CX290074

Overview
NameCX290074
Unique NameCX290074
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP35_ARATH (Serine carboxypeptidase-like 35 OS=Arabidopsis thaliana GN=SCPL35 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 9.735e-13
Identity = 42/131 (32.06%), Postives = 69/131 (52.67%), Query Frame = 3
Query:   12 WWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPLDTY-----LKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVK-NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            +W +++    +N S+  P++LWL GGPG S +  G  +E+GP   +     L   + +W K+A++LF++ PVG G+SY  ++    K  D   A+D    L+  F K    + S  +I  ESY G +   L
Sbjct:   71 YWFFEAQ---QNSSRR-PLVLWLNGGPGCSSIAYGAAQELGPFLVHDNGGKLTYNHFSWNKEANMLFLEAPVGVGFSYTNNSMDLQKLGDEVTASDSLAFLINWFMKFPEFRSSEFYISGESYAGHYVPQL 197          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP48_ARATH (Serine carboxypeptidase-like 48 OS=Arabidopsis thaliana GN=SCPL48 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.271e-12
Identity = 40/116 (34.48%), Postives = 60/116 (51.72%), Query Frame = 3
Query:   51 SKPWPIILWLQGGPGASGVGIGNFEEVGPL----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            +K  P+++WL GGPG S   +  F E GP     ++ L      W K ++L++VD PVGTG+SY  D S    ++   +NDL   L   F ++    K+  +I  ESY G +   L
Sbjct:  126 NKADPVVIWLTGGPGCSSE-LALFYENGPFTVSNNSSLSWNEFGWDKASNLIYVDQPVGTGFSYTSDQSDLRHDEDGVSNDLYDFLQAFFKEHPQFVKNDFYITGESYAGHYIPAL 240          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP30_ARATH (Putative serine carboxypeptidase-like 30 OS=Arabidopsis thaliana GN=SCPL30 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.271e-12
Identity = 43/117 (36.75%), Postives = 62/117 (52.99%), Query Frame = 3
Query:   54 KPWPIILWLQGGPGASGVGIGNFEEVGPL--DTYLKP---RNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVK-NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            K  P++LWL GGPG S VG G  +E+GP   DT  K        W K+ ++LF+++PVG G+SY   +S ++  +D  A  D  T L   F K    + +  +I  ESY G +   L
Sbjct:   85 KEKPLVLWLNGGPGCSSVGYGATQEIGPFLADTNEKGLIFNPYAWNKEVNMLFLESPVGVGFSYSNTSSDYLNLDDHFAKKDAYTFLCNWFEKFPEHKGNEFYIAGESYAGIYVPEL 201          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP22_ARATH (Serine carboxypeptidase-like 22 OS=Arabidopsis thaliana GN=SCPL22 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.169e-12
Identity = 40/116 (34.48%), Postives = 62/116 (53.45%), Query Frame = 3
Query:   63 PIILWLQGGPGASGVGIGNFEEVGPL-------DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKN-DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            P++LWL GGPG S +  G  EE+GP        + YL   N +W  +A+LLF+++PVG G+SY   +S F ++ D   A +    L+   ++    +    +IV ESY G +   L
Sbjct:   75 PLLLWLNGGPGCSSIAYGASEEIGPFRISKTGCNLYL--NNFSWNTEANLLFLESPVGVGFSYTNTSSDFEESGDERTAQENLIFLISWMSRFPQYRYRDFYIVGESYAGHYVPQL 188          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: CBP2_WHEAT (Serine carboxypeptidase 2 OS=Triticum aestivum GN=CBP2 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.169e-12
Identity = 41/120 (34.17%), Postives = 61/120 (50.83%), Query Frame = 3
Query:   51 SKPWPIILWLQGGPGASGVGIGNFEEVGPLDTYLKPRNS-------TWLKKADLLFVDNPVGTGYSYVEDNSS-FVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            ++P P++LWL GGPG S V  G  EE+G     +KPR +        W K A++LF+D+P G G+SY   +S  +   D   A+D    L + F +    +    +I  ESY G +   L
Sbjct:   50 AQPAPLVLWLNGGPGCSSVAYGASEELGAF--RVKPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPEL 167          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP49_ARATH (Serine carboxypeptidase-like 49 OS=Arabidopsis thaliana GN=SCPL49 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.833e-12
Identity = 40/111 (36.04%), Postives = 58/111 (52.25%), Query Frame = 3
Query:   54 KPWPIILWLQGGPGASGVGIGNFEEVGPL----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 374
            K  P+++WL GGPG S   +  F E GP     +  L      W + ++LL+VD PVGTG+SY  D S    ++   +NDL   L   F ++  L K+  +I  ESY G +
Sbjct:  125 KDAPVVIWLTGGPGCSSE-LAVFYENGPFKITSNMSLAWNEYGWDQVSNLLYVDQPVGTGFSYTTDKSDIRHDETGVSNDLYDFLQAFFAEHPKLAKNDFYITGESYAGHY 234          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP28_ARATH (Serine carboxypeptidase-like 28 OS=Arabidopsis thaliana GN=SCPL28 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.833e-12
Identity = 42/131 (32.06%), Postives = 61/131 (46.56%), Query Frame = 3
Query:   12 WWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPL-----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNS-SFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            +WL ++P     PS   P++LWL GGPG S +  G  EEVGP         L+     W K A++LF+D+P G G+SY   +S      D     D    L+    +    ++   +I  ESY G +   L
Sbjct:   69 YWLTEAP----RPSGTKPLVLWLNGGPGCSSIAYGASEEVGPFRVNPDGKTLRLNLYAWNKVANVLFLDSPAGVGFSYTNTSSDELTVGDKRTGEDAYRFLVRWLERFPEYKERAFYIAGESYAGHYIPEL 195          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: CBP22_HORVU (Serine carboxypeptidase II-2 (Fragment) OS=Hordeum vulgare GN=CXP;2-2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.699e-12
Identity = 41/136 (30.15%), Postives = 69/136 (50.74%), Query Frame = 3
Query:   12 WWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPL-------DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKN-DVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA 395
            +W +++ +   +P+   P++LWL GGPG S +  G  EEVGP          ++ P   +W + A++LF+D+PVG GYSY   ++  + N D   A D    L +   +    ++   ++  ESY G +   L  A
Sbjct:   32 YWFFEAAH---DPASK-PLLLWLNGGPGCSSIAFGVGEEVGPFHVNADGKGVHMNP--YSWNQVANILFLDSPVGVGYSYSNTSADILSNGDERTAKDSLVFLTKWLERFPQYKEREFYLTGESYAGHYVPQLAQA 161          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: CBP2_HORVU (Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CBP2 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.076e-11
Identity = 39/118 (33.05%), Postives = 57/118 (48.31%), Query Frame = 3
Query:   51 SKPWPIILWLQGGPGASGVGIGNFEEVG-----PLDTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSS-FVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            ++P P++LWL GGPG S V  G  EE+G     P    L      W K A++LF+D+P G G+SY   +S  +   D   A+D    L   F +    +    ++  ESY G +   L
Sbjct:   82 AQPAPLVLWLNGGPGCSSVAYGASEELGAFRVMPRGAGLVLNEYRWNKVANVLFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAAWFERFPHYKYREFYVAGESYAGHYVPEL 199          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP1_ARATH (Serine carboxypeptidase-like 1 OS=Arabidopsis thaliana GN=SCPL1 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.406e-11
Identity = 39/119 (32.77%), Postives = 56/119 (47.06%), Query Frame = 3
Query:   42 ENPSKPWPIILWLQGGPGASGVGIGNFEEVGPLDTYLKPRNST----------WLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGG 368
            E   K  P+ILWL GGPG S +  G   E GPL   L   N T          W K + ++F+D PVGTG+SY         +D   A  +   L +   K+++   +P ++  +SY G
Sbjct:   70 ERNPKEDPLILWLTGGPGCSAIS-GLLFENGPLTMKLDVYNGTLPSLVSTTYSWTKTSSIIFLDQPVGTGFSYSRTQQFNKPSDSGEAKRIHEFLQKWLGKHQVFSSNPFYVAGDSYSG 187          
The following BLAST results are available for this feature:
BLAST of CX290074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
SCP35_ARATH9.735e-1332.06Serine carboxypeptidase-like 35 OS=Arabidopsis tha... [more]
SCP48_ARATH1.271e-1234.48Serine carboxypeptidase-like 48 OS=Arabidopsis tha... [more]
SCP30_ARATH1.271e-1236.75Putative serine carboxypeptidase-like 30 OS=Arabid... [more]
SCP22_ARATH2.169e-1234.48Serine carboxypeptidase-like 22 OS=Arabidopsis tha... [more]
CBP2_WHEAT2.169e-1234.17Serine carboxypeptidase 2 OS=Triticum aestivum GN=... [more]
SCP49_ARATH2.833e-1236.04Serine carboxypeptidase-like 49 OS=Arabidopsis tha... [more]
SCP28_ARATH2.833e-1232.06Serine carboxypeptidase-like 28 OS=Arabidopsis tha... [more]
CBP22_HORVU3.699e-1230.15Serine carboxypeptidase II-2 (Fragment) OS=Hordeum... [more]
CBP2_HORVU1.076e-1133.05Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CB... [more]
SCP1_ARATH1.406e-1132.77Serine carboxypeptidase-like 1 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC02020C01SK IF1 Citrus clementina cDNA clone C02020C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290074 ID=CX290074; Name=CX290074; organism=Citrus clementina; type=EST; length=735bp
ACACATGTCTTTGGTGGCTATATAAGAGTCCATACAGAATTGAAAATCCC
TCAAAGCCGTGGCCTATCATTCTTTGGTTGCAAGGCGGCCCTGGTGCTTC
AGGAGTTGGGATTGGGAATTTTGAAGAGGTTGGGCCATTAGACACTTATT
TGAAGCCAAGGAATTCAACATGGTTGAAGAAAGCTGACCTATTATTTGTT
GACAATCCTGTGGGAACAGGATACAGCTATGTTGAGGATAATAGCTCGTT
TGTGAAAAACGATGTTGAGGCAGCAAATGATTTAACTACATTGCTAATGG
AGTTATTTAACAAGAATGAAATTCTGCAAAAGAGTCCTCTGTTTATTGTG
GCAGAGTCTTATGGAGGCAAATTTGCTGCAACTCTCGGACTGGCAGCCGT
TAAAGCCATTGAAGCTGGAAAGTTAAAGCTCAAACTTGGAGGAGTTGCCT
TGGGAGATAGTTGGATCTCACCAGAGGATTTTGTGTTTTCATGGGGGCCT
CTACTTAAAGATATGTCAAGGCTTGATACCAATGGCTTCGCAAAATCAAA
TCAAATAGCTCAAAAGATTAAGCAGCAGCTTGAAGCTGGTGAATTTGTTA
GTGCCACAGACTCATGGGCGCAACTTGAGAGTGTGATTAGTCAAAACAGC
AACTCTGTGGATTTTTACAATTTTCTACTGGATTCGGGCATGGACCCTGT
GTCTTTACAGCATCACATTAGCAGTAGGAGCTTCA
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