CX290074

Overview
NameCX290074
Unique NameCX290074
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length735
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: CBP1_HORVU (Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CBP1 PE=1 SV=4)

HSP 1 Score: 70.0922 bits (170), Expect = 1.406e-11
Identity = 41/129 (31.78%), Postives = 64/129 (49.61%), Query Frame = 3
Query:   33 YRIENPSKPW--PIILWLQGGPGASGV-------GIGNFEEVGPLDTYLKPRNS--TWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            Y +E+   P   P++LWL GGPG S         G  NFE  G + +  K   +   W K + ++++D+P G G SY ++ S +   D++ A D  T L++ F        +P +I  ESY G +  TL
Sbjct:   69 YVVESERDPGKDPVVLWLNGGPGCSSFDGFVYEHGPFNFESGGSVKSLPKLHLNPYAWSKVSTMIYLDSPAGVGLSYSKNVSDYETGDLKTATDSHTFLLKWFQLYPEFLSNPFYIAGESYAGVYVPTL 197          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SXA2_SCHPO (Carboxypeptidase sxa2 OS=Schizosaccharomyces pombe GN=sxa2 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.836e-11
Identity = 41/114 (35.96%), Postives = 63/114 (55.26%), Query Frame = 3
Query:   69 ILWLQGGPGASGVGIGNFEEVGPLD-TYLKPRNS----TWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGLA 395
            I+WLQGGPG +G  +G F E GP++ +   P  S    +W   A++L++D P GTGYS  +  +++     EA++D    L   + K   L K  L++V ESYG  ++A    A
Sbjct:  102 IVWLQGGPGCAGT-LGFFSENGPIEISQSSPSPSLNPESWTNFANMLWLDQPFGTGYS--QGQAAYTTTIEEASSDFVNALKSFYQKFPHLMKKKLYLVGESYGSIWSANFAEA 212          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP39_ARATH (Serine carboxypeptidase-like 39 OS=Arabidopsis thaliana GN=SCPL39 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 40/117 (34.19%), Postives = 60/117 (51.28%), Query Frame = 3
Query:   54 KPWPIILWLQGGPGASGVGIGNFEEVGPLDTY-----LKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVK-NDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            K  P++LWL GGPG S +  G F+E+GP   Y     L     +W   A++LF+++PVGTG+SY    S      D++AA D    L++   +    +    +I  ESY G +   L
Sbjct:  120 KSLPLVLWLNGGPGCSSL-YGAFQELGPFRIYGDGKTLYTNPYSWNNVANILFLESPVGTGFSYTNTESDLENPGDMKAAADKYIFLVKWLERFPEYKGREFYIAGESYAGHYVPQL 235          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP24_ARATH (Serine carboxypeptidase 24 OS=Arabidopsis thaliana GN=SCPL24 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 38/114 (33.33%), Postives = 55/114 (48.25%), Query Frame = 3
Query:   63 PIILWLQGGPGASGVGIGNFEEVGPL-----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFV-KNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            P++LWL GGPG S +  G  EE+GP       + L      W K A+LLF+++P G GYSY   +S      D   A D    L++  ++    +    +I  ESY G +   L
Sbjct:   77 PLLLWLNGGPGCSSIAYGASEEIGPFRINKTGSNLYLNKFAWNKDANLLFLESPAGVGYSYTNTSSDLKDSGDERTAQDNLIFLIKWLSRFPQYKYRDFYIAGESYAGHYVPQL 190          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: CBP1_ORYSJ (Serine carboxypeptidase 1 OS=Oryza sativa subsp. japonica GN=CBP1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.398e-11
Identity = 41/129 (31.78%), Postives = 64/129 (49.61%), Query Frame = 3
Query:   33 YRIENPSKPW--PIILWLQGGPGASGV-------GIGNFEEVGPLDTYLKPRNS--TWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            Y +E+   P   P++LWL GGPG S         G  NFE  G   +  K   +  +W K + ++++D+P G G SY ++ S +   D++ A D  T L++ F        +P +I  ESY G +  TL
Sbjct:   75 YLVESERDPAKDPLVLWLNGGPGCSSFDGFVYEHGPFNFESGGSAKSLPKLHLNPYSWSKVSSVIYLDSPAGVGLSYSKNTSDYNTGDLKTAADSHTFLLKWFQLYPEFLSNPFYIAGESYAGVYVPTL 203          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: SCP5_ARATH (Serine carboxypeptidase-like 5 OS=Arabidopsis thaliana GN=SCPL5 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11
Identity = 39/119 (32.77%), Postives = 58/119 (48.74%), Query Frame = 3
Query:   42 ENPSKPWPIILWLQGGPGASGVGIGNFEEVGPL----DTY------LKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGG 368
            E   K  P++LWL GGPG S +  G   E GPL    D Y      L P   +W K + ++F+D PVGTG+SY         +D   A  +   L +  +K++    +P ++  +SY G
Sbjct:   69 ERNPKEDPLLLWLSGGPGCSSIS-GLLFENGPLAMKLDVYNGTLPSLVPTTYSWTKTSSMIFLDQPVGTGFSYSRTQQYNKPSDSGEAKRIHEFLQKWLSKHQEFSSNPFYVAGDSYSG 186          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: CBP3_HORVU (Serine carboxypeptidase 3 OS=Hordeum vulgare GN=CBP3 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11
Identity = 38/108 (35.19%), Postives = 55/108 (50.93%), Query Frame = 3
Query:   63 PIILWLQGGPGASGVGIGNFEEVGPL----DTYLKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKF 374
            P+++WL GGPG S   +  F E GP     +  L      W K ++++FVD P GTG+SY  D+     ++   +NDL   L   F K+    K+  FI  ESY G +
Sbjct:  122 PVVIWLTGGPGCSSE-LAVFYENGPFTIANNMSLVWNKFGWDKISNIIFVDQPTGTGFSYSSDDRDTRHDETGVSNDLYDFLQVFFKKHPEFIKNDFFITGESYAGHY 228          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: YXD2_CAEEL (Uncharacterized serine carboxypeptidase C08H9.1 OS=Caenorhabditis elegans GN=C08H9.1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 41/119 (34.45%), Postives = 61/119 (51.26%), Query Frame = 3
Query:   66 IILWLQGGPGASGVGIGNFEEVGPLDTYLKPRN-----STWLKKADLLFVDNPVGTGYSYVEDNSSFVK-NDVEAANDLTTLLMELF-NKNEILQKSPLFIVAESYGGKFAATLGLAAV 401
            +I+W  GGPG S +    FEE GPL      ++      +W  KA++LF+++P+G G+SY  + S+F K ND   A      +++ F  K+        FI AESYGG +   L    V
Sbjct:   69 LIIWFNGGPGCSSLS-AFFEEFGPLYVNFGGKSLFENVHSWYHKANILFLESPIGVGFSYDTEQSNFTKVNDDSIAEQNFNSVIDFFQRKHSSYVNHDFFIAAESYGGVYGPMLSALVV 186          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: YUA6_CAEEL (Uncharacterized serine carboxypeptidase F13S12.6 OS=Caenorhabditis elegans GN=F13D12.6 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 43/130 (33.08%), Postives = 65/130 (50.00%), Query Frame = 3
Query:   12 WWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPLDTY-----LKPRNSTWLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATL 386
            +W  +S     NPS   P++LWL GGPG SG+      E GP +       L+    +W K A +L ++ P G GYSY  DN +    D + A++    L+  FN+    + +  ++  ESYGG +  TL
Sbjct:   54 YWFVESQ---SNPSTD-PVLLWLTGGPGCSGLS-ALLTEWGPWNVNTDGATLRTNPYSWNKNASILTLEAPAGVGYSYATDN-NIATGDDQTASENWEALVAFFNEFPQYKGNDFYVTGESYGGIYVPTL 177          
BLAST of CX290074 vs. ExPASy Swiss-Prot
Match: PPGB_MOUSE (Lysosomal protective protein OS=Mus musculus GN=Ctsa PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.090e-11
Identity = 43/134 (32.09%), Postives = 67/134 (50.00%), Query Frame = 3
Query:   12 WWLYKSPYRIENPSKPWPIILWLQGGPGASGVGIGNFEEVGPLDTYLKPRNST-------WLKKADLLFVDNPVGTGYSYVEDNSSFVKNDVEAANDLTTLLMELFNKNEILQKSPLFIVAESYGGKFAATLGL 392
            +W  +S    +N  K  P++LWL GGPG S +  G   E GP    ++P   T       W   A++L++++P G G+SY  D+  +V ND E A +    L + F      + + LF+  ESY G +  TL +
Sbjct:   59 YWFVES----QNDPKNSPVVLWLNGGPGCSSLD-GLLTEHGPF--LIQPDGVTLEYNPYAWNLIANVLYIESPAGVGFSY-SDDKMYVTNDTEVAENNYEALKDFFRLFPEYKDNKLFLTGESYAGIYIPTLAV 184          
The following BLAST results are available for this feature:
BLAST of CX290074 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CBP1_HORVU1.406e-1131.78Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CB... [more]
SXA2_SCHPO1.836e-1135.96Carboxypeptidase sxa2 OS=Schizosaccharomyces pombe... [more]
SCP39_ARATH2.398e-1134.19Serine carboxypeptidase-like 39 OS=Arabidopsis tha... [more]
SCP24_ARATH2.398e-1133.33Serine carboxypeptidase 24 OS=Arabidopsis thaliana... [more]
CBP1_ORYSJ2.398e-1131.78Serine carboxypeptidase 1 OS=Oryza sativa subsp. j... [more]
SCP5_ARATH3.132e-1132.77Serine carboxypeptidase-like 5 OS=Arabidopsis thal... [more]
CBP3_HORVU3.132e-1135.19Serine carboxypeptidase 3 OS=Hordeum vulgare GN=CB... [more]
YXD2_CAEEL4.090e-1134.45Uncharacterized serine carboxypeptidase C08H9.1 OS... [more]
YUA6_CAEEL4.090e-1133.08Uncharacterized serine carboxypeptidase F13S12.6 O... [more]
PPGB_MOUSE4.090e-1132.09Lysosomal protective protein OS=Mus musculus GN=Ct... [more]

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Properties
Property NameValue
Genbank descriptionC02020C01SK IF1 Citrus clementina cDNA clone C02020C01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290074 ID=CX290074; Name=CX290074; organism=Citrus clementina; type=EST; length=735bp
ACACATGTCTTTGGTGGCTATATAAGAGTCCATACAGAATTGAAAATCCC
TCAAAGCCGTGGCCTATCATTCTTTGGTTGCAAGGCGGCCCTGGTGCTTC
AGGAGTTGGGATTGGGAATTTTGAAGAGGTTGGGCCATTAGACACTTATT
TGAAGCCAAGGAATTCAACATGGTTGAAGAAAGCTGACCTATTATTTGTT
GACAATCCTGTGGGAACAGGATACAGCTATGTTGAGGATAATAGCTCGTT
TGTGAAAAACGATGTTGAGGCAGCAAATGATTTAACTACATTGCTAATGG
AGTTATTTAACAAGAATGAAATTCTGCAAAAGAGTCCTCTGTTTATTGTG
GCAGAGTCTTATGGAGGCAAATTTGCTGCAACTCTCGGACTGGCAGCCGT
TAAAGCCATTGAAGCTGGAAAGTTAAAGCTCAAACTTGGAGGAGTTGCCT
TGGGAGATAGTTGGATCTCACCAGAGGATTTTGTGTTTTCATGGGGGCCT
CTACTTAAAGATATGTCAAGGCTTGATACCAATGGCTTCGCAAAATCAAA
TCAAATAGCTCAAAAGATTAAGCAGCAGCTTGAAGCTGGTGAATTTGTTA
GTGCCACAGACTCATGGGCGCAACTTGAGAGTGTGATTAGTCAAAACAGC
AACTCTGTGGATTTTTACAATTTTCTACTGGATTCGGGCATGGACCCTGT
GTCTTTACAGCATCACATTAGCAGTAGGAGCTTCA
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