CX290056
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.379e-14 Identity = 49/151 (32.45%), Postives = 82/151 (54.30%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEF-SSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTNXXXXXXXXXXXRSLRSIRARKAQLFNEQMGQLKEKER 466 K+IEN T+RQVT+SKRRNG+ KKA+EL+VLCDA V++I+FS +L+E+ S + K + Y+ + + ER MQ+ K + ++E ++ ++ LG+ L + + +R RK + Q+ K+K + Sbjct: 9 KRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTTTKEIVDLYQTISDVDVWATQYER-MQETKRK---LLETNRNLRTQIKQRLGECLDELDIQELRRLEDEMENTFKLVRERKFKSLGNQIETTKKKNK 155
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: MEF2A_PONAB (Myocyte-specific enhancer factor 2A OS=Pongo abelii GN=MEF2A PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.801e-14 Identity = 41/112 (36.61%), Postives = 70/112 (62.50%), Query Frame = 2 Query: 20 KIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTN 355 +I ++ +RQVTF+KR+ G++KKAYELSVLCD E+A+IIF+ +L++++S++M K L +Y Y E + N ++ L+ + N E + + + L +D S+ N Sbjct: 10 RIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNEPHESRTN--SDIVETLRKKGLNGCESPDADDYFEHSPLSEDRFSKLN 119
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: MEF2A_MOUSE (Myocyte-specific enhancer factor 2A OS=Mus musculus GN=Mef2a PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.801e-14 Identity = 41/112 (36.61%), Postives = 70/112 (62.50%), Query Frame = 2 Query: 20 KIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTN 355 +I ++ +RQVTF+KR+ G++KKAYELSVLCD E+A+IIF+ +L++++S++M K L +Y Y E + N ++ L+ + N E + + + L +D S+ N Sbjct: 10 RIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNEPHESRTN--SDIVETLRKKGLNGCESPDADDYFEHSPLSEDRFSKLN 119
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: MEF2A_CHICK (Myocyte-specific enhancer factor 2A OS=Gallus gallus GN=MEF2A PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.801e-14 Identity = 41/112 (36.61%), Postives = 70/112 (62.50%), Query Frame = 2 Query: 20 KIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEHIEVSQRKLLGQDLGSRTN 355 +I ++ +RQVTF+KR+ G++KKAYELSVLCD E+A+IIF+ +L++++S++M K L +Y Y E + N ++ L+ + N E + + + L +D S+ N Sbjct: 10 RIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNEPHESRTN--SDIVETLRKKGLNGCESPDADDYFEHSPLSEDRFSKLN 119
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: MEF2_DROME (Myocyte-specific enhancer factor 2 OS=Drosophila melanogaster GN=Mef2 PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.353e-14 Identity = 34/68 (50.00%), Postives = 53/68 (77.94%), Query Frame = 2 Query: 20 KIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQ 223 +I ++ +RQVTF+KR+ G++KKAYELSVLCD E+A+IIFS +LY+++S++M + L +Y Y E + Sbjct: 10 RITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVLLKYTEYNEPHE 77
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: MEF2D_XENLA (Myocyte-specific enhancer factor 2D homolog OS=Xenopus laevis GN=mef2d PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.073e-14 Identity = 34/73 (46.58%), Postives = 55/73 (75.34%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRN 235 ++I ++ +RQVTF+KR+ G++KKAYELSVLCD E+A+IIF+ +L++++S++M K L +Y Y E + N Sbjct: 9 QRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTN 81
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: MEF2D_RAT (Myocyte-specific enhancer factor 2D OS=Rattus norvegicus GN=Mef2d PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.073e-14 Identity = 34/73 (46.58%), Postives = 55/73 (75.34%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRN 235 ++I ++ +RQVTF+KR+ G++KKAYELSVLCD E+A+IIF+ +L++++S++M K L +Y Y E + N Sbjct: 9 QRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTN 81
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: MEF2D_MOUSE (Myocyte-specific enhancer factor 2D OS=Mus musculus GN=Mef2d PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.073e-14 Identity = 34/73 (46.58%), Postives = 55/73 (75.34%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRN 235 ++I ++ +RQVTF+KR+ G++KKAYELSVLCD E+A+IIF+ +L++++S++M K L +Y Y E + N Sbjct: 9 QRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTN 81
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: MEF2D_HUMAN (Myocyte-specific enhancer factor 2D OS=Homo sapiens GN=MEF2D PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.073e-14 Identity = 34/73 (46.58%), Postives = 55/73 (75.34%), Query Frame = 2 Query: 17 KKIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRN 235 ++I ++ +RQVTF+KR+ G++KKAYELSVLCD E+A+IIF+ +L++++S++M K L +Y Y E + N Sbjct: 9 QRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNHSNKLFQYASTDMDKVLLKYTEYNEPHESRTN 81
BLAST of CX290056 vs. ExPASy Swiss-Prot
Match: MEF2A_PIG (Myocyte-specific enhancer factor 2A OS=Sus scrofa GN=MEF2A PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 3.073e-14 Identity = 38/94 (40.43%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 20 KIENDTSRQVTFSKRRNGMLKKAYELSVLCDAEVAVIIFSQKGRLYEFSSSEMQKTLERYYRYTEERQIDRNGMERYMQQLKHEIANMIEKIEH 301 +I ++ +RQVTF+KR+ G++KKAYELSVLCD E+A+IIF+ +L++++S++M K L +Y Y E + N +I + K EH Sbjct: 10 RIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSSNKLFQYASTDMDKVLLKYTEYNEPHESGTNS----------DIVEALNKKEH 93 The following BLAST results are available for this feature:
BLAST of CX290056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 118
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290056 ID=CX290056; Name=CX290056; organism=Citrus clementina; type=EST; length=741bpback to top |