CX290056
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: AG_SOLLC (Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.773e-23 Identity = 58/165 (35.15%), Postives = 97/165 (58.79%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLCIKCGQ 511 K+IEN T+RQVTF KRRNG+LKKAYELSVLCDAEVA+++FS +GRLYE++++ ++ T+ERY + + + E Q + E + + +I ++ R ++G+ L + + IR++K +L ++ ++++E L +N L K + Sbjct: 25 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSNRGRLYEYANNSVKATIERYKKACSDSSNTGSVSEANAQYYQQEASKLRAQIGNLMNQNRNMMGEALAGMKLKELKNLEQRIEKGISKIRSKKNELLFAEIEYMQKREVDLHNNNQYLRAKIAE 189
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.730e-23 Identity = 64/158 (40.51%), Postives = 92/158 (58.23%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS--EMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDN 484 K+IEN TSRQVTFSKRR G+LKK +ELSVLCDA++ +IIFS KG+L+E+ S M + + RY + T +E QL E+A M ++++S ++ G DL +L IRARK +L +QM LK+ E++L ++N Sbjct: 12 KRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTTGASL----PVEDNRVQLYDEVAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHALNKIRARKLELMQQQMENLKKTEKMLEKEN 165
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.797e-22 Identity = 58/148 (39.19%), Postives = 88/148 (59.46%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEK 460 K+I+N TSRQVTFSKRR+G+ KKA ELS+LCDAEV +++FS RLY+F+SS M+ +ERY E+ N + + E A++ +++ +++ R+LLGQ L SL++IR RK + +Q+ +L K Sbjct: 9 KRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASSSMKSIIERYNETKEDPHQTMNASSE-AKLWQQEAASLRQQLHNLQEYHRQLLGQQLSGLDVEDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRK 155
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: DEF21_ANTMA (MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.347e-22 Identity = 60/163 (36.81%), Postives = 98/163 (60.12%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSS--EMQKTLERYYRYTE--ERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARL 493 K+IEN+TSRQVTFSKRR+G++KK +ELSVLCDA++ +I+FS KG+L E+ + M++ ++RY + +R G Q+ E+ M E+ +++++ ++ G DL + +SL +RARK +L +EQM LK E +L ++N + Sbjct: 9 KRIENNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTPPFSMKQIIDRYVKAKGILPEMENRAGPHADNDQVIKELTRMKEETLNLQLNLQRYKGDDLSTVRFEELTELEKLLDQSLNKVRARKLELLHEQMENLKRTEFMLEKENQEM 171
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: AGL15_BRANA (Agamous-like MADS-box protein AGL15 OS=Brassica napus GN=AGL15 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.347e-22 Identity = 64/159 (40.25%), Postives = 92/159 (57.86%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARL 493 K+IEN SRQVTFSKRR G+LKKA+ELSVLCDAEVAVI+FS+ G+L+EFSS+ M+KTL RY Y + + Q+ E+ + ++I ++ + G+ L + SL S+R RK L +Q+ + + KE+ +N L Sbjct: 9 KRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEFSSTSMKKTLLRYGNYQISSDVPGINCKTENQEECTEVDLLKDEISMLQEKHLHMQGKPLNLLSLKELQHLEKQLNFSLISVRERKELLLTKQLEESRLKEQRAELENETL 167
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: MAD20_ORYSJ (MADS-box transcription factor 20 OS=Oryza sativa subsp. japonica GN=MADS20 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 6.830e-22 Identity = 62/153 (40.52%), Postives = 96/153 (62.75%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSE--MQKTLERYYRYTEERQIDRNGMERYMQ---QLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEK 460 ++IEN+ SRQVTFSKRR G+LKKA+E++VLCD +VA I+FS KG L+ ++SS M++ LE+Y R+ E N +E + + + ++ + +IE ++ SQR L+GQ+L S T SL +IR+RK +L E+ L++K Sbjct: 9 RRIENEVSRQVTFSKRRPGLLKKAHEIAVLCDVDVAAIVFSAKGNLFHYASSHTTMERILEKYDRH-ELLSEGNNVIEEFPELEGSMSYDHIKLRGRIEALKKSQRNLMGQELDSLTLQDIQQLENQIDTSLNNIRSRKEKLLMEKNTILEKK 160
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: TT16_ARATH (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.165e-21 Identity = 61/158 (38.61%), Postives = 88/158 (55.70%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSE--MQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDN 484 KKIEN T+RQVTFSKRR G++KK ELS+LCDA + +I+FS G+L EF S + M + ++RY R D + + +QL HE+ + + ++E+ R G DL S S+ +R RK +L +Q+ L K R+L EDN Sbjct: 9 KKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSEQNRMPQLIDRYLHTNGLRLPDHHDDQ---EQLHHEMELLRRETCNLELRLRPFHGHDLASIPPNELDGLERQLEHSVLKVRERKNELMQQQLENLSRKRRMLEEDN 163
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: FBP1_PETHY (Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.595e-21 Identity = 60/194 (30.93%), Postives = 107/194 (55.15%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLCIKCGQKPWQQSTQRKEAVNNCSQSGQSSDIETEL 598 K+IEN ++RQVT+SKRRNG+LKKA E+SVLCDA V+VIIF+ G+++EFSS+ + L++Y++ T R +D + L +EI + + +++++ R L G+D+ S + L SIR ++ NE + +++K + + E+ +L + Q + + Q ++ D + + Sbjct: 9 KRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSSTSLVDILDQYHKLTGRRLLDAK-----HENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMILEDALENGLTSIRNKQ----NEVLRMMRKKTQSMEEEQDQLNCQLRQLEIATMNRNMGEIGEVFQQRENHDYQNHM 193
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: AGL17_ARATH (Agamous-like MADS-box protein AGL17 OS=Arabidopsis thaliana GN=AGL17 PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.390e-21 Identity = 60/185 (32.43%), Postives = 101/185 (54.59%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLCIKCGQKPWQQSTQRKEAVNNCSQSG 571 +KI++ TSRQVTFSKRR G++KKA EL++LCDAEV +IIFS +LY+F+SS ++ T+ER+ E Q N ++ + E + +++ ++ + R+L G +L + SLR IR ++ Q+ ++ +L K L+ +N L K + + K+A + +G Sbjct: 9 QKIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVCLIIFSNTDKLYDFASSSVKSTIERFNTAKMEEQELMNPASE-VKFWQREAETLRQELHSLQENYRQLTGVELNGLSVKELQNIESQLEMSLRGIRMKREQILTNEIKELTRKRNLVHHENLELSRKVQRIHQENVELYKKAYGTSNTNG 192
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: MAD30_ORYSJ (MADS-box transcription factor 30 OS=Oryza sativa subsp. japonica GN=MADS30 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 5.782e-21 Identity = 62/162 (38.27%), Postives = 92/162 (56.79%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRY-TEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGS-RTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKERLLLEDNARLC 496 K+IE+ T RQVTFSKRR G LKKA EL+VLCDA+V V++FS KG+L++F S + +E ++RY R R +Q+ EI + +I+ +E S R+ G+DL S T SL + ARK +L ++Q+ ++ + + E N LC Sbjct: 9 KRIEDATRRQVTFSKRRAGFLKKANELAVLCDAQVGVVVFSDKGKLFDFCSPPV-ILMELFHRYEITTRNTRLQETNRDDEQMVMEITRLRNEIDQLEASLRRQTGEDLSSVSTVDELSQLQLQLESSLSKVHARKDELMSQQLEDMRRMHQTVHEQNNFLC 169 The following BLAST results are available for this feature:
BLAST of CX290056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290056 ID=CX290056; Name=CX290056; organism=Citrus clementina; type=EST; length=741bpback to top |