CX290117
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290117 vs. ExPASy Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.513e-13 Identity = 52/190 (27.37%), Postives = 89/190 (46.84%), Query Frame = 1 Query: 202 NLTKREKVALHDCLETIDETLDELHKAVEDLEEY---------PNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQS---SSVTPNAVVAADGSENFKTVGRSVAAAPQGGTKRYIIRI 735 ++ RE+VA+ DC E + ++ EL ++ ++ + + +LKT +SAAM+NQ TCL+GF + + + + V ++ SN L M T + + + S N + P WL+ D L+ S + PN VVA DG ++T+ ++ AP TKRY+I + Sbjct: 96 SIRSREQVAIEDCKELVGFSVTELAWSMLEMNKLHGGGGIDLDDGSHDAAAAGGNLKTWLSAAMSNQDTCLEGF--EGTERKYEELIKGSLRQVTQLVSNVLDMY---TQLNALPFKASRNESVIAS-------PEWLTETDESLMMRHDPSVMHPNTVVAIDGKGKYRTINEAINEAPNHSTKRYVIYV 273
BLAST of CX290117 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.511e-13 Identity = 51/168 (30.36%), Postives = 83/168 (49.40%), Query Frame = 1 Query: 229 LHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSS--SVTPNAVVAADGSENFKTVGRSVAAAPQGGTKRYI 726 ++DCLE +D+TLD L++ V K DD+ T +SAA+TNQ TC S + A+ ++ + +N+L M + + RKL + +P W+S DR+LL++S + P+AVVAADGS +V ++A+ +G + I Sbjct: 102 VNDCLELLDDTLDMLYRIVVI-------KRKDHVNDDVHTWLSAALTNQETCKQSLSEKSSFNKEGIAIDSFARNLTGLLTNSLDMFVSDKQKSSSSSNLTGGRKLLSD----HDFPTWVSSSDRKLLEASVEELRPHAVVAADGSGTHMSVAEALASLEKGSGRSVI 258
BLAST of CX290117 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.810e-13 Identity = 66/254 (25.98%), Postives = 118/254 (46.46%), Query Frame = 1 Query: 4 EPHHAILKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQV-HVEKMCSNALAMIK---NMTDT----DMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSSVTPNA--VVAADGSENFKTVGRSVAAAPQGGTKRYIIRI 735 EP +K+ C T + + CF + + P AS+ +S +++ + ++ +T T + G N T A+ C+E I +D+L++ + S ++ DDL+T +S+ T Q TC+D +ANK + + + +M SNALA+I + DT ++ T N + + + ++G RRLL+S + A VVA DGS ++T+G ++A + K II + Sbjct: 62 EPISVSVKALCDVTLHKEKCFETLGSAPNASR--SSPEELFKYAVKVTITELSKVLDGFSNGEHMDNAT---SAAMGACVELIGLAVDQLNETM---------TSSLKNFDDLRTWLSSVGTYQETCMDALV--EANKPSLTTFGENHLKNSTEMTSNALAIITWLGKIADTVKFRRRRLLETGNAKVVVADLPMMEG---------RRLLESGDLKKKATIVVAKDGSGKYRTIGEALAEVEEKNEKPTIIYV 290
BLAST of CX290117 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.185e-12 Identity = 67/246 (27.24%), Postives = 114/246 (46.34%), Query Frame = 1 Query: 28 SSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVI---EMSLNITTTAVEHNYFGIQKLLKRTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVH--VEKMCSNALAMIKNMTDTDMMIMR--TSNNRKLTEETSTVDG-------------WPAWLSPGDRRLLQSSSVTPNA--VVAADGSENFKTVGRSVAAA 699 +SC T YP +C ++ P K + Q D ++ ++ T + + L + +L K AL DCLE ++T+D+L+ + +Y S H D +T +SAA+ NQ TC +GF D Q H + K SN+LA+ K + + + + ++ K +++ S+ G +P+W DR+LL+ S T A VVA DGS ++ ++ ++V AA Sbjct: 36 TSCKQTPYPSVCDHHMSNSP--LKTLDDQTDGFTFHDLVVSSTMDQAVQLHRLVSSLKQHHSLHKHATSALFDCLELYEDTIDQLNHSRRSYGQYS-----SPH--DRQTSLSAAIANQDTCRNGF-RDFKLTSSYSKYFPVQFHRNLTKSISNSLAVTKAAAEAEAVAEKYPSTGFTKFSKQRSSAGGGSHRRLLLFSDEKFPSWFPLSDRKLLEDSKTTAKADLVVAKDGSGHYTSIQQAVNAA 271
BLAST of CX290117 vs. ExPASy Swiss-Prot
Match: PME23_ARATH (Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=PME23 PE=2 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 2.185e-12 Identity = 64/253 (25.30%), Postives = 120/253 (47.43%), Query Frame = 1 Query: 22 LKSSCSSTRYPDLCFSAI-AAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLK-RTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLT--------EETSTVDGWPAWLSPGDRRLLQSSSVTP-----NAVVAADGSENFKTVGRSVAAAPQGGTKRYIIRI 735 +++ C+ T + D C +++ A P++ V D+I++ +T ++ + +K + + K A C + + + +D+L K ++ + + +DL+ +S ++ Q TC+D F +N ++D L + E + SN+LAM+ ++ ++ SN LT + ST D P W+ P RRL+ + P NAVVA DG+ FKT+ ++ A P+G +II I Sbjct: 51 VQAVCAPTDFKDTCVNSLMGASPDSDDPV----DLIKLGFKVTIKSINESLEKASGDIKAKADKNPEAKGAFELCEKLMIDAIDDLKKC---MDHGFSVDQIEVFVEDLRVWLSGSIAFQQTCMDSFGEIKSNL-MQDMLKIFKTSRE-LSSNSLAMVTRIST----LIPNSNLTGLTGALAKYARKLLSTEDSIPTWVGPEARRLMAAQGGGPGPVKANAVVAQDGTGQFKTITDALNAVPKGNKVPFIIHI 290
BLAST of CX290117 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 9.182e-11 Identity = 50/186 (26.88%), Postives = 90/186 (48.39%), Query Frame = 1 Query: 211 KREKVALHDCLETIDETLDELHKAVEDLEEYPNK-KSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIM--------RTSNNRKL--TEETSTVDGWPAWLSPGDRRLLQSSSVTPNAVVAADGSENFKTVGRSVAAAPQGGTKRYIIRI 735 +R + A+ DCL+ +D + +EL + E K D +T +SAA++NQ TC++GF D + V+ ++ + M L +++ + + RKL T+E ++ +P W+ P DR+LL+S+ T + VA DG+ NF + ++ AP + R++I I Sbjct: 63 RRLQNAVSDCLDLLDFSSEELTWSASASENPKGKGNGTGDVGSDTRTWLSAALSNQATCMEGF--DGTSGLVKSLVAGSLDQLYSMLRELLPLVQPEQKPKAVSKPGPIAKGPKAPPGRKLRDTDEDESLQ-FPDWVRPDDRKLLESNGRTYDVSVALDGTGNFTKIMDAIKKAPDYSSTRFVIYI 245 The following BLAST results are available for this feature:
BLAST of CX290117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290117 ID=CX290117; Name=CX290117; organism=Citrus clementina; type=EST; length=737bpback to top |