CX290074

Overview
NameCX290074
Unique NameCX290074
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP42_ARATH (Serine carboxypeptidase-like 42 OS=Arabidopsis thaliana GN=SCPL42 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.223e-16
Identity = 46/125 (36.80%), Postives = 65/125 (52.00%), Query Frame = 3
Query:   33 YRIENPSKP--WPIILWLQGGPGASGVGIGNFEEVGPL-----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            Y +E   +P   P+ LWL GGPG S +G G F E+GP         L+  + +W K + LLFV++P G G+SY   +S +   D   AND+   L+  F K   L+   LF+  ESY G +   L
Sbjct:   64 YYVEAVKQPDSKPLTLWLNGGPGCSSIGGGAFTELGPFYPTGDGRGLRVNSMSWNKASHLLFVESPAGVGWSYSNKSSDYNTGDKSTANDMLVFLLRWFEKFPKLKSRDLFLTGESYAGHYIPQL 188          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: CPVL_HUMAN (Probable serine carboxypeptidase CPVL OS=Homo sapiens GN=CPVL PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.515e-16
Identity = 47/176 (26.70%), Postives = 80/176 (45.45%), Query Frame = 3
Query:   12 WWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPL----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVXXXXXXXXXXXXXXXXXXDSWISPEDFVFSWGPLLKDMSRLD 527
            +W + +  + E+     P++LWLQGGPG S +  G F E GP     +  L+ R+  W     +L++DNPVGTG+S+ +D   +  N+ + A DL + L++ F      + +  ++  ESY GK+   +                       D +  PE  +  +   L  +  LD
Sbjct:   90 FWFFPAQIQPEDA----PVVLWLQGGPGGSSM-FGLFVEHGPYVVTSNMTLRDRDFPWTTTLSMLYIDNPVGTGFSFTDDTHGYAVNEDDVARDLYSALIQFFQIFPEYKNNDFYVTGESYAGKYVPAIAHLIHSLNPVREVKINLNGIAIGDGYSDPESIIGGYAEFLYQIGLLD 260          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP20_ARATH (Serine carboxypeptidase-like 20 OS=Arabidopsis thaliana GN=SCPL20 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 9.408e-16
Identity = 47/141 (33.33%), Postives = 74/141 (52.48%), Query Frame = 3
Query:    9 LWWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPLDTYLKPRNST----------WLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAV 401
            LW+ +    +  NPSK  P++LWL GGPG S +  G   E GP +  L  +N++          W K ++++++D+PVG G+SY  + S ++  D++ A D    L++ F      Q +P FI  ESY G +  TL    V
Sbjct:   64 LWYYFIESEK--NPSKD-PVVLWLNGGPGCSSMD-GFVYEHGPFNFELPKKNNSLPLLHLNPYSWSKVSNIIYLDSPVGVGFSYSNNKSDYITGDIKTAVDSHAFLLKWFQMFPEFQSNPFFISGESYAGVYVPTLASEVV 200          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: CPVL_PONAB (Probable serine carboxypeptidase CPVL OS=Pongo abelii GN=CPVL PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.408e-16
Identity = 47/176 (26.70%), Postives = 80/176 (45.45%), Query Frame = 3
Query:   12 WWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPL----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVXXXXXXXXXXXXXXXXXXDSWISPEDFVFSWGPLLKDMSRLD 527
            +W + +  + E+     P++LWLQGGPG S +  G F E GP     +  L+ R+  W     +L++DNPVGTG+S+ +D   +  N+ + A DL + L++ F      + +  ++  ESY GK+   +                       D +  PE  +  +   L  +  LD
Sbjct:   90 FWFFPAQIQPEDA----PVVLWLQGGPGFSSM-FGLFVEHGPYVVTSNMTLRDRDFPWTTTLSMLYIDNPVGTGFSFTDDTHGYAVNEDDVAQDLYSALIQFFQIFPEYKNNDFYVTGESYAGKYVPAIAHLIHSLNPVREVKINLKGIAIGDGYSDPESIIGGYAEFLYQIGLLD 260          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP46_ARATH (Serine carboxypeptidase-like 46 OS=Arabidopsis thaliana GN=SCPL46 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.040e-14
Identity = 46/124 (37.10%), Postives = 66/124 (53.23%), Query Frame = 3
Query:   33 YRIENPSKPW--PIILWLQGGPGASGVGIGNFEEVGPL---DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFV-KNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            Y  E  +KP   P++LWL GGPG S +G+G F E GP     + L     +W ++A++L+++ PVG G+SY  ++SS+   ND   A D    L + F K        LFI  ESY G +   L
Sbjct:   65 YLAEAETKPISKPLVLWLNGGPGCSSLGVGAFSENGPFRPKGSILVRNQHSWNQEANMLYLETPVGVGFSYANESSSYEGVNDKITAKDNLVFLQKWFLKFPQYLNRSLFITGESYAGHYVPQL 188          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP31_ARATH (Serine carboxypeptidase-like 31 OS=Arabidopsis thaliana GN=SCPL31 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.040e-14
Identity = 46/117 (39.32%), Postives = 65/117 (55.56%), Query Frame = 3
Query:   54 KPWPIILWLQGGPGASGVGIGNFEEVGP--LDTY---LKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVK-NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            K  P++LWL GGPG S VG G  +E+GP  +DT    L      W K+A++LF+++PVG G+SY   +S + K  D   A D  T L   F K    +++  +I  ESY GK+   L
Sbjct:   91 KEKPLVLWLNGGPGCSSVGYGATQEIGPFLVDTNGNGLNFNPYAWNKEANMLFLESPVGVGFSYSNTSSDYQKLGDDFTARDAYTFLCNWFEKFPEHKENTFYIAGESYAGKYVPEL 207          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP44_ARATH (Serine carboxypeptidase-like 44 OS=Arabidopsis thaliana GN=SCPL44 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.358e-14
Identity = 43/125 (34.40%), Postives = 61/125 (48.80%), Query Frame = 3
Query:   33 YRIENPSKPW--PIILWLQGGPGASGVGIGNFEEVGPLDTY-----LKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            Y +E   +P   P+ LWL GGPG S +G G F E+GP         L+    +W K ++LLFVD+P G G+SY    S +   D   A D+   ++    K    +   LF+  ESY G +   L
Sbjct:   69 YFVEAEKQPHSKPLTLWLNGGPGCSSIGGGAFTELGPFYPTGDARGLRRNPKSWNKASNLLFVDSPAGVGWSYSNTTSDYTTGDESTAKDMLVFMLRWLEKFPQFKTRNLFLAGESYAGHYVPQL 193          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP34_ARATH (Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana GN=SCPL34 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.774e-14
Identity = 45/132 (34.09%), Postives = 67/132 (50.76%), Query Frame = 3
Query:   12 WWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPL------DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVK-NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            +W +++    +NPSK  P++LWL GGPG S +G G  EE+GP          LK    +W K A+LLF+++PVG G+SY   +    +  D   A D    L+  F +    +    +I  ESY G +   L
Sbjct:   82 YWFFEAT---QNPSKK-PVLLWLNGGPGCSSIGFGAAEELGPFFPQNSSQPKLKLNPYSWNKAANLLFLESPVGVGFSYTNTSRDIKQLGDTVTARDSYNFLVNWFKRFPQYKSHDFYIAGESYAGHYVPQL 209          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP32_ARATH (Serine carboxypeptidase-like 32 OS=Arabidopsis thaliana GN=SCPL32 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.774e-14
Identity = 43/114 (37.72%), Postives = 61/114 (53.51%), Query Frame = 3
Query:   63 PIILWLQGGPGASGVGIGNFEEVGPL-----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVK-NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            P++LWL GGPG S VG G  +E+GP         LK     W K+A++LF+++P G G+SY   +S + K  D   A D  T L + F +    ++   FI  ESY GK+   L
Sbjct:   75 PLVLWLNGGPGCSSVGYGATQEIGPFLVDNKGNSLKFNPYAWNKEANILFLESPAGVGFSYSNTSSDYRKLGDDFTARDSYTFLQKWFLRFPAYKEKDFFIAGESYAGKYVPEL 188          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: CPVL_RAT (Probable serine carboxypeptidase CPVL OS=Rattus norvegicus GN=CPVL PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.774e-14
Identity = 52/217 (23.96%), Postives = 93/217 (42.86%), Query Frame = 3
Query:   63 PIILWLQGGPGASGVGIGNFEEVGPL----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVXXXXXXXXXXXXXXXXXXDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVSATDSWAQL--------ESVISQNSNSVDFYNFL 677
            P++LWLQGGPG S +  G F E GP     +  +  R+  W     +L++DNPVGTG+S+ +    +  ++ + A DL + L++ F       K+  +I  ESY GK+   +                       D++  PE  +  +   L ++  LD        +  +K  + ++  E++ A +   +L         S     +   ++YN L
Sbjct:  105 PVVLWLQGGPGGSSM-FGLFVEHGPYIITSNMTVLSRDFPWTFSLSMLYIDNPVGTGFSFTDHIQGYAIDEDDVAQDLYSALVQFFKLFPEYAKNDFYITGESYAGKYVPAIAYYIHSLNPVRRFKIRLKGIALGDAYTDPETIIGGYATFLYEVGLLDEQQRRHFRKQCRKCIKYIKEQEWMKAFEVLDELLDGDLTAGPSFFQNVTGCTNYYNIL 320          
The following BLAST results are available for this feature:
BLAST of CX290074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
SCP42_ARATH4.223e-1636.80Serine carboxypeptidase-like 42 OS=Arabidopsis tha... [more]
CPVL_HUMAN5.515e-1626.70Probable serine carboxypeptidase CPVL OS=Homo sapi... [more]
SCP20_ARATH9.408e-1633.33Serine carboxypeptidase-like 20 OS=Arabidopsis tha... [more]
CPVL_PONAB9.408e-1626.70Probable serine carboxypeptidase CPVL OS=Pongo abe... [more]
SCP46_ARATH1.040e-1437.10Serine carboxypeptidase-like 46 OS=Arabidopsis tha... [more]
SCP31_ARATH1.040e-1439.32Serine carboxypeptidase-like 31 OS=Arabidopsis tha... [more]
SCP44_ARATH1.358e-1434.40Serine carboxypeptidase-like 44 OS=Arabidopsis tha... [more]
SCP34_ARATH1.774e-1434.09Serine carboxypeptidase-like 34 OS=Arabidopsis tha... [more]
SCP32_ARATH1.774e-1437.72Serine carboxypeptidase-like 32 OS=Arabidopsis tha... [more]
CPVL_RAT1.774e-1423.96Probable serine carboxypeptidase CPVL OS=Rattus no... [more]

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Properties
Property NameValue
Genbank descriptionC02020C01SK IF1 Citrus clementina cDNA clone C02020C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290074 ID=CX290074; Name=CX290074; organism=Citrus clementina; type=EST; length=735bp
ACACATGTCTTTGGTGGCTATATAAGAGTCCATACAGAATTGAAAATCCC
TCAAAGCCGTGGCCTATCATTCTTTGGTTGCAAGGCGGCCCTGGTGCTTC
AGGAGTTGGGATTGGGAATTTTGAAGAGGTTGGGCCATTAGACACTTATT
TGAAGCCAAGGAATTCAACATGGTTGAAGAAAGCTGACCTATTATTTGTT
GACAATCCTGTGGGAACAGGATACAGCTATGTTGAGGATAATAGCTCGTT
TGTGAAAAACGATGTTGAGGCAGCAAATGATTTAACTACATTGCTAATGG
AGTTATTTAACAAGAATGAAATTCTGCAAAAGAGTCCTCTGTTTATTGTG
GCAGAGTCTTATGGAGGCAAATTTGCTGCAACTCTCGGACTGGCAGCCGT
TAAAGCCATTGAAGCTGGAAAGTTAAAGCTCAAACTTGGAGGAGTTGCCT
TGGGAGATAGTTGGATCTCACCAGAGGATTTTGTGTTTTCATGGGGGCCT
CTACTTAAAGATATGTCAAGGCTTGATACCAATGGCTTCGCAAAATCAAA
TCAAATAGCTCAAAAGATTAAGCAGCAGCTTGAAGCTGGTGAATTTGTTA
GTGCCACAGACTCATGGGCGCAACTTGAGAGTGTGATTAGTCAAAACAGC
AACTCTGTGGATTTTTACAATTTTCTACTGGATTCGGGCATGGACCCTGT
GTCTTTACAGCATCACATTAGCAGTAGGAGCTTCA
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