CX290065

Overview
NameCX290065
Unique NameCX290065
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length722
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9499 contig Ccv1_Contig9499:432..1153. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290065 vs. ExPASy Swiss-Prot
Match: PPIA_FELCA (Peptidyl-prolyl cis-trans isomerase A OS=Felis catus GN=PPIA PE=2 SV=3)

HSP 1 Score: 172.17 bits (435), Expect = 2.546e-42
Identity = 83/133 (62.41%), Postives = 96/133 (72.18%), Query Frame = 1
Query:    7 IAGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLE 405
            + G+P GR+   LF D VPKTAENFRAL T GEKG+GYKG  FHRII  FM Q             SIYG  F+DE+F+LKH GPG+LSMANAGPNTNGSQFFICT KT WLD +HVVFG V +GM++V  +E
Sbjct:   12 VDGEPLGRVSFDLFADKVPKTAENFRALST-GEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGMVKEGMNIVEAME 143          
BLAST of CX290065 vs. ExPASy Swiss-Prot
Match: PPIA_BOVIN (Peptidyl-prolyl cis-trans isomerase A OS=Bos taurus GN=PPIA PE=1 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 2.546e-42
Identity = 83/133 (62.41%), Postives = 96/133 (72.18%), Query Frame = 1
Query:    7 IAGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLE 405
            + G+P GR+   LF D VPKTAENFRAL T GEKG+GYKG  FHRII  FM Q             SIYG  F+DE+F+LKH GPG+LSMANAGPNTNGSQFFICT KT WLD +HVVFG V +GM++V  +E
Sbjct:   12 VDGEPLGRVSFELFADKVPKTAENFRALST-GEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFDDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAME 143          
BLAST of CX290065 vs. ExPASy Swiss-Prot
Match: PPIE_SCHJA (Peptidyl-prolyl cis-trans isomerase E (Fragment) OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.325e-42
Identity = 88/155 (56.77%), Postives = 105/155 (67.74%), Query Frame = 1
Query:    7 IAGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGEL 471
            I     GRIVM L  D+VP+TAENFRALCT G++G+GY  C FHR+I  FM Q             SIYG  F+DE+F L+H G GVLSMAN+GPNTNGSQFFICT K  WLD +HVVFG V+DG +VV+K+ESV  S++   K P  I   GEL
Sbjct:   26 IGNADRGRIVMELRSDIVPRTAENFRALCT-GDRGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESV-GSKSGKVKEPVTISRCGEL 178          
BLAST of CX290065 vs. ExPASy Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.343e-42
Identity = 91/162 (56.17%), Postives = 108/162 (66.67%), Query Frame = 1
Query:    7 IAGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYG-------YKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGEL 471
            IAG PAGRIVM L+ D  P+TAENFRALCT GEKG G       YKG +FHR+I +FM Q             SIYG+ F DE+F+ +H GPG+LSMANAG  TNGSQFFICT KT WLD +HVVFG VI+GM+VVR +E V  S +     P  I + G+L
Sbjct:   12 IAGNPAGRIVMELYADTTPRTAENFRALCT-GEKGVGRSGKPLHYKGSTFHRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIKRHTGPGILSMANAGAGTNGSQFFICTEKTEWLDGKHVVFGKVIEGMNVVRDIEKV-GSGSGKTSRPVTIADCGQL 171          
BLAST of CX290065 vs. ExPASy Swiss-Prot
Match: PPIE_MOUSE (Peptidyl-prolyl cis-trans isomerase E OS=Mus musculus GN=Ppie PE=2 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 5.672e-42
Identity = 88/154 (57.14%), Postives = 106/154 (68.83%), Query Frame = 1
Query:    7 IAGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGE 468
            I  KPAGRI M L  DVVP TAENFR LCT  EKG+G+KG SFHRII  FM Q             SIYG  F+DE+F+LKH GPG+LSMAN+GPNTNGSQFF+   KT WLD +HVVFG V +G+DV+R++E+ + S+   PK    I + GE
Sbjct:  148 IGNKPAGRIQMLLRSDVVPMTAENFRCLCTH-EKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEA-QGSKDGKPKQKVMIADCGE 299          
BLAST of CX290065 vs. ExPASy Swiss-Prot
Match: PPIE_BOVIN (Peptidyl-prolyl cis-trans isomerase E OS=Bos taurus GN=PPIE PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.672e-42
Identity = 88/154 (57.14%), Postives = 106/154 (68.83%), Query Frame = 1
Query:    7 IAGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYGYKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGE 468
            I  KPAGRI M L  DVVP TAENFR LCT  EKG+G+KG SFHRII  FM Q             SIYG  F+DE+F+LKH GPG+LSMAN+GPNTNGSQFF+   KT WLD +HVVFG + DG+DV+R++E+ + S+   PK    I + GE
Sbjct:  148 IGNKPAGRIQMLLRSDVVPMTAENFRCLCTH-EKGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEITDGLDVLRQIEA-QGSKDGKPKQKVIISDCGE 299          
BLAST of CX290065 vs. ExPASy Swiss-Prot
Match: PPID_RAT (40 kDa peptidyl-prolyl cis-trans isomerase OS=Rattus norvegicus GN=Ppid PE=1 SV=3)

HSP 1 Score: 171.014 bits (432), Expect = 5.672e-42
Identity = 96/164 (58.54%), Postives = 107/164 (65.24%), Query Frame = 1
Query:    4 DIAGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYG--------YKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGEL 471
            DI G+  GRIV+ LF D+VPKTAENFRALCT GEKG G        +KGC FHRIIK FMIQ             SIYG  FEDE+F  KH   G+LSMANAGPNTNGSQFFI TV TP LD +HVVFG VI G+ V R LE+VE +  + P   C I   GEL
Sbjct:   23 DIGGERVGRIVLELFADIVPKTAENFRALCT-GEKGTGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGLGVARMLENVEVN-GEKPAKLCVIAECGEL 184          
BLAST of CX290065 vs. ExPASy Swiss-Prot
Match: PPID_MOUSE (40 kDa peptidyl-prolyl cis-trans isomerase OS=Mus musculus GN=Ppid PE=1 SV=3)

HSP 1 Score: 171.014 bits (432), Expect = 5.672e-42
Identity = 96/164 (58.54%), Postives = 107/164 (65.24%), Query Frame = 1
Query:    4 DIAGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYG--------YKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGEL 471
            DI G+  GRIV+ LF D+VPKTAENFRALCT GEKG G        +KGC FHRIIK FMIQ             SIYG  FEDE+F  KH   G+LSMANAGPNTNGSQFFI TV TP LD +HVVFG VI G+ V R LE+VE +  + P   C I   GEL
Sbjct:   23 DIGGERVGRIVLELFADIVPKTAENFRALCT-GEKGTGSTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGLGVARTLENVEVN-GEKPAKLCVIAECGEL 184          
BLAST of CX290065 vs. ExPASy Swiss-Prot
Match: PPID_GIBZE (Peptidyl-prolyl cis-trans isomerase D OS=Gibberella zeae GN=CPR6 PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.672e-42
Identity = 91/166 (54.82%), Postives = 110/166 (66.27%), Query Frame = 1
Query:    7 IAGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYG-------YKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESVETSRTDYPKVPCRIINSGELPLDA 483
            I GK  GRI M L+ D+VPKTA+NFR+LCT GEKG G       YKG  FHR+IK FMIQ             SIYG+ F+DE+F +KH  P +LSMANAGPNTNGSQFFI TV TP LD +HVVFG V++G  VVR++E++ T   D P     I++ GEL  DA
Sbjct:   19 IGGKSVGRITMELYADLVPKTADNFRSLCT-GEKGIGKSGKPLHYKGSVFHRVIKQFMIQGGDFTAGDGTGGESIYGNKFDDEAFPIKHEKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGEVLNGKSVVRQIENLTTQSGDRPAKEALIVDCGELTGDA 183          
BLAST of CX290065 vs. ExPASy Swiss-Prot
Match: CYPH_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=CYP PE=2 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 7.407e-42
Identity = 89/156 (57.05%), Postives = 104/156 (66.67%), Query Frame = 1
Query:    7 IAGKPAGRIVMGLFGDVVPKTAENFRALCTAGEKGYG-------YKGCSFHRIIKDFMIQXXXXXXXXXXXXISIYGSSFEDESFVLKHVGPGVLSMANAGPNTNGSQFFICTVKTPWLDNRHVVFGHVIDGMDVVRKLESV--ETSRTDYPKVPC 447
            +  K AGRIVM L+ D VP+TAENFRALCT GE+G G       YKG +FHR+I  FM Q             SIYG  F+DE+FV KH GPG+LSM NAG NTNGSQFFICT KT WLD +HVVFG V++GMDVVR +E V  ++ RT    V C
Sbjct:   12 VGDKAAGRIVMELYADTVPETAENFRALCT-GERGIGKSGKPLHYKGSAFHRVIPKFMCQGGDFTAGNGTGGESIYGMKFKDENFVKKHTGPGILSMRNAGSNTNGSQFFICTEKTSWLDGKHVVFGQVVEGMDVVRDIEKVGSDSGRTSKKVVTC 166          
The following BLAST results are available for this feature:
BLAST of CX290065 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 233
Match NameE-valueIdentityDescription
PPIA_FELCA2.546e-4262.41Peptidyl-prolyl cis-trans isomerase A OS=Felis cat... [more]
PPIA_BOVIN2.546e-4262.41Peptidyl-prolyl cis-trans isomerase A OS=Bos tauru... [more]
PPIE_SCHJA3.325e-4256.77Peptidyl-prolyl cis-trans isomerase E (Fragment) O... [more]
CYPH_LUPLU4.343e-4256.17Peptidyl-prolyl cis-trans isomerase OS=Lupinus lut... [more]
PPIE_MOUSE5.672e-4257.14Peptidyl-prolyl cis-trans isomerase E OS=Mus muscu... [more]
PPIE_BOVIN5.672e-4257.14Peptidyl-prolyl cis-trans isomerase E OS=Bos tauru... [more]
PPID_RAT5.672e-4258.5440 kDa peptidyl-prolyl cis-trans isomerase OS=Ratt... [more]
PPID_MOUSE5.672e-4258.5440 kDa peptidyl-prolyl cis-trans isomerase OS=Mus ... [more]
PPID_GIBZE5.672e-4254.82Peptidyl-prolyl cis-trans isomerase D OS=Gibberell... [more]
CYPH_BRANA7.407e-4257.05Peptidyl-prolyl cis-trans isomerase OS=Brassica na... [more]

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Properties
Property NameValue
Genbank descriptionC02020B04SK IF1 Citrus clementina cDNA clone C02020B04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290065 ID=CX290065; Name=CX290065; organism=Citrus clementina; type=EST; length=722bp
GGAGATATTGCAGGTAAACCTGCAGGTAGAATAGTAATGGGCCTTTTTGG
AGATGTTGTTCCGAAAACAGCTGAGAACTTTCGTGCACTGTGTACAGCAG
GTGAGAAAGGATATGGTTACAAAGGATGCTCCTTCCACCGTATTATTAAA
GATTTTATGATCCAGGGAGGGGACTTCACTGAGGGAGATGGAACTGGAGG
CATCAGTATTTATGGTTCCAGCTTTGAAGATGAGAGCTTTGTCTTGAAGC
ATGTTGGACCTGGAGTATTAAGCATGGCCAATGCAGGTCCTAATACCAAT
GGGAGCCAATTTTTCATTTGCACAGTGAAGACACCATGGTTGGACAACCG
CCATGTTGTGTTTGGACATGTCATTGATGGAATGGACGTTGTGAGGAAAC
TTGAATCTGTAGAGACAAGCAGGACAGATTACCCAAAGGTGCCATGTAGA
ATTATCAATAGTGGAGAACTACCATTAGATGCCTGATCTGCCAGCTCTGA
TATCTTACCACAACCATAAAATACGACTTTTGTAATTCATCACTTTTGTG
GAGCCAAATGGTTTTTGTAACTGTTATCTACATGAAAGCATGTTCCGCTT
AGTTGAATTAGCTGAGAAACTCAAGAATAATACTCGGTAAGCTCATGGTA
GAGCTGAATATGTACTATTGTTCGGTTGAATGTATATGTGCAGATTCCAC
TTGTAGTAAACAGTCAATAATA
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