CX290108
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290108 vs. ExPASy Swiss-Prot
Match: RS5_AZOSB (30S ribosomal protein S5 OS=Azoarcus sp. (strain BH72) GN=rpsE PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11 Identity = 45/134 (33.58%), Postives = 67/134 (50.00%), Query Frame = 1 Query: 22 VQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLL 423 V K + G+ F A VVGD DG +G+G S+EV A++ A+ A+ ++ V + T+ V GK G+ +V M PAP G GI+A + V + G+ D+ GST N V+AT L+ Sbjct: 29 VTKVVKGGRILGFAALTVVGDGDGGIGMGKGKSREVPVAVQKAMDEARRKMVKVSL--------KDGTLQHTVVGKHGAASVLMQPAPGGTGIIAGGPMRAVFEVMGVTDIICKCIGSTNPY-NVVRATLNGLM 153
BLAST of CX290108 vs. ExPASy Swiss-Prot
Match: RS5_AZOC5 (30S ribosomal protein S5 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=rpsE PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11 Identity = 50/135 (37.04%), Postives = 68/135 (50.37%), Query Frame = 1 Query: 22 VQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVI--PVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECL 420 V K + G+R F A V+VGD G VG G ++EV AIR A AK ++I P+R G T+ V G G+ V + AP G GI+A + V + G+ DV S GS+ N V+ATF+ L Sbjct: 28 VAKVVKGGRRFGFAALVIVGDQKGRVGFGHGKAREVPEAIRKATESAKRALIRVPLREG---------RTLHHDVHGHHGAGKVILRAAPAGTGIIAGGPMRAVFETLGVHDVVAKSFGSSNPY-NMVRATFDAL 152
BLAST of CX290108 vs. ExPASy Swiss-Prot
Match: RS5_ANADF (30S ribosomal protein S5 OS=Anaeromyxobacter sp. (strain Fw109-5) GN=rpsE PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11 Identity = 48/129 (37.21%), Postives = 70/129 (54.26%), Query Frame = 1 Query: 22 VQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKAT 408 V K + G+R F A VVVGD +G+VG+G+ + EV AIR AK ++ V +G T+P +V G G+ V + PA G G++A + VL+ AGI +V T +GS + N +KAT Sbjct: 22 VAKVVKGGRRFSFSALVVVGDGNGYVGVGLGKANEVPEAIRKGGDQAKKNLFKV------PLVGT--TIPHEVLGHFGAGWVLLKPAGEGTGVIAGGTVRAVLEAAGIRNVLTKCQGS-RNPHNVLKAT 141
BLAST of CX290108 vs. ExPASy Swiss-Prot
Match: RR5_CYAPA (30S ribosomal protein S5, cyanelle OS=Cyanophora paradoxa GN=rps5 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.621e-11 Identity = 42/145 (28.97%), Postives = 71/145 (48.97%), Query Frame = 1 Query: 22 VQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECL--LKTYGFLTPD 450 V K + G++ F+A VV+G+ G VG+G+ + +V A++ A K V+ V + R +++P + G G+ V M P+ G G++A + VL+ AG+ ++ GS L N +A L LKT+ D Sbjct: 27 VSKVVKGGKKLSFRAIVVIGNERGQVGVGIGKASDVINAVKKAAADGKKHVVEV-------PLTRSNSIPHPIDGIGGAARVIMRPSAEGTGVIAGGAVRTVLELAGVRNILAKQLGSNNPLNN-ARAAMNALSRLKTFSQFAKD 163 The following BLAST results are available for this feature:
BLAST of CX290108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 404
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290108 ID=CX290108; Name=CX290108; organism=Citrus clementina; type=EST; length=713bpback to top |