CX290142

Overview
NameCX290142
Unique NameCX290142
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14735 contig Ccv1_Contig14735:261..947. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.664e-56
Identity = 121/222 (54.50%), Postives = 149/222 (67.12%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCF 668
            ASILLD T +I+SEK A PN  SARGF +I++ K  VE+ CP VVSCADILT+AA  + A  GGPSW V LGRRDS TA++ LA  +LPGPFD L+ L SSF + GL+ + D+VALSGAHT G+AQC  FR R+Y  N T      +DA F    R+ CPQ G  G LA  D+ TP+ FDN YF NL  +KGLLQSDQ LF+  G  T  IV ++  + + F
Sbjct:   78 ASILLDETPSIESEKTALPNLGSARGFGIIEDAKREVEKICPGVVSCADILTVAARDASAAVGGPSWTVKLGRRDSTTASKTLAETDLPGPFDPLNRLISSFASKGLSTR-DMVALSGAHTIGQAQCFLFRDRIYS-NGT-----DIDAGFASTRRRQCPQEGENGNLAPLDLVTPNQFDNNYFKNLIQKKGLLQSDQVLFN--GGSTDNIVSEYSNSARAF 290          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.840e-55
Identity = 122/225 (54.22%), Postives = 153/225 (68.00%), Query Frame = 3
Query:    6 SILLDST--NTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFN-NTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFF 671
            S+LLD+   + ++ EK A  N  S  GFEVID++K A+E  CP VVSCADIL IAAE SVAL+GGPS  V LGRRD RTA RA A   LP   D+L+ L S F +V   D  DLVALSGAHTFGR QC     RL++F+ N+G+ DP+++  FLQ LR+ CPQGG+    AN D T+PD FDN YF NL+  +G+++SDQ LFS+ GA T ++V  F  NQ  FF
Sbjct:   75 SVLLDAAPADGVEGEKEAFQNAGSLDGFEVIDDIKTALENVCPGVVSCADILAIAAEISVALAGGPSLDVLLGRRDGRTAIRADAVAALPLGPDSLEILTSKF-SVHNLDTTDLVALSGAHTFGRVQCGVINNRLHNFSGNSGQSDPSIEPEFLQTLRRQCPQGGDLTARANLDPTSPDSFDNDYFKNLQNNRGVIESDQILFSSTGAPTVSLVNRFAENQNEFF 298          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.403e-55
Identity = 111/224 (49.55%), Postives = 148/224 (66.07%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFFK 674
            ASILLD + TI SEK A PN NS RGF+VID +KA +E+ACP+ VSCADIL +AA  S  LSGGPSW +PLGRRDSRTA+   AN N+P P  T+  L + F+  GLN++ DLV+LSG HT G A+C  F+ RLY+ N   +PD TL+ ++   LR +CP  G    ++  D+ +P  FDN YF  L   KGLL SD+ L +     T A+V+ +  +++ FF+
Sbjct:   94 ASILLDDSATIRSEKNAGPNKNSVRGFQVIDEIKAKLEQACPQTVSCADILALAARGSTILSGGPSWELPLGRRDSRTASLNGANTNIPAPNSTIQNLLTMFQRKGLNEE-DLVSLSGGHTIGVARCTTFKQRLYNQNGNNQPDETLERSYYYGLRSICPPTGGDNNISPLDLASPARFDNTYFKLLLWGKGLLTSDEVLLTGNVGKTGALVKAYAEDERLFFQ 316          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 4.533e-54
Identity = 116/223 (52.02%), Postives = 148/223 (66.37%), Query Frame = 3
Query:    6 SILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQ--GGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCF 668
            SILLD T++   E+ AAPN NSARGF VIDN+K+AVE+ACP VVSCADIL IAA  SV   GGP+W V +GRRD+RTA++A AN N+P P  +L +L SSF  VGL+ + D+VALSGAHT G+++C  FR R+Y+  N       ++A F    ++ CP+  G   G LA  DVTT   FDN YF NL  ++GLL SDQ LF+  G  T +IV  +  N   F
Sbjct:   80 SILLDDTSSFTGEQNAAPNRNSARGFNVIDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTR-DMVALSGAHTIGQSRCTNFRARIYNETN-------INAAFATTRQRTCPRASGSGDGNLAPLDVTTAASFDNNYFKNLMTQRGLLHSDQVLFN--GGSTDSIVRGYSNNPSSF 292          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 5.920e-54
Identity = 111/224 (49.55%), Postives = 147/224 (65.62%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFFK 674
            ASILLDS+ TI SEK + PN NSARGFE+I+ +K A+E+ CP  VSCADIL +AA  S  ++GGPSW VPLGRRD+R A+ + +N ++P P +T   + + F+  GL D +DLV+LSG+HT G ++C  FR RLY+ +  GKPD TL   +   LR+ CP+ G    L   D  TP  FDN YF NL   KGLL SD+ LF T    +  +VE +  NQ+ FF+
Sbjct:   82 ASILLDSSGTIISEKRSNPNRNSARGFELIEEIKHALEQECPETVSCADILALAARDSTVITGGPSWEVPLGRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGL-DLVDLVSLSGSHTIGNSRCTSFRQRLYNQSGNGKPDMTLSQYYATLLRQRCPRSGGDQTLFFLDFATPFKFDNHYFKNLIMYKGLLSSDEILF-TKNKQSKELVELYAENQEAFFE 303          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 1.319e-53
Identity = 107/223 (47.98%), Postives = 148/223 (66.37%), Query Frame = 3
Query:    6 SILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFFK 674
            S+LLDS+  + +EK + PN+ SARGF+V+D +KA +E+ CP  VSCAD+LT+AA  S  L+GGPSW VPLGRRDSR+A+ + +N N+P P +T   + S F   GL D  DLVALSG+HT G ++C  FR RLY+ +  G PD TL+ +F   LR+ CP+ G   +L+  D+ +   FDN YF NL   KGLL SDQ LFS+    +  +V+ +  +Q  FF+
Sbjct:   80 SLLLDSSGRVATEKNSNPNSKSARGFDVVDQIKAELEKQCPGTVSCADVLTLAARDSSVLTGGPSWVVPLGRRDSRSASLSQSNNNIPAPNNTFQTILSKFNRQGL-DITDLVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDMTLEQSFAANLRQRCPKSGGDQILSVLDIISAASFDNSYFKNLIENKGLLNSDQVLFSS-NEKSRELVKKYAEDQGEFFE 300          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 5.012e-53
Identity = 109/223 (48.88%), Postives = 148/223 (66.37%), Query Frame = 3
Query:    6 SILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFFK 674
            S+LLD++ +I +EK + PN+ SARGFEV+D +KAA+E  CP  VSCAD LT+AA  S  L+GGPSW VPLGRRDS TA+RA  N++LP P +  D +   F N GLN   DLVALSG+HT G ++C  FR RLY+ + +G PD TL+ ++   LR+ CP+ G    L+  D+ +   FDN YF NL    GLL SDQ LFS+    +  +V+ +  +Q+ FF+
Sbjct:   85 SLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWTVPLGRRDSATASRAKPNKDLPEPDNLFDTIFLRFSNEGLN-LTDLVALSGSHTIGFSRCTSFRQRLYNQSGSGSPDTTLEKSYAAILRQRCPRSGGDQNLSELDINSAGRFDNSYFKNLIENMGLLNSDQVLFSS-NEQSRELVKKYAEDQEEFFE 305          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 8.548e-53
Identity = 115/224 (51.34%), Postives = 143/224 (63.84%), Query Frame = 3
Query:    6 SILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFFKT 677
            S+LL+    + SE  AAP N +  GF +++N+KAAVE+ACP VVSCADIL IA+  SV L+GGP W V LGRRDSR AN   A   LP PF+ + +LK  F  V L D  DLVALSGAHTFG+++CQFF  RL    N   PD TL+  + QQLR+ C  G +     N D TTP+ FD  Y++NL+   G L SDQ L STPG DT  IV  F  +Q  FF++
Sbjct:   48 SVLLEDQPGVVSE-LAAPGNANITGFNIVNNIKAAVEKACPGVVSCADILAIASVGSVNLAGGPCWEVQLGRRDSRRANLQGAIDGLPSPFENVTQLKRKFDRVDL-DSTDLVALSGAHTFGKSRCQFFDRRL----NVSNPDSTLNPRYAQQLRQACSSGRD--TFVNLDPTTPNKFDKNYYTNLQSNTGPLTSDQVLHSTPGEDTVKIVNLFAASQNQFFES 263          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 3.248e-52
Identity = 113/223 (50.67%), Postives = 145/223 (65.02%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQ-NLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCF 668
            ASILL+ T+TI+SE+ A PN  S RGFEVID  K+ VE+ CP +VSCADI+ +AA  +    GGP WAV +GRRDS  A +ALAN   LPG  DTLD+L   F   GLN + DLVALSGAHT G++QC  FR RLY+ ++       +DA F    ++ CP  G  G LA  D+ TP+ FDN Y+ NL  +KGLL +DQ LF + GA T  IV ++ +N+  F
Sbjct:   75 ASILLEGTSTIESERDALPNFKSVRGFEVIDKAKSEVEKVCPGIVSCADIIAVAARDASEYVGGPKWAVKVGRRDSTAAFKALANSGELPGFKDTLDQLSGLFSKKGLNTR-DLVALSGAHTIGQSQCFLFRDRLYENSS------DIDAGFASTRKRRCPTVGGDGNLAALDLVTPNSFDNNYYKNLMQKKGLLVTDQVLFGS-GASTDGIVSEYSKNRSKF 289          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 4.243e-52
Identity = 114/222 (51.35%), Postives = 140/222 (63.06%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCF 668
            AS+LLD T+    EK A PN NS RGFEVID +K+ VE  CP VVSCADIL +AA  SV   GG SW V LGRRDS TA+ + AN +LP PF  L  L S+F N G   K +LV LSGAHT G+AQC  FR R+Y+ +N       +D T+ + L+  CP  G    L+ FDVTTP+ FDN Y+ NLR +KGLL SDQ+LF+  G  T + V  +  N   F
Sbjct:   73 ASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTK-ELVTLSGAHTIGQAQCTAFRTRIYNESN-------IDPTYAKSLQANCPSVGGDTNLSPFDVTTPNKFDNAYYINLRNKKGLLHSDQQLFN--GVSTDSQVTAYSNNAATF 284          
The following BLAST results are available for this feature:
BLAST of CX290142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PERX_NICSY1.664e-5654.50Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]
PER58_ARATH1.840e-5554.22Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER9_ARATH2.403e-5549.55Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PER52_ARATH4.533e-5452.02Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER72_ARATH5.920e-5449.55Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER49_ARATH1.319e-5347.98Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PER14_ARATH5.012e-5348.88Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PER2_CUCSA8.548e-5351.34Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]
PER5_ARATH3.248e-5250.67Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PER1_ARAHY4.243e-5251.35Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]

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Properties
Property NameValue
Genbank descriptionC02020H11SK IF1 Citrus clementina cDNA clone C02020H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290142 ID=CX290142; Name=CX290142; organism=Citrus clementina; type=EST; length=687bp
AGGCATCGATCTTGCTGGACAGCACTAACACCATAGACAGCGAGAAATTT
GCTGCGCCAAATAACAATTCGGCGAGGGGTTTTGAAGTTATTGATAACAT
GAAAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGTTTCCTGCGCTGATA
TTCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCA
TGGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCT
TGCAAATCAGAATCTTCCAGGACCATTTGATACTCTTGATGAGCTCAAAT
CTAGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGATCTTGTTGCACTC
TCCGGAGCACACACGTTCGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAG
ATTATACGATTTTAACAACACTGGCAAGCCAGACCCAACCCTAGACGCAA
CCTTCTTACAACAACTGAGGAAACTATGCCCACAAGGTGGAAACGGCGGC
GTTCTTGCTAATTTTGATGTCACGACACCTGATGTTTTCGACAACAAATA
CTTCTCCAATCTTAGAGGCCGCAAAGGCCTTCTGCAGAGTGATCAAGAGT
TGTTTTCGACTCCTGGTGCCGATACCGCTGCCATTGTCGAGGACTTTGGG
AGGAACCAGAAATGCTTCTTTAAAACTTTGTGACCTC
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