CX290142

Overview
NameCX290142
Unique NameCX290142
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14735 contig Ccv1_Contig14735:261..947. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 7.237e-52
Identity = 104/223 (46.64%), Postives = 148/223 (66.37%), Query Frame = 3
Query:    6 SILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFFK 674
            S+LLD++ +I +EK + PN+ SARGFEV+D +KAA+E  CP  VSCAD LT+AA  S  L+GGPSW VPLGRRDS +A+ + +N N+P P +T + + + F N GL D  D+VALSG+HT G ++C  FR RLY+ +  G PD TL+ ++   LR+ CP+ G    L+  D+ +   FDN YF NL    GLL SD+ LFS+    +  +V+ +  +Q+ FF+
Sbjct:   86 SLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWMVPLGRRDSTSASLSGSNNNIPAPNNTFNTIVTRFNNQGL-DLTDVVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDRTLEQSYAANLRQRCPRSGGDQNLSELDINSAGRFDNSYFKNLIENMGLLNSDEVLFSS-NEQSRELVKKYAEDQEEFFE 306          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER36_ARATH (Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=2 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 3.362e-49
Identity = 103/224 (45.98%), Postives = 140/224 (62.50%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFFK 674
            AS+LLDS+ T++SEK +  N +SARGFEVID +K+A+E  CP  VSCAD+L + A  S+ + GGPSW V LGRRD+R A+   + +N+P P  TL  + + F   GL D  DLVAL G+HT G ++C  FR RLY+      PD TL+  +   L++ CP  GN   L N D  TP  FDN Y+ NL   +GLL SD+ LF T   +T  +V+ +  N+  FF+
Sbjct:   90 ASVLLDSSGTMESEKRSNANRDSARGFEVIDEIKSALENECPETVSCADLLALVARDSIVICGGPSWEVYLGRRDAREASLIGSMENIPSPESTLQTILTMFNFQGL-DLTDLVALLGSHTIGNSRCIGFRQRLYNHTGNNDPDQTLNQDYASMLQQGCPISGNDQNLFNLDYVTPTKFDNYYYKNLVNFRGLLSSDEILF-TQSIETMEMVKYYAENEGAFFE 311          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 194.512 bits (493), Expect = 4.390e-49
Identity = 107/223 (47.98%), Postives = 145/223 (65.02%), Query Frame = 3
Query:    6 SILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGG--VLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCF 668
            SILLD T++   E+ A PN NSARGF VI+++K+AVE+ACP VVSCADIL IAA  SV   GGP+W V +GRRD++TA++A AN N+P P  +L +L SSF  VGL+ + D+VALSGAHT G+++C  FR R+Y+  N       ++A F    ++ CP+    G   LA  D+ +   FDN YF NL  ++GLL SDQ LF+  G  T +IV  +  +   F
Sbjct:   52 SILLDDTSSFTGEQNAGPNRNSARGFTVINDIKSAVEKACPGVVSCADILAIAARDSVVQLGGPNWNVKVGRRDAKTASQAAANSNIPAPSMSLSQLISSFSAVGLSTR-DMVALSGAHTIGQSRCVNFRARVYNETN-------INAAFATLRQRSCPRAAGSGDANLAPLDINSATSFDNSYFKNLMAQRGLLHSDQVLFN--GGSTDSIVRGYSNSPSSF 264          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 9.781e-49
Identity = 105/224 (46.88%), Postives = 139/224 (62.05%), Query Frame = 3
Query:    6 SILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDAT--FLQQLRKLCPQ-GGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCF 668
            SILL+ +     EK A PN NS RGFEVI+++K+ +E +CP  VSCADI+ +AA  +V L+GGP W VPLGRRDS TA+   AN NLP PF+ L+ + + F  +GL D  D+V LSGAHT G AQC   + RL++F  +G+PDP L A+   L +L+  CP    +   LA  D  +   FDN Y+ NL    GLL SDQ L + P A  AA+V+ +  N   F
Sbjct:   98 SILLNDSEDFKGEKNAQPNRNSVRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGGPFWPVPLGRRDSLTASEQAANTNLPSPFEALENITAKFVTLGL-DLKDVVVLSGAHTIGFAQCFVIKHRLFNFKGSGQPDPNLAASSALLSKLKDTCPNVDSSDSKLAALDAASSVKFDNAYYVNLMNNIGLLDSDQTLMTDPTA--AALVKSYSENPYLF 318          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.277e-48
Identity = 106/224 (47.32%), Postives = 140/224 (62.50%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGG--VLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCF 668
            AS+LLD T++   E+ A PN NS RG  VIDN+K+ VE  CP VVSCADI+ IAA  SV + GGP W V LGRRDS+TA+ + AN N+P P  +L  L S F+  GL+ + D+VALSGAHT G+A+C  FR R+Y+  N       +D++F +  +  CP     G   LA  D+ TP  FDN Y+ NL  +KGLL SDQ L++  G  T + V+ +  N K F
Sbjct:   76 ASVLLDDTSSFTGEQTAVPNKNSIRGLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLSTR-DMVALSGAHTIGQARCTSFRARIYNETN-------IDSSFAKTRQASCPSASGSGDNNLAPLDLQTPTTFDNYYYKNLINQKGLLHSDQVLYN--GGSTDSTVKTYVNNPKTF 289          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.277e-48
Identity = 109/226 (48.23%), Postives = 142/226 (62.83%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLD-ATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQEL-FSTPGADTAAIVEDFGRNQKCFFK 674
            AS+LLD T  +  EK A PN NS RGFEVID++K+ +E  CP  VSCADIL +AA  SV +SGGP W V +GR+DSRTA++  A   LP P  T+  L S+F+N+GL+ + D+VALSG HT G+A+C  F  RL     TG+P    D   FL+ L++LC   G    +   D+ TP  FDN+Y+ NL   +GLL SDQ L    PG  T AIVE +  +Q  FF+
Sbjct:   99 ASVLLDDTEGLVGEKTAPPNLNSLRGFEVIDSIKSDIESVCPETVSCADILAMAARDSVVVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGLS-QTDMVALSGGHTLGKARCTSFTARLQPL-QTGQPANHGDNLEFLESLQQLCSTVGPSVGITQLDLVTPSTFDNQYYVNLLSGEGLLPSDQALAVQDPG--TRAIVETYATDQSVFFE 320          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.277e-48
Identity = 107/222 (48.20%), Postives = 134/222 (60.36%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCF 668
            AS+LL        E+ A PN  S RGF VIDN+K  +E  C + VSCADILT+AA  SV   GGPSW VPLGRRDS TA+ +LAN +LPGP  +  +L+++F    LN  +D+VALSGAHT G+AQC  FR R+Y        D  ++  F   L+  CPQ G    LAN D  TP+ FDN Y++NL  +KGLL SDQ LF+    D    V +F  N   F
Sbjct:   72 ASVLLTGM-----EQNAGPNVGSLRGFGVIDNIKTQLESVCKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSTTASASLANSDLPGPSSSRSQLEAAFLKKNLN-TVDMVALSGAHTIGKAQCSNFRTRIYG------GDTNINTAFATSLKANCPQSGGNTNLANLDTMTPNAFDNAYYTNLLSQKGLLHSDQVLFNNETTDNT--VRNFASNAAAF 279          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.179e-48
Identity = 108/222 (48.65%), Postives = 143/222 (64.41%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCF 668
            AS++L +T T++SE+ +  N  SARGFEVID  K+AVE  CP VVSCADI+ +AA  +    GGP + V +GRRDS  A RA+A+++LP    +L++L   F   GLN + DLVALSGAHT G+AQC  F+GRLYD ++       +DA F    ++ CP  G    LA  D  TP+ FDN Y+ NL  +KGLL+SDQ LF T GA T +IV ++ RN   F
Sbjct:   70 ASVMLVATPTMESERDSLANFQSARGFEVIDQAKSAVESVCPGVVSCADIIAVAARDASEYVGGPRYDVKVGRRDSTNAFRAIADRDLPNFRASLNDLSELFLRKGLNTR-DLVALSGAHTLGQAQCLTFKGRLYDNSS------DIDAGFSSTRKRRCPVNGGDTTLAPLDQVTPNSFDNNYYRNLMQKKGLLESDQVLFGT-GASTDSIVTEYSRNPSRF 283          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.409e-47
Identity = 111/227 (48.90%), Postives = 139/227 (61.23%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQN-LPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCP--QGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFFK 674
            ASILLD T +   EK A PNNNS RG+EVID +K+ VER CP VVSCADIL I A  SV L GG  W+V LGRRDS TA+ + AN   LP P  TLD L + FR  GL+ + D+VALSGAHT G+A+C  FR R+Y+  N       +D +F    R+ CP   G      A  D+ TP+ FD  YF  L   +GLL SDQ LF+  G  T +IV  + R+ + F++
Sbjct:   79 ASILLDDTRSFLGEKTAGPNNNSVRGYEVIDAIKSRVERLCPGVVSCADILAITARDSVLLMGGRGWSVKLGRRDSITASFSTANSGVLPPPTSTLDNLINLFRANGLSPR-DMVALSGAHTIGQARCVTFRSRIYNSTN-------IDLSFALSRRRSCPAATGSGDNNAAILDLRTPEKFDGSYFMQLVNHRGLLTSDQVLFN--GGSTDSIVVSYSRSVQAFYR 295          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.409e-47
Identity = 107/226 (47.35%), Postives = 137/226 (60.62%), Query Frame = 3
Query:    6 SILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQN-LPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCP--QGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFFK 674
            S+LLD T +   EK + P+NNS RGFEVID +K  VE+ CP +VSCADIL I A  SV L GGP W+V LGRRDS TAN A AN   +P P  TL  L + F+  GL+ + D+VALSGAHT GRAQC  FR R+Y+ +N       +D +F    R+ CP   G      AN DV +PD FD+ ++  L  +KGLL SDQ LF+    D+  I   +  N   F++
Sbjct:   71 SLLLDDTPSFLGEKTSGPSNNSVRGFEVIDKIKFKVEKMCPGIVSCADILAITARDSVLLLGGPGWSVKLGRRDSTTANFAAANSGVIPPPITTLSNLINRFKAQGLSTR-DMVALSGAHTIGRAQCVTFRNRIYNASN-------IDTSFAISKRRNCPATSGSGDNKKANLDVRSPDRFDHGFYKQLLSKKGLLTSDQVLFNNGPTDSLVIA--YSHNLNAFYR 286          
The following BLAST results are available for this feature:
BLAST of CX290142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER15_ARATH7.237e-5246.64Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER36_ARATH3.362e-4945.98Peroxidase 36 OS=Arabidopsis thaliana GN=PER36 PE=... [more]
PERP7_BRARA4.390e-4947.98Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER10_ARATH9.781e-4946.88Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER4_VITVI1.277e-4847.32Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER40_ARATH1.277e-4848.23Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER1_WHEAT1.277e-4848.20Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PER4_ARATH2.179e-4848.65Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PER68_ARATH2.409e-4748.90Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PER67_ARATH2.409e-4747.35Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC02020H11SK IF1 Citrus clementina cDNA clone C02020H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290142 ID=CX290142; Name=CX290142; organism=Citrus clementina; type=EST; length=687bp
AGGCATCGATCTTGCTGGACAGCACTAACACCATAGACAGCGAGAAATTT
GCTGCGCCAAATAACAATTCGGCGAGGGGTTTTGAAGTTATTGATAACAT
GAAAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGTTTCCTGCGCTGATA
TTCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCA
TGGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCT
TGCAAATCAGAATCTTCCAGGACCATTTGATACTCTTGATGAGCTCAAAT
CTAGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGATCTTGTTGCACTC
TCCGGAGCACACACGTTCGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAG
ATTATACGATTTTAACAACACTGGCAAGCCAGACCCAACCCTAGACGCAA
CCTTCTTACAACAACTGAGGAAACTATGCCCACAAGGTGGAAACGGCGGC
GTTCTTGCTAATTTTGATGTCACGACACCTGATGTTTTCGACAACAAATA
CTTCTCCAATCTTAGAGGCCGCAAAGGCCTTCTGCAGAGTGATCAAGAGT
TGTTTTCGACTCCTGGTGCCGATACCGCTGCCATTGTCGAGGACTTTGGG
AGGAACCAGAAATGCTTCTTTAAAACTTTGTGACCTC
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