CX290142

Overview
NameCX290142
Unique NameCX290142
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14735 contig Ccv1_Contig14735:261..947. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.989e-34
Identity = 86/205 (41.95%), Postives = 118/205 (57.56%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSAR-GFEVIDNMKAAVERA--CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFS 608
            AS+++ STN   +EK    N + A  GF+ +   K A++    C   VSCADILT+A    V L+GGP + V LGR D  ++  A     LP P D +++L S F   GL+   D++ALSGAHT G A C     R+Y FN T K DPT++  ++ +L+  CP+  +  V  N D TTP  FDN Y+ NL+  KGL  SDQ LF+
Sbjct:   76 ASVMIASTNNNKAEKDHEENLSLAGDGFDTVIKAKEALDAVPNCRNKVSCADILTMATRDVVNLAGGPQYDVELGRLDGLSSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLN-DMIALSGAHTLGFAHCTKVFNRIYTFNKTTKVDPTVNKDYVTELKASCPRNIDPRVAINMDPTTPRQFDNVYYKNLQQGKGLFTSDQVLFT 279          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 3.989e-34
Identity = 88/206 (42.72%), Postives = 119/206 (57.77%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARG--FEVIDNMKAAVERA--CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFS 608
            ASILL S +  D      P++ S  G  F+ +   K A++R   C   VSCADIL +A    V L+GGP++ V LGRRD R +  A    +LP P   LD+L + F   GL+ + D++ALSGAHT G A C  F  R+Y+F+     DPTL+  +  QLR++CP   +  +  N D T+P+ FDN YF NL+   GL  SDQ LFS
Sbjct:   74 ASILLASPSEKDH-----PDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLS-QTDMIALSGAHTIGFAHCGKFSKRIYNFSPKRPIDPTLNIRYALQLRQMCPIRVDLRIAINMDPTSPNTFDNAYFKNLQKGMGLFTSDQVLFS 273          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 6.805e-34
Identity = 88/230 (38.26%), Postives = 128/230 (55.65%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGG-----VLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFFKT 677
            AS+LL+  N   SEK A P N    GF +ID +K  +E+ CP VVSCADIL +A   +V L+G PS+ V  GRRD  T+++     +LP P  + D+  S F++ GLN  LD+  L G+H+ GR  C +   RLY++N TGKP PT++  FL ++ K CP     G     V  N D  +   F + ++S +   K +L+ DQ+L      DT  I ++F    + F K+
Sbjct:   86 ASVLLEGPN---SEKMA-PQNRGLGGFVLIDKIKIVLEQRCPGVVSCADILNLATRDAVHLAGAPSYPVFTGRRDGLTSDKQTV--DLPSPSISWDQAMSYFKSRGLN-VLDMATLLGSHSMGRTHCSYVVDRLYNYNKTGKPSPTMNKYFLSEMAKQCPPRTRKGQTDPLVYLNPDSGSNHSFTSSFYSRILSNKSVLEVDQQLLYND--DTKQISKEFSEGFEDFRKS 306          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 8.887e-34
Identity = 77/179 (43.02%), Postives = 108/179 (60.34%), Query Frame = 3
Query:   78 GFEVIDNMKAAVERA--CPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFS 608
            GF+ +   K AV+    C   VSCADIL +A    V L+GGPS+ V LGRRD R + +A     LP P   L++L   F   GL+ + D++ALSGAHT G A C     R+Y+F+ T + DP+++  ++ QL+++CP G +  +  N D T+P  FDN YF NL+  KGL  SDQ LF+
Sbjct:   98 GFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVLTGGPSYPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLS-QTDMIALSGAHTIGFAHCGKMSKRIYNFSPTTRIDPSINRGYVVQLKQMCPIGVDVRIAINMDPTSPRTFDNAYFKNLQQGKGLFTSDQILFT 275          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.161e-33
Identity = 88/191 (46.07%), Postives = 115/191 (60.21%), Query Frame = 3
Query:   36 DSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALS-GAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELF 605
            D E+FAA N   A GF+VID  K+ +ER CP VVSCADI+ +AA  ++A + GP + VP GRRD   AN   A +NLP   D+++ LKS FR  GL+D+ DLV LS GAHT G   C F   RL         DPT++  F Q LR  CPQGG+  V    D  +  VFDN+ F N++  +G++ SD  L+
Sbjct:   83 DDERFAAGNAGVA-GFDVIDEAKSELERFCPGVVSCADIVALAARDAIAEAKGPFYEVPTGRRDGLIANVDHA-KNLPDVQDSINTLKSKFREKGLSDQ-DLVLLSAGAHTIGTTACFFVIPRL------DAQDPTINPEFFQILRSKCPQGGDVNVRIPLDWDSQFVFDNQIFQNIKNGRGVILSDSVLY 264          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.516e-33
Identity = 83/205 (40.49%), Postives = 115/205 (56.10%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSAR-GFEVIDNMKAAVER--ACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFS 608
            AS+++ ST    +EK    N + A  GF+V+   K A++   +C   VSCADILT+A    V  +GGPS+ V LGR D   +  +    NLPGP D +D+L + F    L  + D++ALS AHT G A C     R++ FN     DPTL+  +  +L+K CP+  +  +  N D  TP  FDN YF NL+  KGL  SDQ LF+
Sbjct:   76 ASVMIQSTPKNKAEKDHPDNISLAGDGFDVVIQAKKALDSNPSCRNKVSCADILTLATRDVVVAAGGPSYEVELGRFDGLVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQE-DMIALSAAHTLGFAHCGKVFKRIHKFNGINSVDPTLNKAYAIELQKACPKNVDPRIAINMDPVTPKTFDNTYFKNLQQGKGLFTSDQVLFT 279          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.676e-32
Identity = 88/212 (41.51%), Postives = 117/212 (55.19%), Query Frame = 3
Query:   39 SEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNN---TGKPDPTLDATFLQQLRKLCPQG--GNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQ 659
            +E+ A PNN S RGF+VID  K AVE++CPR VSCADI+  AA  S++L+G  S+ VP GRRD R +N A    +LP P  T   L   F+   L+ + D+V LSGAHT GR+ C  F  R+++ +    T   D  L  ++ Q LR LCP        +    D  TP+V DN Y+  L    GL  SD +L   P    AA+V  F  N+
Sbjct:   97 TERDALPNNPSLRGFDVIDAAKTAVEQSCPRTVSCADIVAFAARDSISLTGSVSYQVPAGRRDGRVSN-ATETVDLPPPTSTAQSLTDLFKAKELSVE-DMVVLSGAHTVGRSFCASFFKRVWNTSTNPATAIVDAGLSPSYAQLLRALCPSNTTQTTPITTAMDPGTPNVLDNNYYKLLPRGMGLFFSDNQLRVNP--QMAALVSSFASNE 304          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.877e-32
Identity = 87/225 (38.67%), Postives = 126/225 (56.00%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNN-SARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANF-DVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFF 671
            AS+L+ ST    +E+ ++ N +    GF+V+   K A+E ACP  VSC+DI+ +A    +   GGP + + LGRRDSRT+  +L +  LP P   + +L   F + G + + ++VALSGAHT G + C+ F  R+   N+TG      +  F   L+K C    N   ++ F DV TP+ FDN YF N+    GLL+SD  LFS P   T   VE + R+Q  FF
Sbjct:   81 ASVLVSSTAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQ-EMVALSGAHTIGFSHCKEFTNRVNPNNSTG-----YNPRFAVALKKACSNSKNDPTISVFNDVMTPNKFDNMYFQNIPKGLGLLESDHGLFSDP--RTRPFVELYARDQSRFF 297          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.369e-32
Identity = 83/226 (36.73%), Postives = 119/226 (52.65%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLY--DFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFFK 674
            AS+L+   +T  S+    P N S  GF VID  K A+E  CP  VSCADI+ +AA  +V  +GGP   +P GRRD + +  A    N+     TLD++  +F + GL+ + DLV LSGAHT G + C  F GR       N    D +LD ++ + L   C    +  +  + D  T  VFDN+Y+ NL   KGL Q+D  L       T  +VE+   +++ FF+
Sbjct:   78 ASVLIQGNSTEKSD----PGNASLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQ-DLVVLSGAHTIGASHCNAFNGRFQRDSKGNFEVIDASLDNSYAETLMNKCSSSESSSLTVSNDPETSAVFDNQYYRNLETHKGLFQTDSALME--DNRTRTMVEELASDEESFFQ 296          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.853e-31
Identity = 81/206 (39.32%), Postives = 121/206 (58.74%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPS--WAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSF--RNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFD--VTTPDVFDNKYFSNLRGRKGLLQSDQEL 602
            AS+LLD +N   SEK A+PN  S RG+EVID++K+AVE+ C RVVSCADI+ +A    V L+ G    + +P GR D + ++  L +  LP P  T+ E  + F  R + LND   +V L G HT G   C F   RLY+F NT KPDP++D   +++L   CP+  +   + + D   T+ +  D  ++  ++  +G+L  DQ+L
Sbjct:   77 ASLLLDGSN---SEKKASPNL-SVRGYEVIDDIKSAVEKECDRVVSCADIIALATRDLVTLASGGKTRYEIPTGRLDGKISSALLVD--LPSPKMTVAETAAKFDQRKLSLND---MVLLLGGHTIGVTHCSFIMDRLYNFQNTQKPDPSMDPKLVEELSAKCPKSSSTDGIISLDQNATSSNTMDVSFYKEIKVSRGVLHIDQKL 273          
The following BLAST results are available for this feature:
BLAST of CX290142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER50_ARATH3.989e-3441.95Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER16_ARATH3.989e-3442.72Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER26_ARATH6.805e-3438.26Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]
PER45_ARATH8.887e-3443.02Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER13_ARATH1.161e-3346.07Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PER35_ARATH1.516e-3340.49Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER1_MAIZE1.676e-3241.51Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER63_ARATH4.877e-3238.67Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER46_ARATH6.369e-3236.73Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]
PER60_ARATH1.853e-3139.32Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC02020H11SK IF1 Citrus clementina cDNA clone C02020H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290142 ID=CX290142; Name=CX290142; organism=Citrus clementina; type=EST; length=687bp
AGGCATCGATCTTGCTGGACAGCACTAACACCATAGACAGCGAGAAATTT
GCTGCGCCAAATAACAATTCGGCGAGGGGTTTTGAAGTTATTGATAACAT
GAAAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGTTTCCTGCGCTGATA
TTCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCA
TGGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCT
TGCAAATCAGAATCTTCCAGGACCATTTGATACTCTTGATGAGCTCAAAT
CTAGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGATCTTGTTGCACTC
TCCGGAGCACACACGTTCGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAG
ATTATACGATTTTAACAACACTGGCAAGCCAGACCCAACCCTAGACGCAA
CCTTCTTACAACAACTGAGGAAACTATGCCCACAAGGTGGAAACGGCGGC
GTTCTTGCTAATTTTGATGTCACGACACCTGATGTTTTCGACAACAAATA
CTTCTCCAATCTTAGAGGCCGCAAAGGCCTTCTGCAGAGTGATCAAGAGT
TGTTTTCGACTCCTGGTGCCGATACCGCTGCCATTGTCGAGGACTTTGGG
AGGAACCAGAAATGCTTCTTTAAAACTTTGTGACCTC
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