CX290136
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290136 vs. ExPASy Swiss-Prot
Match: YAB3_ARATH (Axial regulator YABBY 3 OS=Arabidopsis thaliana GN=YAB3 PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 1.546e-37 Identity = 89/177 (50.28%), Postives = 105/177 (59.32%), Query Frame = 3 Query: 51 EQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSL-SWQDVHHHQAPSYASP------------------ECRIDLGSSSKCNNKISAMRTPTNKATEERV-------VNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 503 +QLCY+ C+FC+ VLAVSVP SSL VTVRCGHCSNL SV ++ L S ++ H P P + +S+ N+ M T ++ + NRPPEKRQRVPSAYN+FIKEEIQRIKA NPDISHREAFS AAKNWAHFPHIHF Sbjct: 23 DQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLPSVSNLGHSFLPPPPPPPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDHLQEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHF 199
BLAST of CX290136 vs. ExPASy Swiss-Prot
Match: YAB1_ORYSJ (Protein YABBY 1 OS=Oryza sativa subsp. japonica GN=YAB1 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 8.484e-36 Identity = 74/156 (47.44%), Postives = 99/156 (63.46%), Query Frame = 3 Query: 36 IDVAPEQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSLSWQDVHHHQAPSYASPECRIDLGSSSKCNNKISAMRTPTNKATEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 503 + E +CY+ CN+CN +L V+VP + +IVTVRCGHC+ + S+++A Q+ + QD HQ + + N + S P + ++ RPPEKRQRVPSAYN+FIKEEIQRIK +NP+ISHREAFS AAKNWAH P +HF Sbjct: 3 VQFTSEHVCYVNCNYCNTILVVNVPNNCSYNIVTVRCGHCTMVLSMDLAPFHQARTVQD---HQVQNRGFQGNNFGSYDIASRNQRTSTAMYPMPTSQQQVSPIRPPEKRQRVPSAYNRFIKEEIQRIKTSNPEISHREAFSAAAKNWAHLPRLHF 155
BLAST of CX290136 vs. ExPASy Swiss-Prot
Match: YAB4_ARATH (Axial regulator YABBY 4 OS=Arabidopsis thaliana GN=YAB4 PE=1 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 7.432e-32 Identity = 75/163 (46.01%), Postives = 100/163 (61.35%), Query Frame = 3 Query: 48 PEQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNMAAA-------FQSLSWQD-VHHHQAPSYASPECRIDLGSSSKCNNKISAMRTPTNKATEE----RVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIH 500 P Q+C++ C FC +L VSVP +SL +VTVRCGHC++L SVN+ A SLS D + + E + K N+ + + + N+ + +VVN+PPEKRQR PSAYN FIKEEI+R+KA NP ++H+EAFS AAKNWAHFP H Sbjct: 18 PGQICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVNLMKASFIPLHLLASLSHLDETGKEEVAATDGVEEEAWKVNQEKENSPTTLVSSSDNEDEDVSRVYQVVNKPPEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFPPAH 180
BLAST of CX290136 vs. ExPASy Swiss-Prot
Match: YABDL_ORYSJ (Protein DROOPING LEAF OS=Oryza sativa subsp. japonica GN=DL PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 2.024e-29 Identity = 72/149 (48.32%), Postives = 91/149 (61.07%), Query Frame = 3 Query: 51 EQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNMAAAF-QSLSWQDVHHHQAPSYASP--ECRIDLGSSSKCNNKISAMRTPTNKATEERV--VNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWA 482 E LCY+ C +CN VLAV VPC L+D VTV+CGHC+NL ++ Q LS D H + P +CR N+ + +PT+ R V +PPEK+ R+PSAYN+F++EEIQRIKA PDI HREAFS AAKNWA Sbjct: 8 EHLCYVRCTYCNTVLAVGVPCKRLMDTVTVKCGHCNNLSFLSPRPPMVQPLSPTD---HPLGPFQGPCTDCR---------RNQPLPLVSPTSNEGSPRAPFVVKPPEKKHRLPSAYNRFMREEIQRIKAAKPDIPHREAFSMAAKNWA 144
BLAST of CX290136 vs. ExPASy Swiss-Prot
Match: CRC_ARATH (Protein CRABS CLAW OS=Arabidopsis thaliana GN=CRC PE=1 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 3.231e-27 Identity = 64/146 (43.84%), Postives = 90/146 (61.64%), Query Frame = 3 Query: 51 EQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSLSWQDVHHHQAPSYASPECRIDLGSSSKCNNKISAMRTPTNKATEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHF 488 E L Y+ C+ CN +LAV +P +LD VTV+CGHC NL + Q + Q S+ + + GSSS ++ S+ + P+ V +PPEK+QR+PSAYN+F+++EIQRIK+ NP+I HREAFS AAKNWA + Sbjct: 19 EHLYYVRCSICNTILAVGIPLKRMLDTVTVKCGHCGNLSFLTTTPPLQGHVSLTL---QMQSFGGSDYK--KGSSSSSSSSTSSDQPPSPSPP---FVVKPPEKKQRLPSAYNRFMRDEIQRIKSANPEIPHREAFSAAAKNWAKY 156
BLAST of CX290136 vs. ExPASy Swiss-Prot
Match: YAB7_ORYSJ (Protein YABBY 7 OS=Oryza sativa subsp. japonica GN=YAB7 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 5.512e-27 Identity = 70/154 (45.45%), Postives = 93/154 (60.39%), Query Frame = 3 Query: 51 EQLCYIPCNFCNIVLAVSVPCSSLLDIVTVRCGHCSNLWS-VNM----AAAFQSLSWQDVHHHQAPSYASPECRIDLGSSSKCNNKISAMRTPTNKATEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHI 497 E+L + C+FC VL VSVPCSS+L +V V+CGHCS + S VN+ +A L+ Q++ P S E D + A P A V N+PP ++QR PSAYN F+KEEI+RIK+ P+I+H++AFSTAAKNWAH P I Sbjct: 14 ERLGCVQCSFCATVLLVSVPCSSVLRVVAVQCGHCSGILSAVNLPPSPVSASIELTPQELDAGPPPGEYSDESSGDDREGRDAEDDAPA---PAAAA----VANKPPGRKQRTPSAYNCFVKEEIKRIKSMEPNITHKQAFSTAAKNWAHLPRI 160 The following BLAST results are available for this feature:
BLAST of CX290136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290136 ID=CX290136; Name=CX290136; organism=Citrus clementina; type=EST; length=504bpback to top |