CX290139
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290139 vs. ExPASy Swiss-Prot
Match: EF1A_THEON (Elongation factor 1-alpha OS=Thermococcus onnurineus (strain NA1) GN=tuf PE=3 SV=1) HSP 1 Score: 278.485 bits (711), Expect = 2.522e-74 Identity = 131/245 (53.47%), Postives = 178/245 (72.65%), Query Frame = 1 Query: 10 PFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG------LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDP--AREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGV 720 P +PIS +EGDN++++S + WY GPTL++ALD I EP +P+DKPLR+P+QDVY I G+GTVPVGRVETGVL+ G VV F P+ + EVKS+EMHHE +QEALPGDN+GFNV+ V D+KRG VA ++ + P R F +Q+I++NHP I GY PVL HT +AV+F +L+ K+D R+G +E+ P+F+K GD+ +V + PTKPMV+E + P +GRFA+RDM QTVA G+ Sbjct: 176 PIIPISAWEGDNVVKKSDKMPWYNGPTLIEALDQIPEPPKPTDKPLRIPIQDVYSIKGVGTVPVGRVETGVLRVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPMQEALPGDNIGFNVRGVGKNDIKRGDVAGHTNNPPTVVRPKDTFKAQIIVLNHPTAITIGYTPVLHAHTLQVAVRFEQLLAKLDPRTGNVVEENPQFIKTGDSAIVVLRPTKPMVIEPVKEIPQMGRFAIRDMGQTVAAGM 420
BLAST of CX290139 vs. ExPASy Swiss-Prot
Match: EF1A_METJA (Elongation factor 1-alpha OS=Methanocaldococcus jannaschii GN=tuf PE=3 SV=1) HSP 1 Score: 277.33 bits (708), Expect = 5.619e-74 Identity = 125/236 (52.97%), Postives = 176/236 (74.58%), Query Frame = 1 Query: 13 FVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGV 720 F+P + +GDN+++RS N+ WYKGPTL++ALD P++P++ PLR+P+QDVY I G+GTVPVGRVETG+L+PG V F P+G++ EVKS+EMHHE + +A PGDN+GFNV+ V+ KD+KRG V + D+P A FT+Q++++ HP I GY PV HT+ +A F EL+ K+D R+G+ +E+ P+FLK GDA +VK+ PTKPMV+E + P LGRFA+RDM T+A G+ Sbjct: 185 FIPTASLKGDNVVKRSENMPWYKGPTLVEALDKFQPPEKPTNLPLRIPIQDVYSITGVGTVPVGRVETGILRPGDKVVFEPAGVSGEVKSIEMHHEQIPQAEPGDNIGFNVRGVSKKDIKRGDVCGH-PDNPPTVAEEFTAQIVVLQHPTAITVGYTPVFHAHTAQVACTFIELLKKLDPRTGQVIEENPQFLKTGDAAIVKIKPTKPMVIENVREIPQLGRFAIRDMGMTIAAGM 419
BLAST of CX290139 vs. ExPASy Swiss-Prot
Match: EF1A_THECE (Elongation factor 1-alpha OS=Thermococcus celer GN=tuf PE=3 SV=1) HSP 1 Score: 276.944 bits (707), Expect = 7.339e-74 Identity = 130/245 (53.06%), Postives = 178/245 (72.65%), Query Frame = 1 Query: 10 PFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG------LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDP--AREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGV 720 P +PIS +EGDN++++S + WY GPTL++ALD + EP +P+DKPLR+P+QDVY I G+GTVPVGRVETGVL+ G VV F P+ + EVKS+EMHHE +QEALPGDN+GFNV+ V D+KRG VA ++ + P R F +Q+I++NHP I GY PVL HT +AV+F +L+ K+D R+G +E+ P+F+K GD+ +V + PTKPMV+E + P +GRFA+RDM QTVA G+ Sbjct: 176 PIIPISAWEGDNVVKKSDKMPWYNGPTLIEALDQMPEPPKPTDKPLRIPIQDVYSIKGVGTVPVGRVETGVLRVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPMQEALPGDNIGFNVRGVGKNDIKRGDVAGHTNNPPTVVRPKDTFKAQIIVLNHPTAITVGYTPVLHAHTLQVAVRFEQLLAKLDPRTGNIVEENPQFIKTGDSAIVVLRPTKPMVIEPVKEIPQMGRFAIRDMGQTVAAGM 420
BLAST of CX290139 vs. ExPASy Swiss-Prot
Match: EF1A_METLZ (Elongation factor 1-alpha OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=tuf PE=3 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 9.585e-74 Identity = 135/240 (56.25%), Postives = 168/240 (70.00%), Query Frame = 1 Query: 1 ARGPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGV 720 A PF+PIS F GDN+ E S N WYKGPTLL ALD P P+DKPLRLP+QDVY I G+GTVPVGRVETG+LK G ++F P+ +T EVKS+EMHHE EALPGDNVGFNV+ +A D++RG V ++P A FT+QV+++ HP + GY PV CHTS A F+EL K+D RSG+ E+ P FLK GDA + + PT+P+V+ET + P LGRFAVRDM TVA G+ Sbjct: 177 AETPFIPISAFCGDNIKEASANTPWYKGPTLLAALDLFKMPDMPTDKPLRLPIQDVYTISGVGTVPVGRVETGILKKGQKISFMPANVTGEVKSIEMHHEEFPEALPGDNVGFNVRGIAKNDVRRGDVC-GPIENPPTVAEEFTAQVVVLQHPSVLSVGYTPVFHCHTSQTACMFTELNKKLDPRSGQVKEENPAFLKAGDAAICTITPTRPLVIETAKELPQLGRFAVRDMGMTVAAGL 415
BLAST of CX290139 vs. ExPASy Swiss-Prot
Match: EF1A_METTH (Elongation factor 1-alpha OS=Methanobacterium thermoautotrophicum GN=tuf PE=3 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.252e-73 Identity = 128/236 (54.24%), Postives = 175/236 (74.15%), Query Frame = 1 Query: 13 FVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGV 720 F+P+S FEGDN+ +S N WYKG TL++ALD++ P++P D PLR+P+QDVY I G+GTVPVGRVETGVLK G V F P+G++ EVKS+EMHHE +++A PGDN+GFNV+ V D++RG VA + D+P + A FT+Q++++ HPG I GY PV CHT+ +A F ELV K++ +G+ E+ P FLK G+A +VK+ PTKP+V+E D P +GRFA+RDM QTVA G+ Sbjct: 171 FIPLSAFEGDNITSKSENTPWYKGKTLVEALDDLEAPEKPVDLPLRIPIQDVYSITGVGTVPVGRVETGVLKKGENVIFEPAGVSGEVKSIEMHHEMIEQAEPGDNIGFNVRGVGKNDIRRGDVAGH-LDNPPKVAKEFTAQIVVLQHPGVITVGYTPVFHCHTAQVACTFLELVQKMNPATGQVEEENPDFLKTGNAAVVKVKPTKPLVIEKIKDIPHMGRFAIRDMGQTVAAGM 405
BLAST of CX290139 vs. ExPASy Swiss-Prot
Match: EF1A_METKA (Elongation factor 1-alpha OS=Methanopyrus kandleri GN=tuf PE=3 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.252e-73 Identity = 134/247 (54.25%), Postives = 174/247 (70.45%), Query Frame = 1 Query: 10 PFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTT-------EVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAA---NFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGV 720 PF+PIS FEGDN++E+S N WY GPTLL+ALDN+ P++P+DKPLR+P+QDVY I G+GTVPVGRVETGVL+ G V F P+ T EV+S+EMHHE ++ A PGDN+GFNVK V D+ RG VA + D+PA F +Q++++ HP I GY PV CHT+ +A KF EL+ KID +G+ +E+ P FLK G+A V++ PTKPMV+E S P LGRFA+RDM QTVA G+ Sbjct: 170 PFIPISAFEGDNVVEKSDNTPWYDGPTLLEALDNLEPPEKPTDKPLRIPIQDVYSITGVGTVPVGRVETGVLEVGDTVRFEPAYTATGGRKGEGEVRSIEMHHEEIERAEPGDNIGFNVKGVGKNDISRGDVACH-PDEPATVVTPDDTFIAQIVVLQHPSAITAGYTPVFHCHTAQVACKFEELIEKIDPATGEVIEENPDFLKTGEAAKVRIRPTKPMVIEEVSFIPQLGRFAIRDMGQTVAAGM 415
BLAST of CX290139 vs. ExPASy Swiss-Prot
Match: EF1A_DESMO (Elongation factor 1-alpha OS=Desulfurococcus mobilis GN=tuf PE=3 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 1.252e-73 Identity = 130/236 (55.08%), Postives = 173/236 (73.31%), Query Frame = 1 Query: 10 PFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG 717 PF+PIS + G+N+IERS N+ WY GPTL++ALD + P +P +KPLR+P+QDVY I GIG VPVGRVETGVLK G + F P+GL EVK++E HH +++A PGDN+GFNVK V KD+KRG VA S D P A FT+++++M HP I GY PV+ HT+ +A + +E++ KID R+GKE+EK P FLK GD +VK P KP+VVE +SD+ LGRFA+RDM +T+ +G Sbjct: 190 PFIPISAWTGENLIERSPNMPWYNGPTLVEALDTLEVPPKPINKPLRIPIQDVYNISGIGVVPVGRVETGVLKVGDKLVFMPAGLVAEVKTIETHHTKIEKAEPGDNIGFNVKGVEKKDIKRGDVA-GSLDVPPTVADEFTARIMVMWHPTAIAVGYTPVIHVHTASVACRITEIIAKIDPRTGKEIEKNPHFLKQGDIAIVKFKPIKPLVVEKYSDFQGLGRFAMRDMGKTIGIG 424
BLAST of CX290139 vs. ExPASy Swiss-Prot
Match: EF1A_HYPBU (Elongation factor 1-alpha OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=tuf PE=3 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 1.635e-73 Identity = 128/238 (53.78%), Postives = 178/238 (74.79%), Query Frame = 1 Query: 10 PFVPISGFEGDNMIERSTNLDWYKGPTLLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGV 720 PF+P+S + G+N+IERS N+ WY GPTL++ALD I PK+P DKPLR+P+Q+VY I G+GTVPVGRVETGVLK G V F P G+ EV+S+EMHH+ LQ+A PGDN+GFNV+ ++ KD++RG VA + D P A FT+++ ++ HP I GY PV+ HT+ IA + +E+ K+D R+G+ +EK P+FLK GDA +VK P KPMV+E +S++P LGRFA+RDM +T+ +G+ Sbjct: 189 PFIPVSAWTGENLIERSPNMPWYNGPTLVEALDTYIQPPKKPVDKPLRIPIQNVYSIPGVGTVPVGRVETGVLKVGDKVVFMPPGVVGEVRSIEMHHQPLQQAEPGDNIGFNVRGISKKDIRRGDVAGH-VDKPPTVAEEFTARIFVIWHPSAITVGYTPVIHAHTASIAARITEIQAKLDPRTGQVIEKNPQFLKAGDAAIVKFKPIKPMVIEKYSEFPQLGRFAMRDMGKTIGIGI 425
BLAST of CX290139 vs. ExPASy Swiss-Prot
Match: EF1A_THEGJ (Elongation factor 1-alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=tuf PE=3 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 3.642e-73 Identity = 131/245 (53.47%), Postives = 177/245 (72.24%), Query Frame = 1 Query: 10 PFVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG------LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDP--AREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGV 720 P +PIS +EGDN++++S + WYKGPTL++ALD I EP +P DKPLR+P+QDVY I G+GTVPVGRVETGVL+ G VV F P+ + EVKS+EMHHE LQEA PGDN+GFNV+ V D+KRG VA ++ + P R F +Q+I++NHP I GY PVL HT+ +AV+F +L+ K+D R+G +E+ P+F+K GD+ +V + PTK MV+E + P +GRFA+RDM QTVA G+ Sbjct: 176 PVIPISAWEGDNVVKKSDKMPWYKGPTLIEALDQIPEPPKPIDKPLRIPIQDVYSIKGVGTVPVGRVETGVLRVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPLQEAYPGDNIGFNVRGVGKNDIKRGDVAGHTTNPPTVVRPKDTFKAQIIVLNHPTAITVGYTPVLHAHTTQVAVRFEQLLAKLDPRTGNIVEENPQFIKTGDSAIVILRPTKAMVIEPVKEIPQMGRFAIRDMGQTVAAGM 420
BLAST of CX290139 vs. ExPASy Swiss-Prot
Match: EF1AS_PORPU (Elongation factor 1-alpha S OS=Porphyra purpurea GN=TEF-S PE=2 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 3.642e-73 Identity = 147/256 (57.42%), Postives = 183/256 (71.48%), Query Frame = 1 Query: 13 FVPISGFEGDNMIERSTNLDWYKGPTLLDALDNINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSG-LTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKEL-------------EKEPK------FLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGV 720 FVPISG+ GDNM+E+STN+ WY GPTL + LD + PKRP++ PLRLPLQDVYKIGGIGTVPVGRVETG+LK GM VTF P+G EVKSVEMHH ++ +A+PGDNVGFNVK + VKD+KRG V ++K+DP F + VII +H I NGY PVLDCHT+HIA KF+ +++K D+R GK+ + EP+ K G++ V + PTK MVVE +S Y PLGRFAVRDM++TVAVGV Sbjct: 218 FVPISGWTGDNMLEKSTNMPWYTGPTLFEVLDAMKPPKRPTEDPLRLPLQDVYKIGGIGTVPVGRVETGILKAGMQVTFEPAGKAAVEVKSVEMHHTSVPQAIPGDNVGFNVK-LTVKDIKRGDVCGDTKNDPPIPTECFLANVIIQDHK-NIRNGYTPVLDCHTAHIACKFASILSKKDKR-GKQTHDVSDDTEWATKDDAEPRNNRMNIAAKTGESVNVWLQPTKAMVVEAYSMYSPLGRFAVRDMKKTVAVGV 470 The following BLAST results are available for this feature:
BLAST of CX290139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290139 ID=CX290139; Name=CX290139; organism=Citrus clementina; type=EST; length=721bpback to top |