CX290142

Overview
NameCX290142
Unique NameCX290142
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14735 contig Ccv1_Contig14735:261..947. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.465e-36
Identity = 98/223 (43.95%), Postives = 129/223 (57.85%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFF 671
            ASILLDST    +EK  +P N S RG+E+ID+ K  +E  CP VVSCADI+ +AA  +V  +GGP + +P GR D +  ++    +NLP PF    +L  +F   G   + D+VALSGAHT G A+C  F+ RL        PD +LD+TF   L K C  G N      FD T  D FDN YF+ L+ + G+L SDQ LF+TP   T  +V  +  NQ  FF
Sbjct:   75 ASILLDSTKDNTAEK-DSPANLSLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGK-RSKIEDTRNLPSPFLNASQLIQTFGQRGFTPQ-DVVALSGAHTLGVARCSSFKARL------TVPDSSLDSTFANTLSKTCSAGDNAE--QPFDATRND-FDNAYFNALQMKSGVLFSDQTLFNTP--RTRNLVNGYALNQAKFF 283          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 1.913e-36
Identity = 86/200 (43.00%), Postives = 125/200 (62.50%), Query Frame = 3
Query:    6 SILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELF 605
            SIL++  N   SEK A   +   RGFE+++ +KA +E ACP VVSC+DI+ +AA  +++L+ GP++ VP GRRD R +N +LA +++P   D+++ LK+ F   GLN K DLV LS AHT G   C F   RLYDF   G+PDPT++ TFL +L   CPQ G+  V    D  +  +FD +   N++    +LQ+D  L+
Sbjct:   76 SILVN--NGAISEKNAF-GHEGVRGFEIVEAVKAELEAACPGVVSCSDIVALAARDAISLANGPAYEVPTGRRDGRVSNMSLA-KDMPEVSDSIEILKAKFMQKGLNAK-DLVLLSAAHTIGTTACFFMSKRLYDFLPGGQPDPTINPTFLPELTTQCPQNGDINVRLPIDRFSERLFDKQILQNIKDGFAVLQTDAGLY 270          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 5.567e-36
Identity = 88/205 (42.93%), Postives = 120/205 (58.54%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSAR-GFEVIDNMKAAVERA--CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFS 608
            AS+++ STNT  +EK    N + A  GF+ +   K AV+    C   VSCADILT+A    V L+GGP +AV LGRRD  +++ +     LP P   L++L + F   GL+   D++ALSGAHT G A C     RLY+FN T   DPT++  ++ +L+  CPQ  +  V  N D  TP  FDN Y+ NL+  KGL  SDQ LF+
Sbjct:   76 ASVMIASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPN-DMIALSGAHTLGFAHCTKVFNRLYNFNKTNNVDPTINKDYVTELKASCPQNIDPRVAINMDPNTPRQFDNVYYKNLQQGKGLFTSDQVLFT 279          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.115e-35
Identity = 89/225 (39.56%), Postives = 117/225 (52.00%), Query Frame = 3
Query:    6 SILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTP----------GADTAAIVEDFG 650
            S+LL+  N  D EK + PN  + RGFE+IDN+KAA+E+ CP +VSC+D+L + A  ++    GPSW V  GRRD    N   A  NLP PF+ +  L + F++ GL DK DLV LSG HT G   C     RLY+F   G  DP LD  +  +LR  C        L   D  +   FD  YF  +  R+GL QSD  L               +D +   +DFG
Sbjct:   82 SVLLELKNKKD-EKNSIPNL-TLRGFEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGPSWEVETGRRDGLVTNITEALLNLPSPFNNISSLITQFQSKGL-DKKDLVVLSGGHTIGNGHCPQITNRLYNFTGKGDSDPNLDTEYAVKLRGKCKPTDTTTAL-EMDPGSFKTFDESYFKLVSQRRGLFQSDAALLDNQETKSYVLKSLNSDGSTFFKDFG 302          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.763e-35
Identity = 88/224 (39.29%), Postives = 128/224 (57.14%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFFK 674
            AS+LLD   T    +  +P + + RGFE+ID++K+ +E++CP  VSCADILT A+  +    GGP W    GRRDS+  + A   + +P     +  L  +F++ GLN  LDLV LSGAHT G+A C   + RLY++N T   DP++DA +   L++ C          + D  TP VFDN+Y+ NL+   G+L +DQEL   P   TA +V+ F       F+
Sbjct:  100 ASVLLDYEGT----ERRSPASKTLRGFELIDDIKSEMEKSCPGKVSCADILTSASRAATVQLGGPYWPNVYGRRDSK-HSYARDVEKVPSGRRDVTALLETFQSYGLN-VLDLVVLSGAHTIGKASCGTIQSRLYNYNATSGSDPSIDAKYADYLQRRCRWASE---TVDLDPVTPAVFDNQYYINLQKHMGVLSTDQELVKDP--RTAPLVKTFAEQSPQIFR 312          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.763e-35
Identity = 91/229 (39.74%), Postives = 127/229 (55.46%), Query Frame = 3
Query:    6 SILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGG-----VLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFFKT 677
            SILL   N   SE+  AP N    GF +ID +K  +E  CP VVSCADIL +A   +V ++G PS+ V  GRRD  T N    +  LP P  ++DE  + F++ GL D LD+  L GAH+ G+  C +   RLY+F NTGKPDPT++ T + QLR LCP     G     V  N D  + + F + Y+S +     +L+ DQEL +    D+  I ++F    + F K+
Sbjct:   87 SILLQGPN---SER-TAPQNRGLGGFVIIDKIKQVLESRCPGVVSCADILNLATRDAVHMAGAPSYPVFTGRRDGGTLNADAVD--LPSPSISVDESLAYFKSKGL-DVLDMTTLLGAHSMGKTHCSYVVDRLYNFKNTGKPDPTMNTTLVSQLRYLCPPRTQKGQTDPLVYLNPDSGSSNRFTSSYYSRVLSHNAVLRVDQELLNND--DSKEITQEFASGFEDFRKS 306          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.038e-35
Identity = 92/224 (41.07%), Postives = 123/224 (54.91%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSAR-GFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFF 671
            AS+ + S N  D+EK A  N + A  GF+ +   K AVE  CP VVSCADIL +AA   V L GGP + V LGRRD   +  +     LP P   +  L   F + GL+   D++ALSGAHT G + C  F  RL++F+     DPT+D  + QQL + C    N   + + D+T+ D FDN Y+ NL  RKGL  SDQ LF+     + A V  F  N + F+
Sbjct:   81 ASVFIASENE-DAEKDADDNKSLAGDGFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLS-LTDMIALSGAHTIGSSHCNRFANRLHNFSTFMPVDPTMDPVYAQQLIQAC-SDPNPDAVVDIDLTSRDTFDNSYYQNLVARKGLFTSDQALFN--DLSSQATVVRFANNAEEFY 299          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 1.791e-34
Identity = 91/227 (40.09%), Postives = 125/227 (55.07%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSAR-GFEVIDNMKAAVER--ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFFK 674
            AS+++ ST T  +EK    N + A  GF+V+   K A++   +C   VSCADIL +A    V  + GPS+AV LGR D   +  A  N NLPGP + + EL   F    L  + D++ALS AHT G A C     R+Y+FN T   DPTL+  + ++L+  CP+  +  +  N D TTP  FDN YF NL+  KGL  SDQ LF+     +   V D+ +N   F K
Sbjct:   76 ASVMIQSTPTNKAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQE-DMIALSAAHTLGFAHCGKVFNRIYNFNLTHAVDPTLNKAYAKELQLACPKTVDPRIAINMDPTTPRQFDNIYFKNLQQGKGLFTSDQVLFT--DGRSKPTVNDWAKNSVAFNK 299          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 145.976 bits (367), Expect = 1.791e-34
Identity = 89/238 (37.39%), Postives = 123/238 (51.68%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCP-QGGNGGVLANFDVTTP----------------------------------DVFDNKYFSNLRGRKGLLQSDQELFST 611
            AS+LLD+     SEK A+PN  S +GF+VID +K+ +E  CP VVSCAD+L +AA  +V ++GGP + +  GR+DS  A R  A   LP P  TL  +   F   G N++ + V+L GAH+ G   C FF+ RLY+F+ TGKPDP L+  FLQ+L+  CP         A  D+  P                                  + F  +YF  L   KGL+ SDQ+L  +
Sbjct:  117 ASVLLDADEAHTSEKDASPNL-SLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNER-ETVSLFGAHSIGITHCTFFKNRLYNFSATGKPDPELNPGFLQELKTKCPFSVSTSSPSAPPDIGLPPSLPASDSENSYGMSSGNRNDEVIDLSYNNEGGDENFGTRYFRRLMQNKGLMSSDQQLMGS 352          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 2.339e-34
Identity = 89/206 (43.20%), Postives = 114/206 (55.34%), Query Frame = 3
Query:    6 SILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQ--NLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDF---NNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFS 608
            S+LLDS     +EK A PN  + RGF  ++ +KAAVE+ACP  VSCAD+L + A  +V LS GP WAVPLGRRD R    ++AN+   LP P     EL   F    L D  DLV LS  HT G + C  F  RLY+F   +N    DPTL+  ++ +LR  C    +   L   D  +   FD  YF N+  R+GL  SD EL +
Sbjct:   74 SVLLDSAGNSTAEKDATPNQ-TLRGFGFVERVKAAVEKACPGTVSCADVLALMARDAVWLSKGPFWAVPLGRRDGRV---SIANETDQLPPPTANFTELTQMFAAKNL-DLKDLVVLSAGHTIGTSHCFSFTDRLYNFTGLDNAHDIDPTLELQYMARLRSKCTSLQDNTTLVEMDPGSFKTFDLGYFKNVAKRRGLFHSDGELLT 274          
The following BLAST results are available for this feature:
BLAST of CX290142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER47_ARATH1.465e-3643.95Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER43_ARATH1.913e-3643.00Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]
PER51_ARATH5.567e-3642.93Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER56_ARATH2.115e-3539.56Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER7_ARATH2.763e-3539.29Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER61_ARATH2.763e-3539.74Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]
PER55_ARATH8.038e-3541.07Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER73_ARATH1.791e-3440.09Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER48_ARATH1.791e-3437.39Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER1_ORYSJ2.339e-3443.20Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]

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Properties
Property NameValue
Genbank descriptionC02020H11SK IF1 Citrus clementina cDNA clone C02020H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290142 ID=CX290142; Name=CX290142; organism=Citrus clementina; type=EST; length=687bp
AGGCATCGATCTTGCTGGACAGCACTAACACCATAGACAGCGAGAAATTT
GCTGCGCCAAATAACAATTCGGCGAGGGGTTTTGAAGTTATTGATAACAT
GAAAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGTTTCCTGCGCTGATA
TTCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCA
TGGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCT
TGCAAATCAGAATCTTCCAGGACCATTTGATACTCTTGATGAGCTCAAAT
CTAGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGATCTTGTTGCACTC
TCCGGAGCACACACGTTCGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAG
ATTATACGATTTTAACAACACTGGCAAGCCAGACCCAACCCTAGACGCAA
CCTTCTTACAACAACTGAGGAAACTATGCCCACAAGGTGGAAACGGCGGC
GTTCTTGCTAATTTTGATGTCACGACACCTGATGTTTTCGACAACAAATA
CTTCTCCAATCTTAGAGGCCGCAAAGGCCTTCTGCAGAGTGATCAAGAGT
TGTTTTCGACTCCTGGTGCCGATACCGCTGCCATTGTCGAGGACTTTGGG
AGGAACCAGAAATGCTTCTTTAAAACTTTGTGACCTC
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