CX290067

Overview
NameCX290067
Unique NameCX290067
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length670
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9909 contig Ccv1_Contig9909:715..1385. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290067 vs. ExPASy Swiss-Prot
Match: METK2_CATRO (S-adenosylmethionine synthetase 2 OS=Catharanthus roseus GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.167e-91
Identity = 165/189 (87.30%), Postives = 173/189 (91.53%), Query Frame = 1
Query:    1 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 567
            EIAADLKEHVIKPV+PEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGM+ INLDLKRGGN RFLKTAAYGHFGR+DPDFTWEVVKPLK+EK +A
Sbjct:  205 EIAADLKEHVIKPVVPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKFEKVEA 393          
BLAST of CX290067 vs. ExPASy Swiss-Prot
Match: METK2_BRAJU (S-adenosylmethionine synthetase 2 OS=Brassica juncea GN=MSAMS2 PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.167e-91
Identity = 168/189 (88.89%), Postives = 172/189 (91.01%), Query Frame = 1
Query:    1 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 567
            EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEIL+IVKESFDFRPGM++INLDLKRGGNGRFLKTAAYGHFGRDD DFTWEVVKPLK  K QA
Sbjct:  205 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILEIVKESFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDADFTWEVVKPLKSNKVQA 393          
BLAST of CX290067 vs. ExPASy Swiss-Prot
Match: METK4_VITVI (S-adenosylmethionine synthetase 4 OS=Vitis vinifera GN=METK4 PE=3 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 1.991e-91
Identity = 165/188 (87.77%), Postives = 171/188 (90.96%), Query Frame = 1
Query:    1 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 564
            EIAADLKEHVIKP++PEK+LDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPDKEILKIVKESFDFRPGM+ INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK EK Q
Sbjct:  205 EIAADLKEHVIKPIVPEKFLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYATGKIPDKEILKIVKESFDFRPGMIAINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKAEKAQ 392          
BLAST of CX290067 vs. ExPASy Swiss-Prot
Match: METK3_ORYSJ (S-adenosylmethionine synthetase 3 OS=Oryza sativa subsp. japonica GN=METK3 PE=2 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 4.435e-91
Identity = 162/189 (85.71%), Postives = 171/189 (90.48%), Query Frame = 1
Query:    1 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 567
            EIAADLKEHVIKPVIPE+YLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYI RQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPD+EIL+IV E+FDFRPGM+ INLDL RGGNGR+LKTAAYGHFGR+DPDFTWEVVKPLKWE+P A
Sbjct:  208 EIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILRIVTENFDFRPGMIIINLDLMRGGNGRYLKTAAYGHFGREDPDFTWEVVKPLKWEEPSA 396          
BLAST of CX290067 vs. ExPASy Swiss-Prot
Match: METK2_PICSI (S-adenosylmethionine synthetase 2 OS=Picea sitchensis GN=METK2 PE=2 SV=1)

HSP 1 Score: 333.954 bits (855), Expect = 4.435e-91
Identity = 162/189 (85.71%), Postives = 170/189 (89.95%), Query Frame = 1
Query:    1 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 567
            +IAADLKEHVIKPVIPEKYLDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA GLARRC+VQVSYAIGVPEPLSVFVDSYGTG IPDKEIL+++KE+FDFRPGM+TINLDLKRGGNGRF KTAAYGHFGRDDPDFTWE VKPLKW+K QA
Sbjct:  205 QIAADLKEHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVAAGLARRCLVQVSYAIGVPEPLSVFVDSYGTGSIPDKEILELIKENFDFRPGMITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWETVKPLKWDKAQA 393          
BLAST of CX290067 vs. ExPASy Swiss-Prot
Match: METK3_PETHY (S-adenosylmethionine synthetase 3 OS=Petunia hybrida GN=SAM3 PE=2 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 9.880e-91
Identity = 165/188 (87.77%), Postives = 169/188 (89.89%), Query Frame = 1
Query:    1 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 564
            EIA DLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKS+VANGLARRCIVQVSYAIGVPEPLSVFVD+YGTG IPDKEILKIVKE+FDFRPGM+ INLDLKRGGNGRFLKTAAYGHFGRDD DFTWEVVKPLK EK Q
Sbjct:  205 EIAHDLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGMIPDKEILKIVKENFDFRPGMIAINLDLKRGGNGRFLKTAAYGHFGRDDTDFTWEVVKPLKCEKAQ 392          
BLAST of CX290067 vs. ExPASy Swiss-Prot
Match: METK_POPDE (S-adenosylmethionine synthetase OS=Populus deltoides GN=METK PE=2 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 1.290e-90
Identity = 162/185 (87.57%), Postives = 170/185 (91.89%), Query Frame = 1
Query:    1 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWE 555
            EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHG++GLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEIL+IVKE FDFRPGM++INLDLKRGGN RFLKTAAYGHFGRDDPDFTWEVVKPLKW+
Sbjct:  206 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGESGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILQIVKERFDFRPGMISINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWEVVKPLKWD 390          
BLAST of CX290067 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 1.685e-90
Identity = 167/189 (88.36%), Postives = 171/189 (90.48%), Query Frame = 1
Query:    1 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 567
            EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVA+GLARR IVQVSYAIGVPEPLSVFVDSYGTGKIPDKEIL+IVKESFDFRPGM++INLDLKRGGNGRFLKTAAYGHFGRDD DFTWEVVKPLK  K QA
Sbjct:  205 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRVIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILEIVKESFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDADFTWEVVKPLKSNKVQA 393          
BLAST of CX290067 vs. ExPASy Swiss-Prot
Match: METK2_SUASA (S-adenosylmethionine synthetase 2 OS=Suaeda salsa GN=METK2 PE=2 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 1.685e-90
Identity = 163/189 (86.24%), Postives = 170/189 (89.95%), Query Frame = 1
Query:    1 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 567
            +IAADLKEHVIKPVIPEKYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYIVRQAAKSIVANGLARR IVQVSYAIGVPEPLSVFVD+YGTGKIPDK+ILKIVKE+FDFRPGM++INLDLKRGGN RF KTAAYGHFGRDDPDFTWE VKPLKWEK  A
Sbjct:  205 QIAADLKEHVIKPVIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRAIVQVSYAIGVPEPLSVFVDTYGTGKIPDKDILKIVKENFDFRPGMISINLDLKRGGNARFQKTAAYGHFGRDDPDFTWETVKPLKWEKVPA 393          
BLAST of CX290067 vs. ExPASy Swiss-Prot
Match: METK2_ORYSJ (S-adenosylmethionine synthetase 2 OS=Oryza sativa subsp. japonica GN=SAM2 PE=2 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 2.201e-90
Identity = 165/186 (88.71%), Postives = 171/186 (91.94%), Query Frame = 1
Query:    1 EIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEK 558
            EIAADLKEHVIKPVIP+KYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KDPTKVDRSGAYI RQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKE+FDFRPGMMTINLDLKRGGN RF+KTAAYGHFGR+DPDFTWEVVKPLK+EK
Sbjct:  207 EIAADLKEHVIKPVIPDKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKENFDFRPGMMTINLDLKRGGN-RFIKTAAYGHFGREDPDFTWEVVKPLKYEK 391          
The following BLAST results are available for this feature:
BLAST of CX290067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_CATRO1.167e-9187.30S-adenosylmethionine synthetase 2 OS=Catharanthus ... [more]
METK2_BRAJU1.167e-9188.89S-adenosylmethionine synthetase 2 OS=Brassica junc... [more]
METK4_VITVI1.991e-9187.77S-adenosylmethionine synthetase 4 OS=Vitis vinifer... [more]
METK3_ORYSJ4.435e-9185.71S-adenosylmethionine synthetase 3 OS=Oryza sativa ... [more]
METK2_PICSI4.435e-9185.71S-adenosylmethionine synthetase 2 OS=Picea sitchen... [more]
METK3_PETHY9.880e-9187.77S-adenosylmethionine synthetase 3 OS=Petunia hybri... [more]
METK_POPDE1.290e-9087.57S-adenosylmethionine synthetase OS=Populus deltoid... [more]
METK4_ARATH1.685e-9088.36S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]
METK2_SUASA1.685e-9086.24S-adenosylmethionine synthetase 2 OS=Suaeda salsa ... [more]
METK2_ORYSJ2.201e-9088.71S-adenosylmethionine synthetase 2 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionC02020B06SK IF1 Citrus clementina cDNA clone C02020B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290067 ID=CX290067; Name=CX290067; organism=Citrus clementina; type=EST; length=670bp
GAAATTGCTGCTGACCTTAAGGAGCACGTCATTAAGCCTGTCATCCCCGA
GAAGTACCTTGATGAGAAGACCATCTTCCACCTTAATCCATCAGGTCGTT
TTGTCATTGGTGGGCCTCATGGTGATGCTGGTCTCACTGGACGTAAGATC
ATCATCGACACTTATGGTGGCTGGGGAGCCCATGGTGGCGGTGCTTTCTC
TGGAAAAGACCCTACTAAGGTGGATAGGAGTGGTGCATACATTGTTAGGC
AGGCTGCTAAGAGCATTGTTGCAAACGGGCTTGCTCGCAGGTGCATTGTC
CAAGTCTCCTATGCCATTGGTGTGCCTGAGCCATTGTCTGTTTTTGTGGA
CTCATATGGAACCGGCAAGATTCCTGACAAGGAGATCCTCAAAATTGTGA
AGGAAAGCTTTGATTTCAGGCCAGGAATGATGACCATCAATTTGGATCTC
AAAAGGGGCGGTAATGGCAGGTTCTTGAAGACTGCTGCCTATGGACACTT
TGGCAGGGATGACCCAGACTTCACTTGGGAAGTTGTGAAGCCCCTCAAGT
GGGAAAAGCCTCAAGCTTAAATTTGAGTTGAAAAGTGAAAACTATCCCTG
CTGTTCAAGTTTGCTTCTATTGGTAGTGGATGAATAATTTGAATATTATC
TTGCTGCTGCTTTGTAATAC
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