CX290139
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290139 vs. ExPASy Swiss-Prot
Match: EFTU_SHIBS (Elongation factor Tu OS=Shigella boydii serotype 4 (strain Sb227) GN=tuf1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13 Identity = 63/209 (30.14%), Postives = 101/209 (48.33%), Query Frame = 1 Query: 112 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFSDYPPLGRFAVRDMRQTVAVGV 720 I EP+R DKP LP++DV+ I G GTV GRVE G++K G V G+ KS VEM + L E G+NVG ++ + ++++RG V +K + F S+V I++ G + P + + +++ I+ G E+ + GD +KM+ T P+ ++ RFA+R+ +TV GV Sbjct: 200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGV 388
BLAST of CX290139 vs. ExPASy Swiss-Prot
Match: EFTU_SHESA (Elongation factor Tu OS=Shewanella sp. (strain ANA-3) GN=tuf1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13 Identity = 62/213 (29.11%), Postives = 100/213 (46.95%), Query Frame = 1 Query: 91 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEV--KSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGV 720 L ALD+ I EP+R DKP +P++DV+ I G GTV GRVE G+++ G V TT+ VEM + L E G+N G ++ D++RG V SK F S+V +++ + G + P + + +++ I+ G E+ + GD +K+ P+ ++ RFA+R+ +TV GV Sbjct: 192 LAAALDSYIPEPERDIDKPFLMPIEDVFSISGRGTVVTGRVERGIVRVGDEVEIVGIRATTKTTCTGVEMFRKLLDEGRAGENCGILLRGTKRDDVERGQVL--SKPGSINPHTTFESEVYVLSK--EEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGDNIKMKVTLICPIAMDEGL------RFAIREGGRTVGAGV 388
BLAST of CX290139 vs. ExPASy Swiss-Prot
Match: EFTU_SALTY (Elongation factor Tu OS=Salmonella typhimurium GN=tufA PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13 Identity = 63/209 (30.14%), Postives = 101/209 (48.33%), Query Frame = 1 Query: 112 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFSDYPPLGRFAVRDMRQTVAVGV 720 I EP+R DKP LP++DV+ I G GTV GRVE G++K G V G+ KS VEM + L E G+NVG ++ + ++++RG V +K + F S+V I++ G + P + + +++ I+ G E+ + GD +KM+ T P+ ++ RFA+R+ +TV GV Sbjct: 200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGV 388
BLAST of CX290139 vs. ExPASy Swiss-Prot
Match: EFTU_SALTI (Elongation factor Tu OS=Salmonella typhi GN=tufA PE=3 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13 Identity = 63/209 (30.14%), Postives = 101/209 (48.33%), Query Frame = 1 Query: 112 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFSDYPPLGRFAVRDMRQTVAVGV 720 I EP+R DKP LP++DV+ I G GTV GRVE G++K G V G+ KS VEM + L E G+NVG ++ + ++++RG V +K + F S+V I++ G + P + + +++ I+ G E+ + GD +KM+ T P+ ++ RFA+R+ +TV GV Sbjct: 200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGV 388
BLAST of CX290139 vs. ExPASy Swiss-Prot
Match: EFTU_SALPB (Elongation factor Tu OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=tuf1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13 Identity = 63/209 (30.14%), Postives = 101/209 (48.33%), Query Frame = 1 Query: 112 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFSDYPPLGRFAVRDMRQTVAVGV 720 I EP+R DKP LP++DV+ I G GTV GRVE G++K G V G+ KS VEM + L E G+NVG ++ + ++++RG V +K + F S+V I++ G + P + + +++ I+ G E+ + GD +KM+ T P+ ++ RFA+R+ +TV GV Sbjct: 200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGV 388
BLAST of CX290139 vs. ExPASy Swiss-Prot
Match: EFTU_SALPA (Elongation factor Tu OS=Salmonella paratyphi A GN=tuf1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13 Identity = 63/209 (30.14%), Postives = 101/209 (48.33%), Query Frame = 1 Query: 112 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFSDYPPLGRFAVRDMRQTVAVGV 720 I EP+R DKP LP++DV+ I G GTV GRVE G++K G V G+ KS VEM + L E G+NVG ++ + ++++RG V +K + F S+V I++ G + P + + +++ I+ G E+ + GD +KM+ T P+ ++ RFA+R+ +TV GV Sbjct: 200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGV 388
BLAST of CX290139 vs. ExPASy Swiss-Prot
Match: EFTU_SALCH (Elongation factor Tu OS=Salmonella choleraesuis GN=tuf1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13 Identity = 63/209 (30.14%), Postives = 101/209 (48.33%), Query Frame = 1 Query: 112 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFSDYPPLGRFAVRDMRQTVAVGV 720 I EP+R DKP LP++DV+ I G GTV GRVE G++K G V G+ KS VEM + L E G+NVG ++ + ++++RG V +K + F S+V I++ G + P + + +++ I+ G E+ + GD +KM+ T P+ ++ RFA+R+ +TV GV Sbjct: 200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGV 388
BLAST of CX290139 vs. ExPASy Swiss-Prot
Match: EFTU_SALAR (Elongation factor Tu OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=tuf1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13 Identity = 63/209 (30.14%), Postives = 101/209 (48.33%), Query Frame = 1 Query: 112 INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGLTTEVKS----VEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPT--KPMVVETFSDYPPLGRFAVRDMRQTVAVGV 720 I EP+R DKP LP++DV+ I G GTV GRVE G++K G V G+ KS VEM + L E G+NVG ++ + ++++RG V +K + F S+V I++ G + P + + +++ I+ G E+ + GD +KM+ T P+ ++ RFA+R+ +TV GV Sbjct: 200 IPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGIIKVGEEVEI--VGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVL--AKPGTIKPHTKFESEVYILSK--DEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEM------VMPGD--NIKMVVTLIHPIAMDDGL------RFAIREGGRTVGAGV 388
BLAST of CX290139 vs. ExPASy Swiss-Prot
Match: EFTU_SALAI (Elongation factor Tu OS=Salinispora arenicola (strain CNS-205) GN=tuf PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13 Identity = 58/213 (27.23%), Postives = 101/213 (47.42%), Query Frame = 1 Query: 91 LLDALD-NINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG---MVVTFGPSGLTTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG 717 L+ A+D +I +P+R ++KP +P++DV+ I G GTV GR E G+LKP +V T +EM + L EA G+NVG ++ V +D++RG V K A F + V I++ + G + P + + +++ + G E+ + GD + + +P+ +E +FA+R+ +TV G Sbjct: 194 LMTAVDTSIPQPERETEKPFLMPIEDVFTITGRGTVVTGRAERGILKPNEEVELVGIREKSTKTTCTGIEMFRKLLDEARAGENVGLLLRGVKREDVERGMVV--IKPGTATPHTEFEATVYILSK--EEGGRHTPFFQNYRPQFYFRTTDVTGVVTLPEGTEM------VMPGDNTTMTVKLIQPIAMEENL------KFAIREGGRTVGAG 390
BLAST of CX290139 vs. ExPASy Swiss-Prot
Match: EFTU_RICSI (Elongation factor Tu OS=Rickettsia sibirica GN=tuf PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13 Identity = 58/215 (26.98%), Postives = 107/215 (49.77%), Query Frame = 1 Query: 91 LLDALDN-INEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFGPSGL----TTEVKSVEMHHEALQEALPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAREAANFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGV 720 L+DA+D+ I +P R +DKP +P++DV+ I G GTV GRVE+G++K G + GL T VEM + L E GDNVG ++ ++++RG V +K + F ++V +++ + G + P + + + +++ I +L + +++ GD + KP+ ++ +F++R+ +TV GV Sbjct: 192 LMDAVDSYIPQPVRATDKPFLMPIEDVFSISGRGTVVTGRVESGIIKVGEEIEI--VGLKDTQKTTCTGVEMFRKLLDEGQAGDNVGILLRGTKREEVERGQVL--AKPGSIKPHDKFEAEVYVLSK--EEGGRHTPFTNDYRPQFYFRTTDVTGTI------KLPADKQWVMPGDNATFTVELIKPIAMQEGL------KFSIREGGRTVGAGV 388 The following BLAST results are available for this feature:
BLAST of CX290139 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290139 ID=CX290139; Name=CX290139; organism=Citrus clementina; type=EST; length=721bpback to top |