGRI Y EF  MM+ G
Sbjct:  360 KMALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRKYGSTLKDIEIRELMDAADVDNSGTIDYGEFIAATIHLNKLDREEHLMAAFQYFDKDGSGYITVDELQQACADHNITDVFFEDII----REVDQDNDGRIDYGEFVAMMQKG 511          
BLAST of CX289878 vs. ExPASy Swiss-Prot
Match: CDPKQ_ARATH (Calcium-dependent protein kinase 26 OS=Arabidopsis thaliana GN=CPK26 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.109e-29
Identity = 72/174 (41.38%), Postives = 106/174 (60.92%), Query Frame = 3
Query:   18 ALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDE--VDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQYSRE-RFNSIS 530
            AL+V+AE LS EE+AGLKE F+ MDT+  G I               + + +++ LMEAAD+D  G+++YGEF+A ++HL K+  +EHL  AF +FD++ SG+I I+EL++A  ++   D   EDVI     +VD D DGRI Y EF  MM+ G   R   +  +   R N++S
Sbjct:  314 ALRVIAESLSEEEIAGLKEMFKAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMEAADIDKSGTIDYGEFIAATIHLNKLEREEHLLSAFRYFDKDGSGYITIDELQHACAEQGMSDVFLEDVIK----EVDQDNDGRIDYGEFVAMMQKGIVGRTMRKSINMSIRNNAVS 483          
BLAST of CX289878 vs. ExPASy Swiss-Prot
Match: CDPK9_ARATH (Calcium-dependent protein kinase 9 OS=Arabidopsis thaliana GN=CPK9 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.449e-29
Identity = 65/164 (39.63%), Postives = 103/164 (62.80%), Query Frame = 3
Query:   12 KRALQVVAEFLSVEEVAGLKEAFEMMDTNKRGKINXXXXXXXXXXXXQNIPEADLQILMEAADVDGDGSLNYGEFVAVSVHLKKMANDEHLHKAFSFFDRNRSGFIEIEELRNALNDEVDTSGEDVINAIMHDVDTDKDGRISYEEFAVMMKAGTDWRKASRQY 503
            K AL+V+AE +  EE+ GLK  F  +DT+  G I               + EA+++ LM+AADVDG+GS++Y EF+  ++H  ++ ++E+L+KAF  FD++ SG+I I+EL +AL  E     +  I  ++ DVD+D DGRI+YEEF  MM++G   ++  R +
Sbjct:  379 KLALKVIAENIDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSKLTEAEVKQLMDAADVDGNGSIDYIEFITATMHRHRLESNENLYKAFQHFDKDSSGYITIDELESALK-EYGMGDDATIKEVLSDVDSDNDGRINYEEFCAMMRSGNPQQQQPRLF 541          
The following BLAST results are available for this feature:
BLAST of CX289878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 218
Match NameE-valueIdentityDescription
CDPK2_ORYSJ5.883e-3145.45Calcium-dependent protein kinase isoform 2 OS=Oryz... [more]
CDPK2_MAIZE5.883e-3145.45Calcium-dependent protein kinase 2 OS=Zea mays GN=... [more]
CDPKY_ARATH7.683e-3144.81Calcium-dependent protein kinase 34 OS=Arabidopsis... [more]
CDPKH_ARATH1.003e-3044.16Calcium-dependent protein kinase 17 OS=Arabidopsis... [more]
CDPK2_ARATH2.235e-3044.23Calcium-dependent protein kinase 2 OS=Arabidopsis ... [more]
CDPK1_ARATH2.235e-3042.37Calcium-dependent protein kinase 1 OS=Arabidopsis ... [more]
CDPKT_ARATH3.813e-3042.58Calcium-dependent protein kinase 29 OS=Arabidopsis... [more]
CDPK5_SOLTU3.813e-3043.59Calcium-dependent protein kinase 5 OS=Solanum tube... [more]
CDPKQ_ARATH1.109e-2941.38Calcium-dependent protein kinase 26 OS=Arabidopsis... [more]
CDPK9_ARATH1.449e-2939.63Calcium-dependent protein kinase 9 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionC02018B01SK IF1 Citrus clementina cDNA clone C02018B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289878 ID=CX289878; Name=CX289878; organism=Citrus clementina; type=EST; length=722bp
AACAAGCTTAAAAAAGAGCTCTACAAGTTGTGGCTGAGTTTTTGTCTGTG
GAGGAAGTGGCTGGCTTAAAGGAGGCATTTGAGATGATGGACACTAACAA
GAGAGGCAAGATAAACCTTGAGGAGCTAAGGCTTGGGTTGCTAAAAGGTG
GCCAAAATATTCCTGAGGCAGATCTTCAAATCCTCATGGAAGCTGCCGAT
GTTGATGGTGACGGAAGTTTGAATTATGGAGAGTTTGTCGCAGTTTCTGT
TCACCTTAAAAAGATGGCCAATGATGAACATCTGCATAAAGCTTTTTCAT
TCTTTGATCGAAATCGGAGTGGTTTCATAGAGATTGAAGAGCTGAGAAAT
GCCTTAAATGATGAAGTTGACACCAGTGGTGAAGATGTTATCAATGCCAT
TATGCATGATGTTGATACGGACAAGGATGGTCGCATAAGTTACGAGGAGT
TTGCCGTGATGATGAAGGCAGGTACTGATTGGAGAAAGGCGTCAAGGCAA
TATTCACGGGAAAGATTCAACAGTATAAGCTTGAAGTTAATGAGGGAGGA
GGGTTTACAGTTAGCCAACTGAGGGTAAAAGAACTGAAAGTTATCCGACG
GGCTAGCATATCGAGAAATTCACTTCTAAGAAAAAGTAAAATTGTTTTAT
TTTTGTTAAGTTTACACAAGATTATTGTTATTTTATTTATTCTCTGATTT
ATGTCTTTGCATAGGTAGGATT
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