CX290133

Overview
NameCX290133
Unique NameCX290133
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: GLC7A_CAEEL (Serine/threonine-protein phosphatase PP1-alpha OS=Caenorhabditis elegans GN=gsp-1 PE=2 SV=2)

HSP 1 Score: 312.383 bits (799), Expect = 7.065e-89
Identity = 138/168 (82.14%), Postives = 156/168 (92.86%), Query Frame = 2 
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVD 508
            ++YLFLGDYVDRGKQSLETICLLLAYK+KYPENFFLLRGNHECASINRIYGFYDECKRRF+++LWK FTDCFNCLP+AALIDEKI C HGGLSPDL +++Q+R + RPT VPDTGLLCDLLWSDP +DV GWG NDRGVS+TFGPD V++FL RHDLDL+CRAHQVV+
Sbjct:   85 ANYLFLGDYVDRGKQSLETICLLLAYKVKYPENFFLLRGNHECASINRIYGFYDECKRRFSIKLWKTFTDCFNCLPIAALIDEKIFCCHGGLSPDLQNMEQIRRVMRPTDVPDTGLLCDLLWSDPDKDVTGWGENDRGVSFTFGPDVVAKFLNRHDLDLICRAHQVVE 252

HSP 2 Score: 36.965 bits (84), Expect = 7.065e-89
Identity = 17/23 (73.91%), Postives = 18/23 (78.26%), Query Frame = 3 
Query:  603 CDLF*VVEDGYEFFADRQLVTIF 671
            C    VVEDGYEFFA RQLVT+F
Sbjct:  245 CRAHQVVEDGYEFFAKRQLVTLF 267
[Close]
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: GLC7A_CAEBR (Serine/threonine-protein phosphatase PP1-alpha OS=Caenorhabditis briggsae GN=gsp-1 PE=3 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 7.065e-89
Identity = 138/168 (82.14%), Postives = 156/168 (92.86%), Query Frame = 2 
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVD 508
            ++YLFLGDYVDRGKQSLETICLLLAYK+KYPENFFLLRGNHECASINRIYGFYDECKRRF+++LWK FTDCFNCLP+AALIDEKI C HGGLSPDL +++Q+R + RPT VPDTGLLCDLLWSDP +DV GWG NDRGVS+TFGPD V++FL RHDLDL+CRAHQVV+
Sbjct:   85 ANYLFLGDYVDRGKQSLETICLLLAYKVKYPENFFLLRGNHECASINRIYGFYDECKRRFSIKLWKTFTDCFNCLPIAALIDEKIFCCHGGLSPDLQNMEQIRRVMRPTDVPDTGLLCDLLWSDPDKDVTGWGENDRGVSFTFGPDVVAKFLNRHDLDLICRAHQVVE 252

HSP 2 Score: 36.965 bits (84), Expect = 7.065e-89
Identity = 17/23 (73.91%), Postives = 18/23 (78.26%), Query Frame = 3 
Query:  603 CDLF*VVEDGYEFFADRQLVTIF 671
            C    VVEDGYEFFA RQLVT+F
Sbjct:  245 CRAHQVVEDGYEFFAKRQLVTLF 267
[Close]
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP1B_XENTR (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Xenopus tropicalis GN=ppp1cb PE=2 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 9.216e-89
Identity = 138/168 (82.14%), Postives = 155/168 (92.26%), Query Frame = 2 
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVD 508
            ++YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN++LWK FTDCFNCLP+AA++DEKI C HGGLSPDL  ++Q+R + RPT VPDTGLLCDLLWSDP +DV+GWG NDRGVS+TFG D VS+FL RHDLDL+CRAHQVV+
Sbjct:   84 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVE 251

HSP 2 Score: 36.965 bits (84), Expect = 9.216e-89
Identity = 17/23 (73.91%), Postives = 18/23 (78.26%), Query Frame = 3 
Query:  603 CDLF*VVEDGYEFFADRQLVTIF 671
            C    VVEDGYEFFA RQLVT+F
Sbjct:  244 CRAHQVVEDGYEFFAKRQLVTLF 266
[Close]
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP1B_XENLA (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Xenopus laevis GN=ppp1cb PE=2 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 9.216e-89
Identity = 138/168 (82.14%), Postives = 155/168 (92.26%), Query Frame = 2 
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVD 508
            ++YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN++LWK FTDCFNCLP+AA++DEKI C HGGLSPDL  ++Q+R + RPT VPDTGLLCDLLWSDP +DV+GWG NDRGVS+TFG D VS+FL RHDLDL+CRAHQVV+
Sbjct:   84 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVE 251

HSP 2 Score: 36.965 bits (84), Expect = 9.216e-89
Identity = 17/23 (73.91%), Postives = 18/23 (78.26%), Query Frame = 3 
Query:  603 CDLF*VVEDGYEFFADRQLVTIF 671
            C    VVEDGYEFFA RQLVT+F
Sbjct:  244 CRAHQVVEDGYEFFAKRQLVTLF 266
[Close]
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP1B_RAT (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Rattus norvegicus GN=Ppp1cb PE=1 SV=3)

HSP 1 Score: 311.997 bits (798), Expect = 9.216e-89
Identity = 138/168 (82.14%), Postives = 155/168 (92.26%), Query Frame = 2 
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVD 508
            ++YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN++LWK FTDCFNCLP+AA++DEKI C HGGLSPDL  ++Q+R + RPT VPDTGLLCDLLWSDP +DV+GWG NDRGVS+TFG D VS+FL RHDLDL+CRAHQVV+
Sbjct:   84 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVE 251

HSP 2 Score: 36.965 bits (84), Expect = 9.216e-89
Identity = 17/23 (73.91%), Postives = 18/23 (78.26%), Query Frame = 3 
Query:  603 CDLF*VVEDGYEFFADRQLVTIF 671
            C    VVEDGYEFFA RQLVT+F
Sbjct:  244 CRAHQVVEDGYEFFAKRQLVTLF 266
[Close]
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP1B_RABIT (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Oryctolagus cuniculus GN=PPP1CB PE=1 SV=3)

HSP 1 Score: 311.997 bits (798), Expect = 9.216e-89
Identity = 138/168 (82.14%), Postives = 155/168 (92.26%), Query Frame = 2 
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVD 508
            ++YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN++LWK FTDCFNCLP+AA++DEKI C HGGLSPDL  ++Q+R + RPT VPDTGLLCDLLWSDP +DV+GWG NDRGVS+TFG D VS+FL RHDLDL+CRAHQVV+
Sbjct:   84 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVE 251

HSP 2 Score: 36.965 bits (84), Expect = 9.216e-89
Identity = 17/23 (73.91%), Postives = 18/23 (78.26%), Query Frame = 3 
Query:  603 CDLF*VVEDGYEFFADRQLVTIF 671
            C    VVEDGYEFFA RQLVT+F
Sbjct:  244 CRAHQVVEDGYEFFAKRQLVTLF 266
[Close]
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP1B_PONAB (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Pongo abelii GN=PPP1CB PE=2 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 9.216e-89
Identity = 138/168 (82.14%), Postives = 155/168 (92.26%), Query Frame = 2 
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVD 508
            ++YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN++LWK FTDCFNCLP+AA++DEKI C HGGLSPDL  ++Q+R + RPT VPDTGLLCDLLWSDP +DV+GWG NDRGVS+TFG D VS+FL RHDLDL+CRAHQVV+
Sbjct:   84 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVE 251

HSP 2 Score: 36.965 bits (84), Expect = 9.216e-89
Identity = 17/23 (73.91%), Postives = 18/23 (78.26%), Query Frame = 3 
Query:  603 CDLF*VVEDGYEFFADRQLVTIF 671
            C    VVEDGYEFFA RQLVT+F
Sbjct:  244 CRAHQVVEDGYEFFAKRQLVTLF 266
[Close]
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP1B_PIG (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Sus scrofa GN=PPP1CB PE=1 SV=3)

HSP 1 Score: 311.997 bits (798), Expect = 9.216e-89
Identity = 138/168 (82.14%), Postives = 155/168 (92.26%), Query Frame = 2 
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVD 508
            ++YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN++LWK FTDCFNCLP+AA++DEKI C HGGLSPDL  ++Q+R + RPT VPDTGLLCDLLWSDP +DV+GWG NDRGVS+TFG D VS+FL RHDLDL+CRAHQVV+
Sbjct:   84 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVE 251

HSP 2 Score: 36.965 bits (84), Expect = 9.216e-89
Identity = 17/23 (73.91%), Postives = 18/23 (78.26%), Query Frame = 3 
Query:  603 CDLF*VVEDGYEFFADRQLVTIF 671
            C    VVEDGYEFFA RQLVT+F
Sbjct:  244 CRAHQVVEDGYEFFAKRQLVTLF 266
[Close]
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP1B_MOUSE (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Mus musculus GN=Ppp1cb PE=1 SV=3)

HSP 1 Score: 311.997 bits (798), Expect = 9.216e-89
Identity = 138/168 (82.14%), Postives = 155/168 (92.26%), Query Frame = 2 
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVD 508
            ++YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN++LWK FTDCFNCLP+AA++DEKI C HGGLSPDL  ++Q+R + RPT VPDTGLLCDLLWSDP +DV+GWG NDRGVS+TFG D VS+FL RHDLDL+CRAHQVV+
Sbjct:   84 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVE 251

HSP 2 Score: 36.965 bits (84), Expect = 9.216e-89
Identity = 17/23 (73.91%), Postives = 18/23 (78.26%), Query Frame = 3 
Query:  603 CDLF*VVEDGYEFFADRQLVTIF 671
            C    VVEDGYEFFA RQLVT+F
Sbjct:  244 CRAHQVVEDGYEFFAKRQLVTLF 266
[Close]
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP1B_HUMAN (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Homo sapiens GN=PPP1CB PE=1 SV=3)

HSP 1 Score: 311.997 bits (798), Expect = 9.216e-89
Identity = 138/168 (82.14%), Postives = 155/168 (92.26%), Query Frame = 2 
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVVD 508
            ++YLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFN++LWK FTDCFNCLP+AA++DEKI C HGGLSPDL  ++Q+R + RPT VPDTGLLCDLLWSDP +DV+GWG NDRGVS+TFG D VS+FL RHDLDL+CRAHQVV+
Sbjct:   84 ANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVE 251

HSP 2 Score: 36.965 bits (84), Expect = 9.216e-89
Identity = 17/23 (73.91%), Postives = 18/23 (78.26%), Query Frame = 3 
Query:  603 CDLF*VVEDGYEFFADRQLVTIF 671
            C    VVEDGYEFFA RQLVT+F
Sbjct:  244 CRAHQVVEDGYEFFAKRQLVTLF 266
The following BLAST results are available for this feature:
BLAST of CX290133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
GLC7A_CAEEL7.065e-8982.14Serine/threonine-protein phosphatase PP1-alpha OS=... [more]
GLC7A_CAEBR7.065e-8982.14Serine/threonine-protein phosphatase PP1-alpha OS=... [more]
PP1B_XENTR9.216e-8982.14Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_XENLA9.216e-8982.14Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_RAT9.216e-8982.14Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_RABIT9.216e-8982.14Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_PONAB9.216e-8982.14Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_PIG9.216e-8982.14Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_MOUSE9.216e-8982.14Serine/threonine-protein phosphatase PP1-beta cata... [more]
PP1B_HUMAN9.216e-8982.14Serine/threonine-protein phosphatase PP1-beta cata... [more]

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Properties
Property NameValue
Genbank descriptionC02020G12SK IF1 Citrus clementina cDNA clone C02020G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290133 ID=CX290133; Name=CX290133; organism=Citrus clementina; type=EST; length=673bp
CTAAAGCCATTATTTGTTTTTAGGGGACTATGTTGATCGTGGGAAGCAGA
GTTTGGAAACAATATGCCTTTTGCTTGCCTATAAGATTAAGTATCCGGAG
AACTTTTTTCTTTTACGAGGAAATCATGAATGTGCTTCTATTAATCGGAT
TTATGGATTTTATGATGAGTGCAAGCGACGGTTTAATGTGAGGCTTTGGA
AAGCCTTTACTGATTGTTTCAACTGCCTTCCTGTGGCGGCTCTTATAGAT
GAAAAGATATTGTGCATGCATGGCGGTCTTTCCCCTGATCTCTCACACTT
GGATCAAGTTAGAAATCTACCTCGTCCAACTGCTGTTCCCGACACTGGTT
TGCTCTGTGATTTGCTGTGGTCGGACCCTGGTAGAGATGTCAAGGGATGG
GGAATGAATGACAGAGGAGTTTCATACACATTTGGTCCTGACAAGGTGTC
GGAATTCTTAAAAAGGCATGATTTGGACCTTGTCTGCCGTGCCCATCAGG
TGGTCGACTTTCCTACTCTTTCTTTTTCCATTTTTTTCCTTTTCTTTTGG
TACCGGAGGGCCGGTAAAAATGTTCCGTTAGCTCTTGCAACTTCAATCAT
GATGTGATTTGTTCTAGGTTGTGGAGGATGGGTATGAGTTCTTTGCTGAT
AGGCAACTTGTTACCATATTCTC
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