CX290142

Overview
NameCX290142
Unique NameCX290142
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14735 contig Ccv1_Contig14735:261..947. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 2.556e-73
Identity = 138/224 (61.61%), Postives = 167/224 (74.55%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQKCFF 671
            ASILLD+T +  +EK A  N NSARGF+VID MKAAVE+ACP+ VSCAD+L IAA+ SV L+GGPSW VP GRRDS      LAN NLP PF TL++LK  F+NVGL+   DLVALSG HTFG+ QCQF   RLY+F+NTG PDPTLD ++L  LRK CP+ GN  VL +FD+ TP +FDNKY+ NL+  KGL+QSDQELFS+P A DT  +V ++   Q  FF
Sbjct:   73 ASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESVVLAGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLDKSYLSTLRKQCPRNGNQSVLVDFDLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDASDTLPLVREYADGQGKFF 296          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 273.478 bits (698), Expect = 7.437e-73
Identity = 138/224 (61.61%), Postives = 165/224 (73.66%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQKCFF 671
            ASILLD+T +  +EK A  N  SARGF+VID MKAAVE+ACP+ VSCAD+L IAA++SV L+GGPSW VP GRRDS      LAN NLPGP  TL  LK  FRNVGL+   DLVALSG HTFG+ QCQF   RLY+F+N+GKPDPTLD ++L  LRK CP+ GN  VL +FD+ TP +FDNKY+ NL+  KGL+QSDQELFS+P A DT  +V  +   Q  FF
Sbjct:   75 ASILLDNTTSFRTEKDAFGNARSARGFDVIDTMKAAVEKACPKTVSCADLLAIAAQKSVVLAGGPSWKVPSGRRDSLRGFMDLANDNLPGPSSTLQVLKDKFRNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNSGKPDPTLDKSYLSTLRKQCPRNGNLSVLVDFDLRTPTIFDNKYYVNLKENKGLIQSDQELFSSPDASDTIPLVRAYADGQGKFF 298          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 9.713e-73
Identity = 134/224 (59.82%), Postives = 165/224 (73.66%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFFK 674
            ASILLD T +I SEK A PN NSARGF V+DN+K A+E ACP VVSC+D+L +A+E SV+L+GGPSW V LGRRDS TAN A AN ++P P ++L  +   F  VGLN   DLVALSGAHTFGRA+C  F  RL++F+ TG PDPTL++T L  L++LCPQ G+   + N D++TPD FDN YF+NL+   GLLQSDQELFST G+ T AIV  F  NQ  FF+
Sbjct:   81 ASILLDDTGSIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTN-DLVALSGAHTFGRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSNDGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQ 303          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 9.713e-73
Identity = 139/224 (62.05%), Postives = 167/224 (74.55%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGA-DTAAIVEDFGRNQKCFF 671
            ASILLD+T +  +EK A  N NSARGF  +D +KAAVERACPR VSCAD+LTIAA++SV L+GGPSW VPLGRRDS  A   LAN NLP PF TL +LK +F  VGL+   DLVALSG HTFG+ QC+F   RLY+F+NTG PDPTL+ T+LQ LR+ CP  GN  VL +FD+ TP VFDNKY+ NL+ +KGL+QSDQELFS+P A DT  +V  F    + FF
Sbjct:   79 ASILLDNTTSFLTEKDALGNANSARGFPTVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPLNGNQSVLVDFDLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATDTIPLVRSFADGTQKFF 302          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 1.657e-72
Identity = 136/224 (60.71%), Postives = 164/224 (73.21%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTP-GADTAAIVEDFGRNQKCFF 671
            ASILLD+T +  +EK A  N NSARGF+VID MKAA+E+ACPR VSCAD+L IAA+ S+ L+GGPSW VP GRRDS      LAN NLPGP  TL +LK  F+NVGL+   DLVALSG HTFG++QCQF   RLY+F  TG PDPTLD ++L  LRK CP+ GN  VL +FD+ TP +FDNKY+ NL+  KGL+QSDQELFS+P  ADT  +V  +   Q  FF
Sbjct:   73 ASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFGKSQCQFIMDRLYNFGETGLPDPTLDKSYLATLRKQCPRNGNQSVLVDFDLRTPTLFDNKYYVNLKENKGLIQSDQELFSSPDAADTLPLVRAYADGQGTFF 296          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 1.832e-71
Identity = 133/224 (59.38%), Postives = 163/224 (72.77%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFFK 674
            ASILLD + +I SEK A PN NSARGF V+DN+K A+E  CP VVSC+DIL +A+E SV+L+GGPSW V LGRRDS TAN A AN  +P PF+ L  + S F  VGLN   DLVALSGAHTFGRA+C  F  RL++F+ T  PDPTL++T L  L++LCPQ G+   + N D++TPD FDN YF+NL+   GLLQSDQELFST G+ T A+V  F  NQ  FF+
Sbjct:   51 ASILLDDSGSIQSEKNAGPNANSARGFNVVDNIKTALENTCPGVVSCSDILALASEASVSLTGGPSWTVLLGRRDSLTANLAGANSAIPSPFEGLSNITSKFSAVGLNTN-DLVALSGAHTFGRARCGVFNNRLFNFSGTNGPDPTLNSTLLSSLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSNNGLLQSDQELFSTLGSATIAVVTSFASNQTLFFQ 273          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 5.515e-68
Identity = 126/223 (56.50%), Postives = 160/223 (71.75%), Query Frame = 3
Query:    6 SILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFFK 674
            S+LLD T++I SEK A  N NS RGF V+D++K A+E ACP +VSC+DIL +A+E SV+L+GGPSW V LGRRD  TAN + AN +LP PF+ L+ + S F  VGL    D+V+LSGAHTFGR QC  F  RL++FN TG PDPTL++T L  L++LCPQ G+   + N D++TPD FDN YF+NL+   GLLQSDQELFS  G+ T  IV  F  NQ  FF+
Sbjct:   83 SLLLDDTSSIQSEKNAPANANSTRGFNVVDSIKTALENACPGIVSCSDILALASEASVSLAGGPSWTVLLGRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGLKTT-DVVSLSGAHTFGRGQCVTFNNRLFNFNGTGNPDPTLNSTLLSSLQQLCPQNGSNTGITNLDLSTPDAFDNNYFTNLQSNNGLLQSDQELFSNTGSATVPIVNSFASNQTLFFE 304          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.007e-61
Identity = 124/223 (55.61%), Postives = 159/223 (71.30%), Query Frame = 3
Query:    6 SILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGG-NGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFF 671
            SILLD+  T  +EK  AP N  A GF+++D++K A+E  CP VVSCADIL +A+E  V L+ GPSW V  GR+DS TANR+ AN ++P PF+TL  +   F N G+ D  DLVALSGAHTFGRA+C  F  RL++FN +G PD T+DATFLQ L+ +CPQGG NG    N D++TP+ FDN YF+NL+  +GLLQ+DQELFST G+ T AIV  +  +Q  FF
Sbjct:   74 SILLDTDGT-QTEK-DAPANVGAGGFDIVDDIKTALENVCPGVVSCADILALASEIGVVLAKGPSWQVLFGRKDSLTANRSGANSDIPSPFETLAVMIPQFTNKGM-DLTDLVALSGAHTFGRARCGTFEQRLFNFNGSGNPDLTVDATFLQTLQGICPQGGNNGNTFTNLDISTPNDFDNDYFTNLQSNQGLLQTDQELFSTSGSATIAIVNRYAGSQTQFF 293          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 2.931e-61
Identity = 129/226 (57.08%), Postives = 152/226 (67.26%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGA--DTAAIVEDFGRNQKCFFK 674
            AS+LLD TN   SEK A PN NS RGFEVID +KAAVE ACP VVSCADILT+AA  SV LSGGP W V LGR+D   AN++ AN NLP PF+ LD + + F  VGLN   D+VALSGAHTFG+A+C  F  RL++F   G PD TL+ T L  L+ +CP GGNG   A  D  + D FDN YF NL   KGLL SDQ LFS+  A   T  +VE + R+Q  FF+
Sbjct:   79 ASVLLDGTN---SEKLAIPNVNSVRGFEVIDTIKAAVENACPGVVSCADILTLAARDSVYLSGGPQWRVALGRKDGLVANQSSAN-NLPSPFEPLDAIIAKFAAVGLN-VTDVVALSGAHTFGQAKCDLFSNRLFNFTGAGTPDSTLETTLLSDLQTVCPIGGNGNKTAPLDRNSTDAFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKRLVEAYSRSQYLFFR 299          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 230.72 bits (587), Expect = 5.528e-60
Identity = 127/226 (56.19%), Postives = 151/226 (66.81%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGA--DTAAIVEDFGRNQKCFFK 674
            AS+LLD     DSEK A PN NSARGFEVID +KAAVE ACP VVSCADILT+AA  SV LSGGP W V LGR+D   AN+  AN NLP PF+ LD + + F  V LN   D+VALSGAHTFG+A+C  F  RL++F   G PD TL+ + L  L+ +CP GGN  + A  D +T D FDN YF NL   KGLL SDQ LFS+  A   T  +VE + R+Q  FF+
Sbjct:   79 ASLLLDGA---DSEKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSAN-NLPSPFEPLDAIIAKFVAVNLNIT-DVVALSGAHTFGQAKCAVFSNRLFNFTGLGNPDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNYFKNLLEGKGLLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFR 299          
The following BLAST results are available for this feature:
BLAST of CX290142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER37_ARATH2.556e-7361.61Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER2_ARMRU7.437e-7361.61Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER53_ARATH9.713e-7359.82Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER1B_ARMRU9.713e-7362.05Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER38_ARATH1.657e-7260.71Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PERA2_ARMRU1.832e-7159.38Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER54_ARATH5.515e-6856.50Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PERX_TOBAC1.007e-6155.61Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PERN_ARMRU2.931e-6157.08Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER59_ARATH5.528e-6056.19Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC02020H11SK IF1 Citrus clementina cDNA clone C02020H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290142 ID=CX290142; Name=CX290142; organism=Citrus clementina; type=EST; length=687bp
AGGCATCGATCTTGCTGGACAGCACTAACACCATAGACAGCGAGAAATTT
GCTGCGCCAAATAACAATTCGGCGAGGGGTTTTGAAGTTATTGATAACAT
GAAAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGTTTCCTGCGCTGATA
TTCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCA
TGGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCT
TGCAAATCAGAATCTTCCAGGACCATTTGATACTCTTGATGAGCTCAAAT
CTAGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGATCTTGTTGCACTC
TCCGGAGCACACACGTTCGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAG
ATTATACGATTTTAACAACACTGGCAAGCCAGACCCAACCCTAGACGCAA
CCTTCTTACAACAACTGAGGAAACTATGCCCACAAGGTGGAAACGGCGGC
GTTCTTGCTAATTTTGATGTCACGACACCTGATGTTTTCGACAACAAATA
CTTCTCCAATCTTAGAGGCCGCAAAGGCCTTCTGCAGAGTGATCAAGAGT
TGTTTTCGACTCCTGGTGCCGATACCGCTGCCATTGTCGAGGACTTTGGG
AGGAACCAGAAATGCTTCTTTAAAACTTTGTGACCTC
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