CX290056
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 4.883e-28 Identity = 68/165 (41.21%), Postives = 104/165 (63.03%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLCIKCGQ 511 K+IEN T+RQVTF KRRNG+LKKAYELSVLCDAEVA+I+FS +GRLYE+S++ ++ T+ERY + + + E Q + E A + ++I I+ S R+L+G+ +GS + RS+ IR++K +L ++ ++++E L DN L K + Sbjct: 25 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNSVKGTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAKIAE 189
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: AGL9_SOLLC (Agamous-like MADS-box protein AGL9 homolog OS=Solanum lycopersicum GN=TDR5 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.883e-28 Identity = 78/164 (47.56%), Postives = 98/164 (59.76%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEF-SSSEMQKTLERY----YRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARL 493 K+IE +RQVTF+KRRNG+LKKAYELSVLCDAEVA+IIFS +G+LYEF SSS M KTLERY Y E R +E QQ E + + E ++ SQR LLG+DLG + SL+ IR+ + QL +Q+ + KE L E N L Sbjct: 9 KRIEGKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPEPNISTREALEISSQQ---EYLKLKGRYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQIRSTRTQLMLDQLTDYQRKEHALNEANRTL 169
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: GGM13_GNEGN (MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.421e-27 Identity = 69/162 (42.59%), Postives = 102/162 (62.96%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFS--SSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLC 496 K+IEN T+RQVTFSKRR G+LKKA+ELSVLCDAE+ +IIFS G+L+E+S SS M+K +ERY + + R + + Q L E+ M + E ++ + R+++G+DL S T + +R+RK QL +Q+ L+ KER+L + N+ LC Sbjct: 9 KRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSASSSMKKIIERYQKVSGARITEYDN-----QHLYCEMTRMKNENEKLQTNIRRMMGEDLTSLTMTELHHLGQQLESASSRVRSRKNQLMLQQLENLRRKERILEDQNSHLC 165
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 1.421e-27 Identity = 76/184 (41.30%), Postives = 110/184 (59.78%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSS-SEMQKTLERYYRYT-EERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARL---------CIKCGQKPWQQSTQ 535 K+IEN +RQVTFSKRR G+LKKA+E+SVLCDAEVA+++FS KG+L+E+S+ S M+K LERY RY+ ERQ+ + E + KIE +E +QR LG+DL + + +L+ IR RK QL E + +L++KE+ + E N+ L ++ Q+ W Q Q Sbjct: 9 KRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESD-VNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRTRKNQLMYESINELQKKEKAIQEQNSMLSKQIKEREKILRAQQEQWDQQNQ 191
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.856e-27 Identity = 73/187 (39.04%), Postives = 118/187 (63.10%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSS-SEMQKTLERY--YRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLCIKCGQKPWQQSTQRKEAVNNCSQS 568 K+IEN +RQVTFSKRR+G+LKKA+E+SVLCDAEVA+I+FS KG+L+E+S+ S M++ LERY Y Y++++ + R+ + L+H A + ++E +E ++R +G+DL S + +++SIR+RK Q E + L++K++ L + N L K ++ + Q + V CS S Sbjct: 9 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSSKGKLFEYSTDSCMERILERYDRYLYSDKQLVGRDVSQSENWVLEH--AKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLKKIKEREKKTGQQEGQLV-QCSNS 192
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.424e-27 Identity = 74/181 (40.88%), Postives = 111/181 (61.33%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSS-SEMQKTLERYYRYT-EERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARL---------CIKCGQKPWQQ 526 K+IEN +RQVTFSKRR G+LKKA+E+SVLCDAEVA+++FS KG+L+E+S+ S M+K LERY RY+ ERQ+ + E + KIE +E +QR LG+DL + ++ +L+ IR+RK QL ++ + +L+ KE+ + E N+ L ++ Q+ W Q Sbjct: 9 KRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESD-VNTNWSMEYNRLKAKIELLERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRKNQLMHDSINELQRKEKAIQEQNSMLSKQIKEREKILRAQQEQWDQ 188
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: AGL9_ARADE (Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.424e-27 Identity = 73/177 (41.24%), Postives = 107/177 (60.45%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEF-SSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLCIKCGQKPWQQSTQRKE 544 K IEN +RQVTF+KRR +LKKAYELSVLCDAEVA+IIFS +G+LYEF SS+ M KTLE+Y + + + R Q + E + ++E ++ SQR LLG+DLG + SLR IR+ + Q +Q+ L+ +E++L E N L ++ +++S+Q + Sbjct: 9 KMIENKINRQVTFAKRRKRLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSTSMLKTLEKYQK-CNFGSPESTIISRETQSSQQEYLKLKNRVEALQRSQRNLLGEDLGPLGSKELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEANKTL-----KRRFEESSQANQ 179
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.165e-27 Identity = 74/188 (39.36%), Postives = 118/188 (62.77%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSS-SEMQKTLERY--YRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLCIKCGQK---PWQQSTQRKEAVNNCS 562 K+IEN +RQVTFSKRR+G+LKKA+E+SVLCDAEVA++IFS KG+L+E+S+ S M+K LERY Y Y++++ + R+ + L+H A + ++E +E ++R +G+DL S + +++SIR+RK Q E + L++K+++L + N L K ++ Q Q + NN S Sbjct: 9 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKILERYDRYLYSDKQLVGRDISQSENWVLEH--AKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHNNALLKKIKEREKNTVHQEVQLIQCSNNSS 194
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 4.134e-27 Identity = 70/159 (44.03%), Postives = 103/159 (64.78%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARL 493 K+IEN +RQVTFSKR++G+LKKAYELSVLCDAEV++IIFS G+LYEFS+ + +T+ERYYR ++ +D + +E Q L+ E+ + K E + + R L+G+DL + +L + R +K Q+ EQM +L+ KER L + N +L Sbjct: 9 KRIENKITRQVTFSKRKSGLLKKAYELSVLCDAEVSLIIFSTGGKLYEFSNVGVGRTIERYYR-CKDNLLDNDTLED-TQGLRQEVTKLKCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKL 165
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: MAD58_ORYSJ (MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica GN=MADS58 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 7.051e-27 Identity = 64/165 (38.79%), Postives = 101/165 (61.21%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLCIKCGQ 511 K+IEN T+RQVTF KRR+G+LKKAYELSVLCDAEVA+++FS +GRLYE+S++ +++T+ERY + + E Q + E A + ++I +++ S R L+G ++ + + + L IRARK +L ++ ++ +E L DN L K + Sbjct: 51 KRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSVKETIERYKKANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTMNHRELKQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSKVAE 215 The following BLAST results are available for this feature:
BLAST of CX290056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290056 ID=CX290056; Name=CX290056; organism=Citrus clementina; type=EST; length=741bpback to top |