CX290144

Overview
NameCX290144
Unique NameCX290144
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: ADT3_PIG (ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 3.643e-12
Identity = 53/199 (26.63%), Postives = 85/199 (42.71%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYR--YRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDIL 591
            G  AG  ++   YP+D  R RL     KS     ++G+   L  + + +G R LY+G+  SV G++ Y    F VY + K  L   +   +     ++ T                 YP D +RRRM M             GR  A + Y G +D +RK  + EG  A +KG   N ++ +   +   V Y+ +K ++
Sbjct:  120 GGAAGATSLCFVYPLDFARTRLAADVGKSATEREFKGLGDCLVKITKSDGIRGLYQGFNVSVQGIIIYRAAYFGVYGTAKGMLPDPRNTHIVVSWMIAQTV--------TAVAGVFSYPFDTVRRRMMM-----------QSGRKGADIMYKGTLDCWRKIFKDEGGKAFFKGAWSNVLRGMGG-AFVLVLYDELKKVI 298          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: ADT2_HUMAN (ADP/ATP translocase 2 OS=Homo sapiens GN=SLC25A5 PE=1 SV=6)

HSP 1 Score: 72.0182 bits (175), Expect = 3.643e-12
Identity = 52/196 (26.53%), Postives = 83/196 (42.35%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKS--PYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVK 582
            G  AG  ++   YP+D  R RL     K+     +RG+   L  + + +G + LY+G+  SV G++ Y    F +Y++ K  L   K   +     ++ T                 YP D +RRRM M             GR    + Y G +D +RK  R EG  A +KG   N ++ +   +   V Y+ +K
Sbjct:  120 GGAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIKGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPKNTHIVISWMIAQTV--------TAVAGLTSYPFDTVRRRMMM-----------QSGRKGTDIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGG-AFVLVLYDEIK 295          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: ADT2_BOVIN (ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=2 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 4.757e-12
Identity = 52/196 (26.53%), Postives = 85/196 (43.37%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKS--PYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVK 582
            G  AG  ++   YP+D  R RL     K+     +RG+   L  + + +G R LY+G+  SV G++ Y    F +Y++ K  L   K      ++ + ++  +              YP D +RRRM M             GR    + Y G +D +RK  R EG  A +KG   N ++ +   +   V Y+ +K
Sbjct:  120 GGAAGATSLCFVYPLDFARTRLAADVGKAGAEREFRGLGDCLVKIYKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPK------NTHIFISWMI--AQSVTAVAGLTSYPFDTVRRRMMM-----------QSGRKGTDIMYTGTLDCWRKIARDEGAKAFFKGAWSNVLRGMGG-AFVLVLYDEIK 295          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: MCFS_DICDI (Mitochondrial substrate carrier family protein S OS=Dictyostelium discoideum GN=mcfS PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.213e-12
Identity = 52/198 (26.26%), Postives = 89/198 (44.95%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDILG 594
            G  AG+ A     P+++V+ RL VQT   P +Y+G    L  +L+E G R  YRG+ P++          F+ YE+ K +  K K     +D EL++   +              YP+DV + ++Q           I +G   +P     ++   ++    EG   L++G  P  ++  P+ +  F  YE+V  +LG
Sbjct:  105 GGFAGVGASVVLTPVELVKCRLQVQTT-GPQKYKGSLDCLVQILKEGGIRGAYRGFTPTIAREFVGNMAFFSTYETCKRY-FKNKENKPNDDDELNLPALIISGGLGGMAYWTVLYPVDVAKSKIQ-----------ISEGAGPSP----SIVKVLKEIYSKEGVKGLFRGYTPTIIRSFPANAAMFSVYELVIKLLG 285          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: ADT1_HUMAN (ADP/ATP translocase 1 OS=Homo sapiens GN=SLC25A4 PE=1 SV=4)

HSP 1 Score: 71.2478 bits (173), Expect = 6.213e-12
Identity = 50/196 (25.51%), Postives = 81/196 (41.33%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYR--YRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVK 582
            G  AG  ++   YP+D  R RL     K   +  + G+   +  + + +G R LY+G+  SV G++ Y    F VY++ K          L +   + +                  YP D +RRRM M             GR  A + Y G +D +RK  + EG  A +KG   N ++ +   +   V Y+ +K
Sbjct:  120 GGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFHGLGDCIIKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGM--------LPDPKNVHIFVSWMIAQSVTAVAGLVSYPFDTVRRRMMM-----------QSGRKGADIMYTGTVDCWRKIAKDEGAKAFFKGAWSNVLRGMGG-AFVLVLYDEIK 295          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: YIKC_SCHPO (Uncharacterized mitochondrial carrier PB17E12.12c OS=Schizosaccharomyces pombe GN=SPAPB17E12.12c PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.115e-12
Identity = 55/213 (25.82%), Postives = 91/213 (42.72%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLR----------------EEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDIL 591
            GA AG  + + TYP+D+ R RL+++T     R   I +  +  L+                E G  ALY G   +++ VVPYV + F  +E  K             +++L+   +L              +P DV+RRR Q+       + + G G N     Y  +  A     + EG    ++G   N +K++P +S+ + TYE V  +L
Sbjct:  122 GAIAGAASCATTYPLDIARTRLSIETAGLTSRSLAINNVANNSLKVKPLTLWSTLLYIVQHEGGYPALYNGLPATLLNVVPYVSICFFTFEFCKQKFFS--------NADLTAFQKLFLGGFTGIIGQTLTFPADVLRRRFQV-------NRIPGIGHN-----YKNIKSAIFHIYKTEGINGFFRGYSSNMLKIIPVMSITWYTYETVSKML 314          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: S2536_CHICK (Solute carrier family 25 member 36 OS=Gallus gallus GN=SLC25A36 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.115e-12
Identity = 51/200 (25.50%), Postives = 85/200 (42.50%), Query Frame = 1
Query:   10 AGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTR------LXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDIL 591
            AG  A++ T P+ +V+ RL +       +    F  +  V R +G +  YRG   S  G+   V ++F +YES+K  L++ K     +  + S          +              YP +V+R R++  G K                 Y          VR EG+G+LY+GL  + V+ +P+ ++   TYEVV  +L
Sbjct:  130 AGFTAITMTNPIWLVKTRLQLDARNRGEKRMSAFECVRKVYRSDGIKGFYRGMSASYAGISETV-IHFVIYESIKRKLLEHKTASAMDSEDESAKEASDFVGMMMAAATSKTCATSIAYPHEVVRTRLREEGTK-----------------YRSFFQTLSLLVREEGYGSLYRGLTTHLVRQIPNTAIMMSTYEVVVYLL 311          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: KMCP1_MOUSE (Kidney mitochondrial carrier protein 1 OS=Mus musculus GN=Slc25a30 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.060e-11
Identity = 53/199 (26.63%), Postives = 86/199 (43.22%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKSP-----YRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVK 582
            G  A I A   T+P+D+ + RL +Q + +       RYRG+ HAL  + REEG +ALY G  P+++    Y  +    Y+SL       K L +    + ++   +               P DV++ RMQ       +S V G           GMID+F    + EG   L+KG+   + +    + +    Y++ K
Sbjct:   12 GGLASITAECGTFPIDLTKTRLQIQGQTNDANFREIRYRGMLHALMRIGREEGLKALYSGIAPAMLRQASYGTIKIGTYQSL-------KRLAVERPEDETLLVNVVCGILSGVISSAIANPTDVLKIRMQ-----AQNSAVQG-----------GMIDSFMSIYQQEGTRGLWKGVSLTAQRAAIVVGVELPVYDITK 187          

HSP 2 Score: 68.1662 bits (165), Expect = 5.260e-11
Identity = 54/196 (27.55%), Postives = 90/196 (45.92%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDI 588
            G  +G+I+ +   P D+++ R+  Q         G+  +  ++ ++EG R L++G   +       VG+   VY+  K  LI +   GL  D+   V T                 P+DV+R RM        +   + DGR      Y G +D   +T ++EGF ALYKG  PN +++ P   + F+TYE +K +
Sbjct:  113 GILSGVISSAIANPTDVLKIRMQAQNSAVQ---GGMIDSFMSIYQQEGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHLILS---GLMGDT---VATHFLSSFTCGLVGALASNPVDVVRTRMM-------NQRALRDGRCAG---YKGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFLTYEQLKKL 289          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: ADT2_TACAC (ADP/ATP translocase 2 OS=Tachyglossus aculeatus aculeatus GN=SLC25A5 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.060e-11
Identity = 51/196 (26.02%), Postives = 86/196 (43.88%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKS--PYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVK 582
            G  AG  ++   YP+D  R RL     K+     ++G+   L  + + +G R LY+G+  SV G++ Y    F +Y++ K  L   K      ++ + ++  +              YP D +RRRM M             GR  + + Y G ID ++K  R EG  A +KG   N ++ +   +   V Y+ +K
Sbjct:  120 GGAAGATSLCFVYPLDFARTRLAADVGKAGDAREFKGLGDCLVKITKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPK------NTHIFISWMI--AQSVTAVAGLTSYPFDTVRRRMMM-----------QSGRKGSDIMYTGTIDCWKKIARDEGSKAFFKGAWSNVLRGMGG-AFVLVLYDEIK 295          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: SFC1_YEAST (Succinate/fumarate mitochondrial transporter OS=Saccharomyces cerevisiae GN=SFC1 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.808e-11
Identity = 60/203 (29.56%), Postives = 90/203 (44.33%), Query Frame = 1
Query:    1 GACAGII-AMSATYPMDMVRGRLTVQ--TEKSPY---RYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDIL 591
            G  AGI  A+    PM++V+ RL  Q  T   P    +Y    HA  T+++EEG  ALYRG   +        G NF VY  LK +L     + +    E S    +               PLD I+ R+Q     ++ S+    G  +       +I    + ++ EGF ALYKG+ P  ++V P  ++ F  YE V++ L
Sbjct:  117 GVGAGITEAVLVVNPMEVVKIRLQAQHLTPSEPNAGPKYNNAIHAAYTIVKEEGVSALYRGVSLTAARQATNQGANFTVYSKLKEFLQNYHQMDVLPSWETSCIGLISGAIGPFSNA-----PLDTIKTRLQK---DKSISLEKQSGMKK-------IITIGAQLLKEEGFRALYKGITPRVMRVAPGQAVTFTVYEYVREHL 304          
The following BLAST results are available for this feature:
BLAST of CX290144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
ADT3_PIG3.643e-1226.63ADP/ATP translocase 3 OS=Sus scrofa GN=SLC25A6 PE=... [more]
ADT2_HUMAN3.643e-1226.53ADP/ATP translocase 2 OS=Homo sapiens GN=SLC25A5 P... [more]
ADT2_BOVIN4.757e-1226.53ADP/ATP translocase 2 OS=Bos taurus GN=SLC25A5 PE=... [more]
MCFS_DICDI6.213e-1226.26Mitochondrial substrate carrier family protein S O... [more]
ADT1_HUMAN6.213e-1225.51ADP/ATP translocase 1 OS=Homo sapiens GN=SLC25A4 P... [more]
YIKC_SCHPO8.115e-1225.82Uncharacterized mitochondrial carrier PB17E12.12c ... [more]
S2536_CHICK8.115e-1225.50Solute carrier family 25 member 36 OS=Gallus gallu... [more]
KMCP1_MOUSE1.060e-1126.63Kidney mitochondrial carrier protein 1 OS=Mus musc... [more]
ADT2_TACAC1.060e-1126.02ADP/ATP translocase 2 OS=Tachyglossus aculeatus ac... [more]
SFC1_YEAST1.808e-1129.56Succinate/fumarate mitochondrial transporter OS=Sa... [more]

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Properties
Property NameValue
Genbank descriptionC02021A02SK IF1 Citrus clementina cDNA clone C02021A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290144 ID=CX290144; Name=CX290144; organism=Citrus clementina; type=EST; length=727bp
GGAGCATGTGCTGGAATAATTGCCATGTCTGCCACTTACCCCATGGATAT
GGTACGGGGGAGGCTAACTGTTCAGACAGAAAAGTCTCCATACCGGTACA
GGGGAATCTTCCATGCTCTTTCAACTGTGCTGCGGGAAGAAGGCCCACGG
GCTTTGTACAGGGGCTGGTTTCCTTCAGTAATTGGAGTTGTCCCCTACGT
GGGTCTCAACTTTGCTGTGTATGAATCTTTAAAAGTTTGGTTAATCAAAA
CTAAGCCCCTTGGGTTAGCTGAAGATTCTGAGTTGAGTGTGACGACAAGA
CTAGCGTGTGGAGCTGCTGCAGGAACAGTTGGCCAAACTGTTGCCTACCC
TCTTGATGTTATACGCCGAAGAATGCAGATGGTGGGTTGGAAAGAAGCTT
CCTCTGTGGTCATTGGTGATGGGAGAAACAGAGCTCCTCTTGAATATAAT
GGCATGATTGATGCATTCCGAAAAACTGTCCGGCACGAGGGGTTTGGAGC
ATTATACAAGGGCTTGGTTCCCAATTCTGTGAAGGTTGTTCCATCCATAT
CACTAGCATTTGTGACTTATGAGGTGGTGAAGGACATTTTAGGAGTTGAA
ATTAGAATATCAGACTGAAGTTTGTGGAACTTTGACATTTGTTGGACAGA
GGTGTTATTTTTGTAGGGAAGGGGTTAGGGAAAAGGTAAAGTAGGCATTC
TTGCCTTTTGTCTTTCTAAGGTCAAGT
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