CX290142

Overview
NameCX290142
Unique NameCX290142
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length687
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14735 contig Ccv1_Contig14735:261..947. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.569e-30
Identity = 86/226 (38.05%), Postives = 127/226 (56.19%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNN-SARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANF-DVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFFK 674
            AS+L+ ST    +E+ ++ N +    GF+VI   K A+E ACP  VSC+DI+++A    +   GGP + V LGRRDSRT+  +L    LP P   + ++   F + G   + ++VALSGAH+ G + C+ F GR+   NNTG      +  F   L+K C        ++ F D+ TP+ FDN Y+ NL+   GLL+SD  L+S P   T   V+ + +NQ  FFK
Sbjct:   70 ASVLISSTAFNTAERDSSINLSLPGDGFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQ-EMVALSGAHSIGFSHCKEFVGRV-GRNNTG-----YNPRFAVALKKACANYPKDPTISVFNDIMTPNKFDNMYYQNLKKGLGLLESDHGLYSDP--RTRYFVDLYAKNQDLFFK 286          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 5.961e-30
Identity = 91/231 (39.39%), Postives = 118/231 (51.08%), Query Frame = 3
Query:    3 ASILLDST-NTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALS-GGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGG---NGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGA--------DTAAIVEDFGRN 656
            AS+LLDS      SEK A PN  S  GFE+ID +K  +E+ CP  VSCADILT+AA  +V+     P W V  GR D R +    A ++LP        L+  F    L D +DLVALSGAHT G A C  F  RL +F   G  DP+L+ ++   L+  C       N   +   D T P  FD+ YF +L   KGL  SD  L + P A        ++ A +  FGR+
Sbjct:   95 ASLLLDSVAGKAVSEKEARPNL-SLSGFEIIDEIKYILEKRCPNTVSCADILTLAARDAVSYEFERPLWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDL-DVVDLVALSGAHTIGIAHCGVFGRRLLNFTGKGDTDPSLNPSYASFLKSECSDKSLRLNPSAVVGMDPTGPLAFDSGYFVSLLKNKGLFTSDAALLTDPSAAHIASVFQNSGAFLAQFGRS 323          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.017e-29
Identity = 87/227 (38.33%), Postives = 119/227 (52.42%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARG--FEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANF-DVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFFK 674
            AS+L+ +TN+ +  +     N S  G  F+++  +K A+E +CP VVSCADIL  A    V + GGP + V LGR+D   +       NLP    ++ ++ S F+  G   K +LVALSG HT G + C+ F  R++      K DP L+A F   L+ LC        +A F D  TP  FDN YF NL+   GLL SD  LF  P   T   VE +  NQ  FF+
Sbjct:   75 ASVLI-ATNSFNKAERDDDLNESLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPFYEVKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLK-ELVALSGGHTIGFSHCKEFSNRIFP-----KVDPELNAKFAGVLKDLCKNFETNKTMAAFLDPVTPGKFDNMYFKNLKRGLGLLASDHILFKDP--STRPFVELYANNQTAFFE 292          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.047e-29
Identity = 94/224 (41.96%), Postives = 119/224 (53.12%), Query Frame = 3
Query:    9 ILLDSTN-TIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFD--TLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCF 668
            ILLD  N T   E+ + PN NSARG+EVI   K +V   CP V VSCADIL IAA  SVA  GG +++V LGR D+RTAN + A   LP PFD  T+   K S +N  L    ++VAL+GAHT G A+C            +G  +P        QL+  C        L   D TTP +FD  Y+ NL   +G++ SDQ L  T  A TA  V D+  +   F
Sbjct:  121 ILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVAKLGGQTYSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFTLR---EMVALAGAHTVGFARCS-------TVCTSGNVNPA------AQLQCNCSATLTDSDLQQLD-TTPTMFDKVYYDNLNSNQGIMFSDQVL--TGDATTAGFVTDYSNDVNVF 325          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 4.272e-28
Identity = 90/222 (40.54%), Postives = 114/222 (51.35%), Query Frame = 3
Query:    9 ILLDSTN-TIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCF 668
            ILLD  N T   E+ + PN NSARG+EVI   K +V   CP + VSCADIL IAA  SVA  GG ++ V LGR D+RTAN   A   LP PFD L      F +     + ++VAL+GAHT G A+C            +G  +P        QL+  C        L   D TTP +FD  Y+ NL   +G++ SDQ L  T  A TA  V D+  +   F
Sbjct:  120 ILLDDINGTFTGEQNSPPNANSARGYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQTYNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFTLR-EMVALAGAHTVGFARCS-------TVCTSGNVNPA------AQLQCNCSATLTDSDLQQLD-TTPTMFDKVYYDNLNNNQGIMFSDQVL--TGDATTAGFVTDYSNDVSVF 324          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.623e-27
Identity = 77/222 (34.68%), Postives = 113/222 (50.90%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCF 668
            AS+L+D T    SEK +   N   RGFE+ID  K  +E  CP+ VSCADI+TIA   S+AL+GGP + V  GRRD   +N   ++  L GP  ++     +F+++G N    +  + G HT G A C  F+ R+         DP +D+    +L+K C    +  V    D  TP   DN+ +  +  ++ +L+ D  L       T +IV DF  N K F
Sbjct:   71 ASLLIDPTTERPSEK-SVGRNAGVRGFEIIDEAKKELELVCPKTVSCADIVTIATRDSIALAGGPKFKVRTGRRDGLRSNP--SDVKLLGPTVSVATSIKAFKSIGFNVSTMVALIGGGHTVGVAHCSLFQDRI--------KDPKMDSKLRAKLKKSCRGPNDPSVF--MDQNTPFRVDNEIYRQMIQQRAILRIDDNLIR--DGSTRSIVSDFAYNNKLF 277          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.769e-27
Identity = 81/225 (36.00%), Postives = 122/225 (54.22%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNN-SARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANF-DVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFF 671
            ASIL+ ST    SE+ A  N +     F+VI  +K AVE  CP +VSC+DIL  A    +++ GGP   V  GR+DS  ++       L  P  T+D + S F + GL  + ++VAL GAHT G + C+ F  R+++ ++   P   ++  +  +LRKLC    N   ++ F DV TP  FDN Y+ NL+   GLLQSD  +       T ++V+ +  ++  FF
Sbjct:   71 ASILVASTPRKTSERDADINRSLPGDAFDVITRIKTAVELKCPNIVSCSDILVGATRSLISMVGGPRVNVKFGRKDSLVSDMNRVEGKLARPNMTMDHIISIFESSGLTVQ-EMVALVGAHTIGFSHCKEFASRIFNKSDQNGP-VEMNPKYAAELRKLCANYTNDEQMSAFNDVFTPGKFDNMYYKNLKHGYGLLQSDHAI--AFDNRTRSLVDLYAEDETAFF 291          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 2.769e-27
Identity = 88/224 (39.29%), Postives = 113/224 (50.45%), Query Frame = 3
Query:    9 ILLDSTN-TIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRV-VSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFFK 674
            ILLD  N T   E+ + PNNNS RGFEVI   K +V  +CP + VSCADIL IAA  S+A  GG ++ V LGR D+ TAN + A   LP P D L      F +     + ++VAL+GAHT G A+C            +G  +P        QL+  C        L   D TTP VFD  Y+ NL   +G++ SDQ L  T    TA  V  +  N   F +
Sbjct:  120 ILLDDINGTFTGEQNSPPNNNSVRGFEVIAQAKQSVVDSCPNISVSCADILAIAARDSLAKLGGQTYTVALGRSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVR-EMVALAGAHTVGFARCS-------TVCTSGNVNPA------AQLQCNCSATLTDSDLQQLD-TTPAVFDKVYYDNLNNNQGIMFSDQVL--TGNTTTAGFVTTYSNNVTVFLE 326          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 6.169e-27
Identity = 84/225 (37.33%), Postives = 112/225 (49.78%), Query Frame = 3
Query:    6 SILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGR--LYDFNNTGKPDPTLDATFLQQLRKLCPQG-GNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGADTAAIVEDFGRNQKCFF 671
            S+L+    T  S+    P N S  GF VI+++K  +E  CP  VSCADIL +AA  +V   GGP   +P GRRD R +  A    N+     T+D++ + F + GL+   DLV LSGAHT G A C  F  R  L    N    D +LD ++ Q L   C         + + D  T   FDN+Y+ NL   KGL Q+D  L       T  IVE    +Q+ FF
Sbjct:   81 SVLIRGNGTERSD----PGNASLGGFAVIESVKNILEIFCPGTVSCADILVLAARDAVEALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVH-DLVVLSGAHTIGAAHCNTFNSRFKLDPKGNLELIDASLDNSYAQTLVNKCSSSLDPTTTVVDNDPETSSTFDNQYYKNLLAHKGLFQTDSALMEDD--RTRKIVEILANDQESFF 298          
BLAST of CX290142 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.795e-26
Identity = 80/226 (35.40%), Postives = 112/226 (49.56%), Query Frame = 3
Query:    3 ASILLDSTNTIDSEKFAAPNNNSARGFEVIDNMKAAVERACPRVVSCADILTIAAERSVALSGGPSWAVPLGRRDSRTANRALANQNLPGPFDTLDELKSSFRNVGLNDKLDLVALSGAHTFGRAQCQFFRGRLYDFNNTGKPDPTLDATFLQQLRKLCPQGGNGGVLANFDVTTPDVFDNKYFSNLRGRKGLLQSDQELFSTPGAD--TAAIVEDFGRNQKCFFK 674
            AS+L+D      SEK   PN  S RG+E+ID  K  +E ACPR VSCADI+T+A   SVAL+GGP ++VP GRRD   +N    + NLPGP   +      F   G+N    +  + G H+ G A C  F+ RL         D  ++ +    LR+ C    +       D  T    DN  +  +R ++G+L+ DQ L    G D  T+ IV  +  +   F K
Sbjct:   71 ASLLIDPRPGRPSEKSTGPNA-SVRGYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVALAGGPRFSVPTGRRDGLRSNP--NDVNLPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVGVAHCSLFQDRL--------SDRAMEPSLKSSLRRKCSSPNDPTTF--LDQKTSFTVDNAIYGEIRRQRGILRIDQNL----GLDRSTSGIVSGYASSNTLFRK 279          
The following BLAST results are available for this feature:
BLAST of CX290142 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
PER31_ARATH1.569e-3038.05Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER24_ARATH5.961e-3039.39Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER41_ARATH1.017e-2938.33Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER1_SOLLC5.047e-2941.96Suberization-associated anionic peroxidase 1 OS=So... [more]
PERX_SOLTU4.272e-2840.54Suberization-associated anionic peroxidase OS=Sola... [more]
PER8_ARATH1.623e-2734.68Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER6_ARATH2.769e-2736.00Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PER2_SOLLC2.769e-2739.29Suberization-associated anionic peroxidase 2 OS=So... [more]
PER18_ARATH6.169e-2737.33Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER44_ARATH1.795e-2635.40Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC02020H11SK IF1 Citrus clementina cDNA clone C02020H11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290142 ID=CX290142; Name=CX290142; organism=Citrus clementina; type=EST; length=687bp
AGGCATCGATCTTGCTGGACAGCACTAACACCATAGACAGCGAGAAATTT
GCTGCGCCAAATAACAATTCGGCGAGGGGTTTTGAAGTTATTGATAACAT
GAAAGCTGCCGTTGAAAGGGCATGTCCAAGGGTTGTTTCCTGCGCTGATA
TTCTTACTATTGCGGCTGAACGATCCGTTGCTTTGTCAGGGGGTCCGTCA
TGGGCAGTTCCATTGGGAAGAAGAGACAGCAGAACGGCAAACAGAGCTCT
TGCAAATCAGAATCTTCCAGGACCATTTGATACTCTTGATGAGCTCAAAT
CTAGTTTTAGAAATGTTGGCCTCAATGACAAGCTTGATCTTGTTGCACTC
TCCGGAGCACACACGTTCGGAAGGGCTCAGTGCCAATTTTTCAGGGGCAG
ATTATACGATTTTAACAACACTGGCAAGCCAGACCCAACCCTAGACGCAA
CCTTCTTACAACAACTGAGGAAACTATGCCCACAAGGTGGAAACGGCGGC
GTTCTTGCTAATTTTGATGTCACGACACCTGATGTTTTCGACAACAAATA
CTTCTCCAATCTTAGAGGCCGCAAAGGCCTTCTGCAGAGTGATCAAGAGT
TGTTTTCGACTCCTGGTGCCGATACCGCTGCCATTGTCGAGGACTTTGGG
AGGAACCAGAAATGCTTCTTTAAAACTTTGTGACCTC
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