CX290054

Overview
NameCX290054
Unique NameCX290054
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length602
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290054 vs. ExPASy Swiss-Prot
Match: WAKLH_ARATH (Wall-associated receptor kinase-like 9 OS=Arabidopsis thaliana GN=WAKL9 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.314e-16
Identity = 50/135 (37.04%), Postives = 78/135 (57.78%), Query Frame = 3
Query:   18 LDSSFNAKLSDFGLS--VTAGTQSRNVKISGTLGYVAPEYLLEGKLTDKSDVYAFGVVLLELLMGRRPVEKMSPTQCQSMVTWAMPQLTDRSKLPNIVDPVIRDTMDLKHLYQVAAVAVLCIQPEPSYRPLITDV 416
            LD  + AK+SDFG S  VT         +SGT+GY+ PEY    + TDKSDVY+FGVVL+EL+ G + +  +   + +++ T+ +  + + +KL +I+D  IRD   L  +   A VA  C+  +   RP + +V
Sbjct:  581 LDEKYRAKVSDFGTSRTVTVDHTHLTTVVSGTVGYMDPEYFQSSQFTDKSDVYSFGVVLVELITGEKSISFLRSQENRTLATYFILAMKE-NKLFDIIDARIRDGCMLSQVTATAKVARKCLNLKGRKRPSMREV 714          
BLAST of CX290054 vs. ExPASy Swiss-Prot
Match: WAKLG_ARATH (Wall-associated receptor kinase-like 8 OS=Arabidopsis thaliana GN=WAKL8 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.314e-16
Identity = 48/139 (34.53%), Postives = 77/139 (55.40%), Query Frame = 3
Query:   18 LDSSFNAKLSDFGLSVTAGTQSRNVK--ISGTLGYVAPEYLLEGKLTDKSDVYAFGVVLLELLMGRRPVEKMSPTQCQSMVTWAMPQLTDRSKLPNIVDPVIRDTMDLKHLYQVAAVAVLCIQPEPSYRPLITDVLHSL 428
            LD    AK+SDFG+S +      ++   + GT+GYV PEYL     T KSDVY+FGV+L+ELL G +PV  +   + + +  + +  + +  +L  I+D  I++  D + +  VA +A  C+     +RP + DV   L
Sbjct:  523 LDEKHRAKVSDFGISRSVAIDDTHLTTIVQGTIGYVDPEYLQSNHFTGKSDVYSFGVLLIELLTGEKPVSLLRRQEVRMLGAYFLEAMRN-DRLHEILDARIKEECDREEVLAVAKLARRCLSLNSEHRPTMRDVFIEL 660          
BLAST of CX290054 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 1.314e-16
Identity = 53/146 (36.30%), Postives = 83/146 (56.85%), Query Frame = 3
Query:   18 LDSSFNAKLSDFGLS---VTAGTQSRNVKISGTLGYVAPEYLLEGKLTDKSDVYAFGVVLLELLMGRRPVEKMSPTQCQSMVTWA------MPQLTDRSKLPNIVDPVIRDTMDLKHLYQVAAVAVLCIQPEPSYRPLITDVLHSL 428
            LDS F A ++DFGL+   V          I+G+ GY+APEY    K+ +KSDVY+FGVVLLEL+ G++PV +    +   +V W       + Q +D + +  IVDP +     L  +  V  +A++C++ E + RP + +V+H L
Sbjct:  825 LDSDFEAHVADFGLAKFLVDGAASECMSSIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIAGKKPVGEFG--EGVDIVRWVRNTEEEITQPSDAAIVVAIVDPRLTG-YPLTSVIHVFKIAMMCVEEEAAARPTMREVVHML 967          
BLAST of CX290054 vs. ExPASy Swiss-Prot
Match: CCR35_ARATH (Serine/threonine-protein kinase-like protein At3g51990 OS=Arabidopsis thaliana GN=At3g51990 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.314e-16
Identity = 47/138 (34.06%), Postives = 83/138 (60.14%), Query Frame = 3
Query:   18 LDSSFNAKLSDFGLSVTAGTQSRNVKIS---GTLGYVAPEYLLEGKLTDKSDVYAFGVVLLELLMGRRPVE-KMSPTQCQSMVTWAMPQLTDRSKLPNIVDPVIRDTMDLKHLYQVAAVAVLCIQPEPSYRPLITDVL 419
            +D + NAKL DFGL++      + VK +   GT+GY+ P+Y+   +L+ K+DV++FG++LLE++ GR+ ++ + SP+    +V WA+P +  R K+  I DP I   +D+     +  VA  C++     RP + +V+
Sbjct:  193 MDKNLNAKLGDFGLAIRCNVDDQKVKSTPPAGTMGYLDPDYVTADRLSTKTDVFSFGILLLEIISGRKAIDVRYSPS---FIVDWAIPMI-KRGKIGGIYDPRIGPPIDVSVRNHLGLVAAKCVRTCREKRPGMEEVV 326          
BLAST of CX290054 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.716e-16
Identity = 50/140 (35.71%), Postives = 85/140 (60.71%), Query Frame = 3
Query:   18 LDSSFNAKLSDFGLSVTAGTQSRNVK--ISGTLGYVAPEYLLEGKLTDKSDVYAFGVVLLELLMGRRPVE-KMSPTQCQSMVTWAMPQLTDRSKLPNIVDPVIRDTMDLKHLYQVAAVAVLCIQPEPSYRPLITDVLHSL 428
            LD  F A + DFGL+     +  +V   + GT+G++APEYL  G+ ++K+DV+ FG++LLEL+ G R +E   S +Q  +M+ W + +L    K+  +VD  +  T D   + ++  VA+LC Q  P++RP +++V+  L
Sbjct:  430 LDEYFEAVVGDFGLAKLLNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSVSQKGAMLEW-VRKLHKEMKVEELVDRELGTTYDRIEVGEMLQVALLCTQFLPAHRPKMSEVVQML 568          
BLAST of CX290054 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.716e-16
Identity = 47/130 (36.15%), Postives = 76/130 (58.46%), Query Frame = 3
Query:   18 LDSSFNAKLSDFGLS--VTAGTQSRNVKISGTLGYVAPEYLLEGKLTDKSDVYAFGVVLLELLMGRRPVEKMSPTQCQSMVTWAMPQLTDRSKLPNIVDPVIRDTMDLKHLYQVAAVAVLCIQPEPSYRP 401
            LD  + AK+SDFG S  VT         ++GT GY+ PEY L  + TDKSDVY+FGVVL+EL+ G +P+ ++   + + + T  +  + + +++ +I+D  I++   L  L  VA +A  C+  +   RP
Sbjct:  565 LDEKYGAKVSDFGTSRSVTIDQTHLTTMVAGTFGYMDPEYFLSSQYTDKSDVYSFGVVLVELITGEKPLSRIRSEEGRGLATHFLEAMKE-NRVIDIIDIRIKEESKLDQLMAVAKLARKCLSRKGIKRP 693          
BLAST of CX290054 vs. ExPASy Swiss-Prot
Match: WAKLD_ARATH (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.716e-16
Identity = 48/135 (35.56%), Postives = 75/135 (55.56%), Query Frame = 3
Query:   18 LDSSFNAKLSDFGLS--VTAGTQSRNVKISGTLGYVAPEYLLEGKLTDKSDVYAFGVVLLELLMGRRPVEKMSPTQCQSMVTWAMPQLTDRSKLPNIVDPVIRDTMDLKHLYQVAAVAVLCIQPEPSYRPLITDV 416
            LD  +  K+SDFG S  VT        +++GT GYV PEY    K TDKSDVY+FGVVL+EL+ G+ P  ++   + +      +  + + ++  +IVD  I+D  +L  +  VA +A  C+  +   RP + +V
Sbjct:  557 LDEKYQVKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEYFQSSKFTDKSDVYSFGVVLVELITGKNPSSRVQSEENRGFAAHFVAAVKE-NRFLDIVDERIKDECNLDQVMAVAKLAKRCLNRKGKKRPNMREV 690          
BLAST of CX290054 vs. ExPASy Swiss-Prot
Match: RKF1_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS=Arabidopsis thaliana GN=RKF1 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.716e-16
Identity = 51/144 (35.42%), Postives = 81/144 (56.25%), Query Frame = 3
Query:   18 LDSSFNAKLSDFGLSVTAGTQSRNV--KISGTLGYVAPEYLLEGKLTDKSDVYAFGVVLLELLMGRRPVEKMSPTQCQSMVTWAMPQLTDRSKLPNIVDPVIRDTMDLKHLYQVAAVAVLCIQPEPSYRPLITDVLHSLIPLVP 443
            LD     K+SDFGL+     +  ++  K++GT+GY+APEY L G LT K+DVY+FGV++LE++ G      M       ++ +A  +  +   L  +VD  +R  +D K    V  VA++C    P+ RPL+++V+  L  L P
Sbjct:  815 LDKDLTPKISDFGLARLDEEEKTHISTKVAGTIGYMAPEYALWGYLTFKADVYSFGVLVLEIVAGITNSNFMGAGDSVCLLEFA-NECVESGHLMQVVDERLRPEVDRKEAEAVIKVALVCSSASPTDRPLMSEVVAMLEGLYP 957          
BLAST of CX290054 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 1.716e-16
Identity = 47/140 (33.57%), Postives = 83/140 (59.29%), Query Frame = 3
Query:   18 LDSSFNAKLSDFGLSVTAG---TQSRNVKISGTLGYVAPEYLLEGKLTDKSDVYAFGVVLLELLMGRR--PVEKMSPTQ-CQSMVTWAMPQLTDRSKLPNIVDPVIRDTMDLKHLYQVAAVAVLCIQPEPSYRPLITDVL 419
            LD+  N K++DFGL+   G   TQ    +I+GT  Y++PEY + G+ + KSD+Y+FGV++LE++ G++   V +M  T    ++VT+A     ++S L  +VDP          + +   +A+LC+Q  P  RP+++ ++
Sbjct:  483 LDADMNPKIADFGLATIFGVEQTQGNTNRIAGTYAYMSPEYAMHGQYSMKSDIYSFGVLVLEIISGKKNSGVYQMDETSTAGNLVTYASRLWRNKSPL-ELVDPTFGRNYQSNEVTRCIHIALLCVQENPEDRPMLSTII 621          
BLAST of CX290054 vs. ExPASy Swiss-Prot
Match: Y4361_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.242e-16
Identity = 53/144 (36.81%), Postives = 85/144 (59.03%), Query Frame = 3
Query:   21 DSSFNAKLSDFGLS-VTAGTQSRNVKIS---GTLGYVAPEYLLEGKLTDKSDVYAFGVVLLELLMGRRPVEKMSPTQCQSMVTWAMPQLTDRSKLPNIVDPVI----RDTMDLKHLYQVAAVAVLCIQPEPSYRPLITDVLHSL 428
            D+ F A +SDFGL  +T  + SR+   +   GTLGYV+PE  L G++T +SD+Y+FG+VLLE+L G+RPV     TQ + +V W   QL  R ++  +++P +     ++ + +       V +LC   +P  RP ++DV+  L
Sbjct:  975 DADFEAHISDFGLDRLTIRSPSRSAVTANTIGTLGYVSPEATLSGEITRESDIYSFGIVLLEILTGKRPV---MFTQDEDIVKWVKKQL-QRGQVTELLEPGLLELDPESSEWEEFLLGIKVGLLCTATDPLDRPTMSDVVFML 1114          
The following BLAST results are available for this feature:
BLAST of CX290054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 208
Match NameE-valueIdentityDescription
WAKLH_ARATH1.314e-1637.04Wall-associated receptor kinase-like 9 OS=Arabidop... [more]
WAKLG_ARATH1.314e-1634.53Wall-associated receptor kinase-like 8 OS=Arabidop... [more]
CLV1_ARATH1.314e-1636.30Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
CCR35_ARATH1.314e-1634.06Serine/threonine-protein kinase-like protein At3g5... [more]
Y2239_ARATH1.716e-1635.71Probable LRR receptor-like serine/threonine-protei... [more]
WAKLE_ARATH1.716e-1636.15Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
WAKLD_ARATH1.716e-1635.56Wall-associated receptor kinase-like 4 OS=Arabidop... [more]
RKF1_ARATH1.716e-1635.42Probable LRR receptor-like serine/threonine-protei... [more]
CRK11_ARATH1.716e-1633.57Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
Y4361_ARATH2.242e-1636.81Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC02020A05SK IF1 Citrus clementina cDNA clone C02020A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290054 ID=CX290054; Name=CX290054; organism=Citrus clementina; type=EST; length=602bp
GGAATTCGGCACGAGGGCTGGATTCCAGTTTTAATGCAAAGCTTTCAGAT
TTTGGCCTTTCTGTGACTGCTGGAACCCAGAGTAGGAATGTTAAGATCTC
TGGAACTCTGGGTTATGTTGCCCCGGAGTACCTATTAGAAGGAAAACTAA
CTGATAAAAGTGATGTATATGCTTTCGGAGTTGTATTGCTGGAACTTTTG
ATGGGGAGAAGGCCTGTGGAAAAGATGTCACCAACTCAATGTCAATCAAT
GGTCACATGGGCCATGCCTCAGCTCACCGATAGATCAAAGCTTCCAAACA
TTGTGGATCCAGTAATTAGAGACACAATGGATTTAAAGCACTTATACCAG
GTAGCCGCTGTGGCAGTGCTATGTATACAACCTGAACCAAGTTATAGGCC
ATTGATAACCGACGTTCTGCATTCCCTCATTCCTCTTGTACCTACCGACC
TTGGAGGGTCACTCCGAGTGACCTAACCACAAATGCTTGGTTTGTAAATT
TGCCCAGCATGTCAGCTAGCATCAAATGTCTGGCTTATTACTGGTTTCCT
CAAGTGCCTGATCATTCTTTTAGGACAACAGTTTCCTTCAGGGAATTTAG
AT
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