CX290056
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.203e-26 Identity = 71/185 (38.38%), Postives = 118/185 (63.78%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSS-SEMQKTLERYYRYT--EERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLCIKCGQKPWQQSTQRKEAVNNCS 562 K+IEN +RQVTFSKRR+G+LKKA+E+SVLCDAEV +I+FS KG+L+E+++ S M++ LERY RY+ E++ + + L+H + ++E ++ +Q+ +G+DL S + +L+ IR+RK QL +E + L++K+R L E N +L K ++ ++S Q+ +N+ S Sbjct: 9 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERILERYERYSFAEKQLVPTDHTSPVSWTLEHR--KLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNNQLSKKVKER--EKSAQQISGINSSS 189
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: AG_PANGI (Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.680e-26 Identity = 64/165 (38.79%), Postives = 102/165 (61.82%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLCIKCGQ 511 K+IEN T+RQVTF KRRNG+LKKAYELSVLCDAEVA+I+FS +GRLYE++++ ++ T+ERY + + + E Q + E + + ++I I+ + R ++G+ LGS T + + IR++K +L ++ +++KE L +N L K + Sbjct: 25 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSTRGRLYEYANNSVKGTIERYKKACTDSPNTSSVSEANAQFYQQEASKLRQEISSIQKNNRNMMGESLGSLTVRDLKGLETKLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLRAKIAE 189
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 3.500e-26 Identity = 70/193 (36.27%), Postives = 117/193 (60.62%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEE--RQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLCIKCGQKPWQQSTQRKEAVNNCSQSGQSSDIE 589 K+I+N +RQVTFSKRR G++KKA EL++LCDA+V +I+FS GRLY+FSSS M+ +ERY EE R ++ ++ Q+ E+ + ++++++ + R+LLG+++ + T SL SIR +K QL E++ +L EK L+ ++N+ L +K + + QR ++ SG+S+ E Sbjct: 9 KRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSSSMKSIIERYQEAGEEHCRLLNPMSEAKFWQR---EVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEILKLNEKGSLVQKENSEL-----RKKFNIAHQRNIELHKKLNSGESTSSE 193
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSJ (MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica GN=MADS5 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.571e-26 Identity = 75/166 (45.18%), Postives = 99/166 (59.64%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSE-MQKTLERY------YRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARL 493 K+IEN SRQVTF+KRRNG+LKKAYELSVLCDAEVA+IIFS +GRL+EFS+S M KTLERY E + Y + LK + ++E ++ +QR LLG+DL + SL +IR+ K Q +Q+ +LK KE+ L + N L Sbjct: 9 KRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLK-----LKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDL 169
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSI (MADS-box transcription factor 5 OS=Oryza sativa subsp. indica GN=MADS5 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.571e-26 Identity = 75/166 (45.18%), Postives = 99/166 (59.64%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSE-MQKTLERY------YRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARL 493 K+IEN SRQVTF+KRRNG+LKKAYELSVLCDAEVA+IIFS +GRL+EFS+S M KTLERY E + Y + LK + ++E ++ +QR LLG+DL + SL +IR+ K Q +Q+ +LK KE+ L + N L Sbjct: 9 KRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNSCEASAALETELSNYQEYLK-----LKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDL 169
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: AGL1_ARATH (Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1 PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.571e-26 Identity = 68/196 (34.69%), Postives = 113/196 (57.65%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLCIKCGQKPWQQSTQRKEAV---NNCSQSGQSSDIETE 595 K+IEN T+RQVTF KRRNG+LKKAYELSVLCDAEVA++IFS +GRLYE++++ ++ T+ERY + + + E Q + E + + +I I+ S R ++G+ LGS + + +R++K +L ++ ++++E L +N L K + Q++ +V +SG SS +++ Sbjct: 24 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPPSVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAEGARLNPDQQESSVIQGTTVYESGVSSHDQSQ 219
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: AG_TOBAC (Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.969e-26 Identity = 63/179 (35.20%), Postives = 107/179 (59.78%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLCIKCGQKPWQQSTQRKEAVN 553 K+IEN T+RQVTF KRRNG+LKKAYELSVLCDAEVA+I+FS +GRLYE++++ ++ T+ERY + + + E Q + E + + +I +++ R +LG+ L + + + + IR++K +L ++ ++++E L +N L K + Q Q+++ +N Sbjct: 25 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIERYKKACSDSSNTGSISEANAQYYQQEASKLRAQIGNLQNQNRNMLGESLAALSLRDLKNLEQKIEKGISKIRSKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETERAQQQQQQQQMN 203
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: AGL5_ARATH (Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.796e-26 Identity = 69/195 (35.38%), Postives = 108/195 (55.38%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLCIKCGQKPW---------QQSTQRKEAVNNCSQSGQ 574 K+IEN T+RQVTF KRRNG+LKKAYELSVLCDAEVA++IFS +GRLYE++++ ++ T+ERY + + E Q + E + + +I I+ R +LG+ LGS + + +R++K ++ ++ ++++E L DN L K ++ Q T + V + QSGQ Sbjct: 24 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANNSVRGTIERYKKACSDAVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSLNFKELKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKITERTGLQQQESSVIHQGTVYESGVTSSHQSGQ 218
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: AGL8_SOLTU (Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.018e-25 Identity = 74/203 (36.45%), Postives = 120/203 (59.11%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSS-SEMQKTLERYYRYT--EERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLCIKCGQKPWQQSTQRKEAVNNCSQSGQSSDIETELFIGLPE 616 K+IEN +RQVTFSKRR+G+LKKA+E+SVLCDAEV +I+FS KG+L+E+++ S M++ LERY RY+ E + + + L+H A + ++E ++ +Q+ +G+DL S +L+ IR+RK QL +E + L++++R L E N +L K ++ KE Q+ +I + F+ LP+ Sbjct: 9 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERLLERYERYSFAERQLVPTDHTSPGSWTLEH--AKLKARLEVLQRNQKHYVGEDLESLNMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKER-------EKEVAQQNQWDQQNHEINSSTFV-LPQ 201
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2) HSP 1 Score: 116.316 bits (290), Expect = 1.737e-25 Identity = 70/192 (36.46%), Postives = 107/192 (55.73%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLCIKCGQKPWQQSTQRKEAVNNCSQSGQSSDIET 592 ++I+N TSRQVTFSKRRNG+LKKA ELS+LCDAEV +++FS GRLYEFSS+ M+ ++RY EE E + Q E A++ +++ +++ S ++L+G++L SLR+IR RK L ++ +L K L+ ++N L QQ + + C Q G + E+ Sbjct: 9 RRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSSTNMKTVIDRYTNAKEELLGGNATSEIKIWQ--REAASLRQQLHNLQESHKQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSRSLNVMS-QQKLELYNKLQACEQRGATDANES 197 The following BLAST results are available for this feature:
BLAST of CX290056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290056 ID=CX290056; Name=CX290056; organism=Citrus clementina; type=EST; length=741bpback to top |