CX290073

Overview
NameCX290073
Unique NameCX290073
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length452
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX290073 vs. ExPASy Swiss-Prot
Match: RL29_SCHPO (60S ribosomal protein L29 OS=Schizosaccharomyces pombe GN=rpl29 PE=2 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 2.883e-12
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 3 
Query:   48 MAKSKNHTAHNQSYKAHKNGIKKPKKHRHTSTKGMDPKFLRNQRYARK 191
            MAKSKNHT HNQ+ KAH+NGIK+P+KHR+ S K  D KF RNQ++A +
Sbjct:    1 MAKSKNHTNHNQNKKAHRNGIKRPQKHRYDSLKYRDAKFRRNQKFANR 48
The following BLAST results are available for this feature:
BLAST of CX290073 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
RL29_SCHPO2.883e-1264.5860S ribosomal protein L29 OS=Schizosaccharomyces p... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC02020B12SK IF1 Citrus clementina cDNA clone C02020B12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290073 ID=CX290073; Name=CX290073; organism=Citrus clementina; type=EST; length=452bp
AAAATCTCTAGCACAGCCGCGAGCAGGGGTCTTTTCCTGAAAACGAGATG
GCAAAGTCAAAGAATCACACAGCGCATAACCAGTCTTACAAGGCTCACAA
GAACGGTATCAAGAAACCTAAGAAGCACCGCCACACTTCCACCAAAGGGA
TGGACCCAAAGTTCCTTAGGAACCAGAGGTATGCAAGGAAGCATAACAAG
CAAGGAGGTGAATCTGCTGCCGAGGAGTAGATGCTGTTATGGGGTTTTAA
TTACTTAGTTGTTAAGATTTTTTTTACCCCTTGAATGGATATCTGTTTTG
TTTTTGTTATTGTAGTGATTTGATGGCACTCTAGTGGGTTTCATTTCAAT
TTCAAGTATCTGCTGAATCGTTAAGCTATGTTTGTTTACTGATGTGATAA
TTGCTAAAGATTATTAAACTTTGNAAAAAAAAAAAAAAAAAAAAAAAAAA
AA
back to top