CX290133

Overview
NameCX290133
Unique NameCX290133
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length673
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP2AB_RAT (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Rattus norvegicus GN=Ppp2cb PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.068e-48
Identity = 91/168 (54.17%), Postives = 117/168 (69.64%), Query Frame = 2 
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVV 505
            ++YLF+GDYVDRG  S+ET+ LL+A K++YPE   +LRGNHE   I ++YGFYDEC R++ N  +WK FTD F+ LP+ AL+D +I C+HGGLSP +  LD +R L R   VP  G +CDLLWSDP  D  GWG++ RG  YTFG D    F   + L LV RAHQ+V
Sbjct:   78 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLV 244

HSP 2 Score: 22.3274 bits (46), Expect = 2.068e-48
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 3 
Query:  618 VVEDGYEFFADRQLVTIF 671
            +V +GY +  DR +VTIF
Sbjct:  243 LVMEGYNWCHDRNVVTIF 260
[Close]
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP2AB_RABIT (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Oryctolagus cuniculus GN=PPP2CB PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.068e-48
Identity = 91/168 (54.17%), Postives = 117/168 (69.64%), Query Frame = 2 
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVV 505
            ++YLF+GDYVDRG  S+ET+ LL+A K++YPE   +LRGNHE   I ++YGFYDEC R++ N  +WK FTD F+ LP+ AL+D +I C+HGGLSP +  LD +R L R   VP  G +CDLLWSDP  D  GWG++ RG  YTFG D    F   + L LV RAHQ+V
Sbjct:   78 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLV 244

HSP 2 Score: 22.3274 bits (46), Expect = 2.068e-48
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 3 
Query:  618 VVEDGYEFFADRQLVTIF 671
            +V +GY +  DR +VTIF
Sbjct:  243 LVMEGYNWCHDRNVVTIF 260
[Close]
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP2AB_MOUSE (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Mus musculus GN=Ppp2cb PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.068e-48
Identity = 91/168 (54.17%), Postives = 117/168 (69.64%), Query Frame = 2 
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVV 505
            ++YLF+GDYVDRG  S+ET+ LL+A K++YPE   +LRGNHE   I ++YGFYDEC R++ N  +WK FTD F+ LP+ AL+D +I C+HGGLSP +  LD +R L R   VP  G +CDLLWSDP  D  GWG++ RG  YTFG D    F   + L LV RAHQ+V
Sbjct:   78 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLV 244

HSP 2 Score: 22.3274 bits (46), Expect = 2.068e-48
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 3 
Query:  618 VVEDGYEFFADRQLVTIF 671
            +V +GY +  DR +VTIF
Sbjct:  243 LVMEGYNWCHDRNVVTIF 260
[Close]
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP2AB_HUMAN (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Homo sapiens GN=PPP2CB PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.068e-48
Identity = 91/168 (54.17%), Postives = 117/168 (69.64%), Query Frame = 2 
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVV 505
            ++YLF+GDYVDRG  S+ET+ LL+A K++YPE   +LRGNHE   I ++YGFYDEC R++ N  +WK FTD F+ LP+ AL+D +I C+HGGLSP +  LD +R L R   VP  G +CDLLWSDP  D  GWG++ RG  YTFG D    F   + L LV RAHQ+V
Sbjct:   78 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLV 244

HSP 2 Score: 22.3274 bits (46), Expect = 2.068e-48
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 3 
Query:  618 VVEDGYEFFADRQLVTIF 671
            +V +GY +  DR +VTIF
Sbjct:  243 LVMEGYNWCHDRNVVTIF 260
[Close]
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP2AB_BOVIN (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Bos taurus GN=PPP2CB PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.068e-48
Identity = 91/168 (54.17%), Postives = 117/168 (69.64%), Query Frame = 2 
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVV 505
            ++YLF+GDYVDRG  S+ET+ LL+A K++YPE   +LRGNHE   I ++YGFYDEC R++ N  +WK FTD F+ LP+ AL+D +I C+HGGLSP +  LD +R L R   VP  G +CDLLWSDP  D  GWG++ RG  YTFG D    F   + L LV RAHQ+V
Sbjct:   78 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLV 244

HSP 2 Score: 22.3274 bits (46), Expect = 2.068e-48
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 3 
Query:  618 VVEDGYEFFADRQLVTIF 671
            +V +GY +  DR +VTIF
Sbjct:  243 LVMEGYNWCHDRNVVTIF 260
[Close]
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP2AA_CHICK (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Gallus gallus GN=PPP2CA PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.068e-48
Identity = 91/168 (54.17%), Postives = 117/168 (69.64%), Query Frame = 2 
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVV 505
            ++YLF+GDYVDRG  S+ET+ LL+A K++YPE   +LRGNHE   I ++YGFYDEC R++ N  +WK FTD F+ LP+ AL+D +I C+HGGLSP +  LD +R L R   VP  G +CDLLWSDP  D  GWG++ RG  YTFG D    F   + L LV RAHQ+V
Sbjct:   78 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLV 244

HSP 2 Score: 22.3274 bits (46), Expect = 2.068e-48
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 3 
Query:  618 VVEDGYEFFADRQLVTIF 671
            +V +GY +  DR +VTIF
Sbjct:  243 LVMEGYNWCHDRNVVTIF 260
[Close]
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP2AB_PIG (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform (Fragment) OS=Sus scrofa GN=PPP2CB PE=2 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 2.069e-48
Identity = 91/168 (54.17%), Postives = 117/168 (69.64%), Query Frame = 2 
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVV 505
            ++YLF+GDYVDRG  S+ET+ LL+A K++YPE   +LRGNHE   I ++YGFYDEC R++ N  +WK FTD F+ LP+ AL+D +I C+HGGLSP +  LD +R L R   VP  G +CDLLWSDP  D  GWG++ RG  YTFG D    F   + L LV RAHQ+V
Sbjct:   62 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPERITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVDGQIFCLHGGLSPSIDTLDHIRALDRLQEVPHEGPMCDLLWSDPD-DRGGWGISPRGAGYTFGQDISETFNHANGLTLVSRAHQLV 228

HSP 2 Score: 22.3274 bits (46), Expect = 2.069e-48
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 3 
Query:  618 VVEDGYEFFADRQLVTIF 671
            +V +GY +  DR +VTIF
Sbjct:  227 LVMEGYNWCHDRNVVTIF 244
[Close]
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP4C_XENTR (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Xenopus tropicalis GN=ppp4c PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.103e-48
Identity = 86/168 (51.19%), Postives = 122/168 (72.62%), Query Frame = 2 
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVV 505
            ++YLF+GD+VDRG  S+ET  LLLA K++YP+   L+RGNHE   I ++YGFYDEC R++ +V +W+  T+ F+ L ++A+ID KI C+HGGLSP +  LDQ+R + R   VP  G +CDLLWSDP  D  GWG++ RG  Y FG D V++F   +++D++CRAHQ+V
Sbjct:   75 TNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDP-EDTTGWGVSPRGAGYLFGSDVVAQFNAANNIDMICRAHQLV 241
[Close]
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP4C_XENLA (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Xenopus laevis GN=ppp4c PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.103e-48
Identity = 86/168 (51.19%), Postives = 122/168 (72.62%), Query Frame = 2 
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVV 505
            ++YLF+GD+VDRG  S+ET  LLLA K++YP+   L+RGNHE   I ++YGFYDEC R++ +V +W+  T+ F+ L ++A+ID KI C+HGGLSP +  LDQ+R + R   VP  G +CDLLWSDP  D  GWG++ RG  Y FG D V++F   +++D++CRAHQ+V
Sbjct:   75 TNYLFMGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVTVWRYCTEIFDYLSLSAIIDGKIFCVHGGLSPSIQTLDQIRTIDRKQEVPHDGPMCDLLWSDP-EDTTGWGVSPRGAGYLFGSDVVAQFNAANNIDMICRAHQLV 241
[Close]
BLAST of CX290133 vs. ExPASy Swiss-Prot
Match: PP4C1_CAEBR (Serine/threonine-protein phosphatase 4 catalytic subunit 1 OS=Caenorhabditis briggsae GN=pph-4.1 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.103e-48
Identity = 87/168 (51.79%), Postives = 117/168 (69.64%), Query Frame = 2 
Query:    5 SHYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF-NVRLWKAFTDCFNCLPVAALIDEKILCMHGGLSPDLSHLDQVRNLPRPTAVPDTGLLCDLLWSDPGRDVKGWGMNDRGVSYTFGPDKVSEFLKRHDLDLVCRAHQVV 505
            ++YLFLGD+VDRG  S+ET  LLLA K +YP+   L+RGNHE   I ++YGFYDEC R++ N  +WK  T+ F+ L +AA+ID K+ C+HGGLSP +S +DQ+R + R   VP  G +CDLLWSDP     GWG++ RG  Y FG D    F + + +DL+CRAHQ+V
Sbjct:  100 TNYLFLGDFVDRGFYSVETFLLLLALKARYPDRMMLIRGNHESRQITQVYGFYDECMRKYGNASVWKHCTEVFDYLALAAVIDGKVFCVHGGLSPSISTMDQIRVIDRKQEVPHDGPMCDLLWSDPEEGNVGWGLSPRGAGYLFGADASKTFCEANSVDLICRAHQLV 267
The following BLAST results are available for this feature:
BLAST of CX290133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 198
Match NameE-valueIdentityDescription
PP2AB_RAT2.068e-4854.17Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_RABIT2.068e-4854.17Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_MOUSE2.068e-4854.17Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_HUMAN2.068e-4854.17Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_BOVIN2.068e-4854.17Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_CHICK2.068e-4854.17Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_PIG2.069e-4854.17Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP4C_XENTR2.103e-4851.19Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C_XENLA2.103e-4851.19Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP4C1_CAEBR2.103e-4851.79Serine/threonine-protein phosphatase 4 catalytic s... [more]

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Properties
Property NameValue
Genbank descriptionC02020G12SK IF1 Citrus clementina cDNA clone C02020G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290133 ID=CX290133; Name=CX290133; organism=Citrus clementina; type=EST; length=673bp
CTAAAGCCATTATTTGTTTTTAGGGGACTATGTTGATCGTGGGAAGCAGA
GTTTGGAAACAATATGCCTTTTGCTTGCCTATAAGATTAAGTATCCGGAG
AACTTTTTTCTTTTACGAGGAAATCATGAATGTGCTTCTATTAATCGGAT
TTATGGATTTTATGATGAGTGCAAGCGACGGTTTAATGTGAGGCTTTGGA
AAGCCTTTACTGATTGTTTCAACTGCCTTCCTGTGGCGGCTCTTATAGAT
GAAAAGATATTGTGCATGCATGGCGGTCTTTCCCCTGATCTCTCACACTT
GGATCAAGTTAGAAATCTACCTCGTCCAACTGCTGTTCCCGACACTGGTT
TGCTCTGTGATTTGCTGTGGTCGGACCCTGGTAGAGATGTCAAGGGATGG
GGAATGAATGACAGAGGAGTTTCATACACATTTGGTCCTGACAAGGTGTC
GGAATTCTTAAAAAGGCATGATTTGGACCTTGTCTGCCGTGCCCATCAGG
TGGTCGACTTTCCTACTCTTTCTTTTTCCATTTTTTTCCTTTTCTTTTGG
TACCGGAGGGCCGGTAAAAATGTTCCGTTAGCTCTTGCAACTTCAATCAT
GATGTGATTTGTTCTAGGTTGTGGAGGATGGGTATGAGTTCTTTGCTGAT
AGGCAACTTGTTACCATATTCTC
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