CX289888
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289888 vs. ExPASy Swiss-Prot
Match: CH602_PROM9 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9312) GN=groL2 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.148e-24 Identity = 59/125 (47.20%), Postives = 78/125 (62.40%), Query Frame = 1 Query: 1 NSARGTFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 375 ++ T AA+EEGIVPGGG L HLS + DK + +E +GA+IV+ +L AP IA NA + + G+NA T +Y +M AG++DPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 396 DAINATKAAVEEGIVPGGGTTLAHLSPILKEWADKNLEGEELIGANIVEASLTAPLMRIAENAGSNGAVIAENVKSKPFNDGFNAATGEYVDMSSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CX289888 vs. ExPASy Swiss-Prot
Match: CH602_GLOVI (60 kDa chaperonin 2 OS=Gloeobacter violaceus GN=groL2 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.148e-24 Identity = 61/125 (48.80%), Postives = 80/125 (64.00%), Query Frame = 1 Query: 1 NSARGTFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 375 ++ T AA+EEGIVPGGG L+HL+ + AIK L D DE+ GAD++ +AL AP IA NA ++ GY+AM ++ +ML AGV DPAKV R ALQNAAS+A MVLTT+ + Sbjct: 397 DALNATKAAVEEGIVPGGGTTLLHLTKKIDAIKAGLAD-DEKTGADLIARALEAPLRQIADNAGVEGSVIAQKVRELDFNIGYDAMKGEFVDMLAAGVADPAKVVRSALQNAASIAAMVLTTEVL 520
BLAST of CX289888 vs. ExPASy Swiss-Prot
Match: CH60_CHLFF (60 kDa chaperonin OS=Chlamydophila felis (strain Fe/C-56) GN=groL PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.418e-24 Identity = 59/125 (47.20%), Postives = 80/125 (64.00%), Query Frame = 1 Query: 1 NSARGTFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 375 ++ T AA+EEGI+PGGG ALV + A L + DE++GA IV KAL AP IA NA A GY+A+ D Y +M++AG++DP KVTRCAL++AASVAG++LTT+A+ Sbjct: 398 DAQHATLAAVEEGILPGGGTALVRCIPTLEAFIPILTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIICQQVLARSSNEGYDALRDAYTDMIEAGILDPTKVTRCALESAASVAGLLLTTEAL 522
BLAST of CX289888 vs. ExPASy Swiss-Prot
Match: CH602_PROMS (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain AS9601) GN=groL2 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.418e-24 Identity = 59/125 (47.20%), Postives = 77/125 (61.60%), Query Frame = 1 Query: 1 NSARGTFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 375 ++ T AA+EEGIVPGGG L HLS + DK + +E +GA+IV+ +L AP IA NA + G+NA T +Y +M AG++DPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 396 DAINATKAAVEEGIVPGGGTTLAHLSPILKEWADKNLEGEELIGANIVEASLTAPLMRIAENAGSNGAVIAENVKTKPFNDGFNAATGEYVDMSSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CX289888 vs. ExPASy Swiss-Prot
Match: CH602_PROM0 (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9301) GN=groL2 PE=3 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.418e-24 Identity = 59/125 (47.20%), Postives = 77/125 (61.60%), Query Frame = 1 Query: 1 NSARGTFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 375 ++ T AA+EEGIVPGGG L HLS + DK + +E +GA+IV+ +L AP IA NA + G+NA T +Y +M AG++DPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 396 DAINATKAAVEEGIVPGGGTTLAHLSPILKEWADKNLEGEELIGANIVEASLTAPLMRIAENAGSNGAVIAENVKTKPFNDGFNAATGEYVDMSSAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CX289888 vs. ExPASy Swiss-Prot
Match: CH602_THEVL (60 kDa chaperonin 2 OS=Thermosynechococcus vulcanus GN=groL2 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.076e-24 Identity = 59/125 (47.20%), Postives = 79/125 (63.20%), Query Frame = 1 Query: 1 NSARGTFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 375 ++ T AA+ EGIVPGGG L+HL+ + A+ L +E+ GA IV AL AP + IA NA A ++ G+NA T YE+++ AG+IDPAKV R ALQNA S+AGMVLTT+A+ Sbjct: 396 DALNATKAAVAEGIVPGGGVTLLHLASRIDALLPSLSP-EEQTGARIVASALAAPVAQIADNAGAEGAVVVENVRAGDFNYGFNAATGAYEDLVSAGIIDPAKVVRSALQNAGSIAGMVLTTEAL 519
BLAST of CX289888 vs. ExPASy Swiss-Prot
Match: CH602_THEEB (60 kDa chaperonin 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=groL2 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.076e-24 Identity = 59/125 (47.20%), Postives = 79/125 (63.20%), Query Frame = 1 Query: 1 NSARGTFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 375 ++ T AA+ EGIVPGGG L+HL+ + A+ L +E+ GA IV AL AP + IA NA A ++ G+NA T YE+++ AG+IDPAKV R ALQNA S+AGMVLTT+A+ Sbjct: 396 DALNATKAAVAEGIVPGGGVTLLHLASRIDALLPSLSP-EEQTGARIVASALAAPVAQIADNAGAEGAVVVENVRAGDFNYGFNAATGAYEDLVSAGIIDPAKVVRSALQNAGSIAGMVLTTEAL 519
BLAST of CX289888 vs. ExPASy Swiss-Prot
Match: CH601_CHLCV (60 kDa chaperonin 1 OS=Chlamydophila caviae GN=groL1 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.241e-24 Identity = 58/125 (46.40%), Postives = 81/125 (64.80%), Query Frame = 1 Query: 1 NSARGTFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 375 ++ T AA+EEGI+PGGG ALV + A L + DE++GA IV KAL AP IA NA + + GY+A+ D Y +M++AG++DP KVTRCAL++AASVAG++LTT+A+ Sbjct: 398 DAQHATLAAVEEGILPGGGTALVRCIPTLEAFIPILTNEDEQIGARIVLKALSAPLKQIAANAGKEGAIICQQVLSRSSSEGYDALRDAYTDMIEAGILDPTKVTRCALESAASVAGLLLTTEAL 522
BLAST of CX289888 vs. ExPASy Swiss-Prot
Match: CH60_LACAC (60 kDa chaperonin OS=Lactobacillus acidophilus GN=groL PE=3 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.207e-23 Identity = 64/126 (50.79%), Postives = 82/126 (65.08%), Query Frame = 1 Query: 1 NSARGTFAAIEEGIVPGGGAALVHLSDHVPAIKD-KLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 375 ++ T AA++EG V GGG ALV D AIKD K E +DE+ G +IV +AL AP IA NA + E GYNA TDK+ENM++AG+IDP KVTR ALQNAAS+A ++LTT+A+ Sbjct: 396 DALNSTRAAVDEGYVAGGGTALV---DVEKAIKDLKGETSDEQTGINIVLRALSAPVRQIAENAGKDGAVVLNKLESQENEIGYNAATDKWENMVEAGIIDPTKVTRTALQNAASIAALLLTTEAV 518
BLAST of CX289888 vs. ExPASy Swiss-Prot
Match: CH60_CHLMU (60 kDa chaperonin OS=Chlamydia muridarum GN=groL PE=2 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 1.207e-23 Identity = 58/125 (46.40%), Postives = 80/125 (64.00%), Query Frame = 1 Query: 1 NSARGTFAAIEEGIVPGGGAALVHLSDHVPAIKDKLEDADERLGADIVQKALVAPASLIAHNAXXXXXXXXXXXXASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 375 ++ T AA+EEGI+PGGG AL+ + A L + DER+GA IV KAL AP IA NA + GY+A+ D Y +M++AG++DPAKVTR AL++AASVAG++LTT+A+ Sbjct: 398 DAQHATIAAVEEGILPGGGTALIRCIPTLEAFLPMLTNEDERIGARIVLKALSAPLKQIAANAGKEGAIIFQQVMSRSANEGYDALRDAYTDMIEAGILDPAKVTRSALESAASVAGLLLTTEAL 522 The following BLAST results are available for this feature:
BLAST of CX289888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289888 ID=CX289888; Name=CX289888; organism=Citrus clementina; type=EST; length=726bpback to top |