CX290074

Overview
NameCX290074
Unique NameCX290074
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: CPVL_MOUSE (Probable serine carboxypeptidase CPVL OS=Mus musculus GN=Cpvl PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.774e-14
Identity = 52/217 (23.96%), Postives = 92/217 (42.40%), Query Frame = 3
Query:   63 PIILWLQGGPGASGVGIGNFEEVGPL----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAVXXXXXXXXXXXXXXXXXXDSWISPEDFVFSWGPLLKDMSRLDTNGFAKSNQIAQKIKQQLEAGEFVSATDSWAQL--------ESVISQNSNSVDFYNFL 677
            P++LWLQGGPG S +  G F E GP     +  +  R+  W     +L++DNPVGTG+S+ +    +  ++ + A DL + L++ F       K+  ++  ESY GK+   L                       D++  PE  +  +   L ++  LD        +   K  + ++  E++ A +   +L         S     +   ++YN L
Sbjct:  105 PVVLWLQGGPGGSSM-FGLFVEHGPYIITSNMTVVARDFPWTFTLSMLYIDNPVGTGFSFTDHFQGYATSEDDVAQDLYSALIQFFTLFPEYAKNDFYVTGESYAGKYVPALAHYIHSLNPVRKFKIRLKGIAIGDAYTDPESIIGGYAAFLYEIGLLDEQQQKYFQKQCSKCVKYIKEQEWMKAFEILDKLLDGDVTTGSSFFQNVTGCTNYYNIL 320          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP27_ARATH (Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.026e-14
Identity = 46/131 (35.11%), Postives = 64/131 (48.85%), Query Frame = 3
Query:   12 WWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPL-----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSS-FVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            +WL +SP   +  S+P  ++LWL GGPG S V  G  EE+GP         L  +   W K A+LLF+++P G G+SY    S  +   D   A D    L+  F +    +    +IV ESY G F   L
Sbjct:   65 YWLVESPLARDPKSRP--LVLWLNGGPGCSSVAYGAAEEIGPFRVGSDGKTLHSKLYAWNKLANLLFLESPAGVGFSYSNTTSDLYTTGDQRTAEDSYIFLVNWFERFPQYKHREFYIVGESYAGHFVPQL 193          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP33_ARATH (Serine carboxypeptidase-like 33 OS=Arabidopsis thaliana GN=SCPL33 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.742e-14
Identity = 42/121 (34.71%), Postives = 64/121 (52.89%), Query Frame = 3
Query:   42 ENPSKPWPIILWLQGGPGASGVGIGNFEEVGPL-----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVK-NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            E+PS   P++LWL GGPG S +G G   E+GP       T L     +W+++A++LF+++PVG G+SY   +S     ND   A D    ++  F +    +    FI  ESY G ++  L
Sbjct:   72 ESPSTR-PLVLWLNGGPGCSSIGYGAASELGPFRVVENGTSLSFNQYSWVQEANMLFLESPVGVGFSYTNSSSDLENLNDAFVAEDAYNFMVAWFARYPQYKSRDFFIAGESYAGHYSPQL 191          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP29_ARATH (Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.742e-14
Identity = 48/138 (34.78%), Postives = 71/138 (51.45%), Query Frame = 3
Query:   12 WWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPLDTYLKPRNST-------WLKKADLLFVDNPVGTGYSYVEDNSSFVKN-DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLAAV 401
            +WL+++   +E+ +K  P++LWL GGPG S V  G  EE+GP   ++K    T       W + A++LF+D PVG GYSY   +S    N D   A D    L++   +    +    +IV ESY G +   L  A V
Sbjct:   69 YWLFEA---VED-AKSKPLVLWLNGGPGCSSVAYGEAEEIGPF--HIKADGKTLYLNQYSWNQAANILFLDAPVGVGYSYSNTSSDLKSNGDKRTAEDSLKFLLKWVERFPEYKGRDFYIVGESYAGHYIPQLSEAIV 200          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP26_ARATH (Serine carboxypeptidase-like 26 OS=Arabidopsis thaliana GN=SCPL26 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.742e-14
Identity = 47/133 (35.34%), Postives = 65/133 (48.87%), Query Frame = 3
Query:   12 WWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPLDTYLKPRNST-------WLKKADLLFVDNPVGTGYSYVEDNSS-FVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            +WL +SP   ENP    P++LWL GGPG S V  G  EE+GP    + P   T       W K A+LLF+++P G G+SY    S  +   D   A D    L++ F +    +    +I  ESY G +   L
Sbjct:   61 YWLTESPPS-ENPESK-PLVLWLNGGPGCSSVAYGAAEEIGPF--RINPDGKTLYHNPYSWNKLANLLFLESPAGVGFSYSNTTSDLYTAGDQRTAEDAYVFLVKWFERFPQYKHREFYIAGESYAGHYVPQL 189          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: CPVL_DICDI (Probable serine carboxypeptidase CPVL OS=Dictyostelium discoideum GN=cpvl PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.742e-14
Identity = 43/125 (34.40%), Postives = 67/125 (53.60%), Query Frame = 3
Query:   12 WWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGP---LDTY-LKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 374
            +W  +S    +N  K  P++++LQGGPG +      F E GP   LD + L  R  TW  +  +L++DNPVGTG+S+ +    +  N+ E A +L T L + +        + L+I  ESY GK+
Sbjct:  119 FWFLES----QNGDKNSPLVIFLQGGPGGAST-FSLFVETGPYELLDNFTLVQREITWNSEFAMLYIDNPVGTGFSFTDSQEGYSNNEDEIATNLYTFLQQFYKLYPEYYTNELYITGESYAGKY 238          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP45_ARATH (Serine carboxypeptidase-like 45 OS=Arabidopsis thaliana GN=SCPL45 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.962e-13
Identity = 44/118 (37.29%), Postives = 60/118 (50.85%), Query Frame = 3
Query:   45 NPSKPWPIILWLQGGPGASGVGIGNFEEVGPL---DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFV-KNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            NPS   P++LWL GGPG S +G+G F E GP       L     +W ++A++L+++ PVG G+SY   +S +   ND   A D    L   F K        LFI  ESY G +   L
Sbjct:   70 NPSSK-PLVLWLNGGPGCSSLGVGAFSENGPFRPKGPILVKNQHSWNQEANMLYLETPVGVGFSYSTQSSHYEGVNDKITARDNLVFLQRWFLKFPHYLNRSLFITGESYAGHYVPQL 186          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP47_ARATH (Serine carboxypeptidase-like 47 OS=Arabidopsis thaliana GN=SCPL47 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.562e-13
Identity = 40/112 (35.71%), Postives = 58/112 (51.79%), Query Frame = 3
Query:   63 PIILWLQGGPGASGVGIGNFEEVGPL----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            P+++WL GGPG S   +  F E GP     D  L   +  W K +++++VD PVGTG+SY  D S    ++   +NDL   L   F ++    K+  FI  ESY G +   L
Sbjct:  127 PVVIWLTGGPGCSS-SVAMFYENGPFKISKDLSLYWNDFGWDKVSNIIYVDQPVGTGFSYTSDESDIRNDEDGVSNDLYDFLQAFFKEHPKFVKNDFFITGESYAGHYIPAL 237          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCPL2_DICDI (Serine carboxypeptidase S10 family member 2 OS=Dictyostelium discoideum GN=DDB_G0280105 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.346e-13
Identity = 43/129 (33.33%), Postives = 61/129 (47.29%), Query Frame = 3
Query:   12 WWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPLDTYLKPRNS--------TWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 374
            +W + +   + NP    P+++WL GGPG S +    F E GPL       NS        +W   A++L++D P GTG S+V DN   V ND+E   +    + E F         P FI  ESY G +
Sbjct:  104 FWFFPANETVINPMDA-PLLVWLNGGPGCSSMD-SVFIETGPLRFIGDSDNSDKFYINPWSWHNSANMLYIDQPFGTGLSFVSDNDGLVTNDLEINQNFYQFIQEFFQIFSNYSTLPFFISGESYAGHY 230          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP23_ARATH (Putative serine carboxypeptidase-like 23 OS=Arabidopsis thaliana GN=SCPL23 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.346e-13
Identity = 43/131 (32.82%), Postives = 66/131 (50.38%), Query Frame = 3
Query:   12 WWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPL-----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFV-KNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            +WL +SP    + S   P++LWL GGPG S +G G  EE+GP       + L     TW  +A++LF+++P G G+SY   +S      D   A +    L++  ++    Q    +IV ESY G +   L
Sbjct:   61 YWLTESP----SSSHTKPLLLWLNGGPGCSSIGYGASEEIGPFRINKTGSNLYLNKFTWNTEANILFLESPAGVGFSYTNTSSDLKDSGDERTAQENLIFLIKWMSRFPQYQYRDFYIVGESYAGHYVPQL 187          
The following BLAST results are available for this feature:
BLAST of CX290074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CPVL_MOUSE1.774e-1423.96Probable serine carboxypeptidase CPVL OS=Mus muscu... [more]
SCP27_ARATH3.026e-1435.11Serine carboxypeptidase-like 27 OS=Arabidopsis tha... [more]
SCP33_ARATH6.742e-1434.71Serine carboxypeptidase-like 33 OS=Arabidopsis tha... [more]
SCP29_ARATH6.742e-1434.78Serine carboxypeptidase-like 29 OS=Arabidopsis tha... [more]
SCP26_ARATH6.742e-1435.34Serine carboxypeptidase-like 26 OS=Arabidopsis tha... [more]
CPVL_DICDI6.742e-1434.40Probable serine carboxypeptidase CPVL OS=Dictyoste... [more]
SCP45_ARATH1.962e-1337.29Serine carboxypeptidase-like 45 OS=Arabidopsis tha... [more]
SCP47_ARATH2.562e-1335.71Serine carboxypeptidase-like 47 OS=Arabidopsis tha... [more]
SCPL2_DICDI3.346e-1333.33Serine carboxypeptidase S10 family member 2 OS=Dic... [more]
SCP23_ARATH3.346e-1332.82Putative serine carboxypeptidase-like 23 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionC02020C01SK IF1 Citrus clementina cDNA clone C02020C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290074 ID=CX290074; Name=CX290074; organism=Citrus clementina; type=EST; length=735bp
ACACATGTCTTTGGTGGCTATATAAGAGTCCATACAGAATTGAAAATCCC
TCAAAGCCGTGGCCTATCATTCTTTGGTTGCAAGGCGGCCCTGGTGCTTC
AGGAGTTGGGATTGGGAATTTTGAAGAGGTTGGGCCATTAGACACTTATT
TGAAGCCAAGGAATTCAACATGGTTGAAGAAAGCTGACCTATTATTTGTT
GACAATCCTGTGGGAACAGGATACAGCTATGTTGAGGATAATAGCTCGTT
TGTGAAAAACGATGTTGAGGCAGCAAATGATTTAACTACATTGCTAATGG
AGTTATTTAACAAGAATGAAATTCTGCAAAAGAGTCCTCTGTTTATTGTG
GCAGAGTCTTATGGAGGCAAATTTGCTGCAACTCTCGGACTGGCAGCCGT
TAAAGCCATTGAAGCTGGAAAGTTAAAGCTCAAACTTGGAGGAGTTGCCT
TGGGAGATAGTTGGATCTCACCAGAGGATTTTGTGTTTTCATGGGGGCCT
CTACTTAAAGATATGTCAAGGCTTGATACCAATGGCTTCGCAAAATCAAA
TCAAATAGCTCAAAAGATTAAGCAGCAGCTTGAAGCTGGTGAATTTGTTA
GTGCCACAGACTCATGGGCGCAACTTGAGAGTGTGATTAGTCAAAACAGC
AACTCTGTGGATTTTTACAATTTTCTACTGGATTCGGGCATGGACCCTGT
GTCTTTACAGCATCACATTAGCAGTAGGAGCTTCA
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