CX290144

Overview
NameCX290144
Unique NameCX290144
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: MCFV_DICDI (Mitochondrial substrate carrier family protein V OS=Dictyostelium discoideum GN=mcfV PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.808e-11
Identity = 38/103 (36.89%), Postives = 59/103 (57.28%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQ----TEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTT 297
            GA AG+ +   TYP+D+VR RL++Q     + + +RY GI H+   + ++EG + LY+G   S+  +VP+V ++FA YE  K+   K         S LS TT
Sbjct:  262 GAMAGLTSTFFTYPLDVVRIRLSLQGSCSNDYAAHRYNGITHSFFKIHKDEGVKGLYKGLGTSIASIVPWVSISFATYEGFKIICKKMILNYQISSSSLSTTT 364          

HSP 2 Score: 68.1662 bits (165), Expect = 5.260e-11
Identity = 56/216 (25.93%), Postives = 92/216 (42.59%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQ--TEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKP----------------LGLAEDSELSVTT--RLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDI 588
            G+ AG I+ SAT   + +     VQ  ++     Y G   A+  +++ EG +++++G   +++ V P  G+ F  YE  K   +                    +G    SE+ +T    +              YPLDV+R R+ + G             + A   YNG+  +F K  + EG   LYKGL  +   +VP +S++F TYE  K I
Sbjct:  139 GSIAGAISRSATAGFERLTIIQQVQGMSQNLSQGYVGCIAAMKEMVKREGFKSIWKGNGANIVKVSPNSGIRFLTYEFCKKHFLDNSSNHPSSSSIENGIDGNGVGCGSGSEMKMTVPQTMFSGAMAGLTSTFFTYPLDVVRIRLSLQG---------SCSNDYAAHRYNGITHSFFKIHKDEGVKGLYKGLGTSIASIVPWVSISFATYEGFKII 345          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: ADT2_ANOGA (ADP,ATP carrier protein 2 OS=Anopheles gambiae GN=AGAP002358 PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.808e-11
Identity = 53/201 (26.37%), Postives = 85/201 (42.29%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPY--RYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWL--IKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDIL 591
            G  AG  ++   YP+D  R RL     K      ++G+   +S + + +G   LYRG+  SV G++ Y    F  Y++ +  L   KT P  ++      VTT                YP D +RRRM M             GR ++ + Y G +  +    + EG GA +KG   N ++     +   V Y+ +K +L
Sbjct:  122 GGMAGATSLCFVYPLDFARTRLAADVGKGAEAREFKGLGDCISKIFKTDGLVGLYRGFGVSVQGIIIYRAAYFGFYDTARGMLPNPKTTPWYVSWAIAQCVTT----------VAGIVSYPFDTVRRRMMM-----------QSGRAKSEIVYKGTLHCWATIAKQEGTGAFFKGAFSNVLRGTGG-AFVLVLYDEIKKVL 300          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: ADT2_MOUSE (ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 2.361e-11
Identity = 50/196 (25.51%), Postives = 85/196 (43.37%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKS--PYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVK 582
            G  AG  ++   YP+D  R RL     K+     ++G+   L  + + +G + LY+G+  SV G++ Y    F +Y++ K  L   K      ++ + ++  +              YP D +RRRM M             GR    + Y G +D +RK  R EG  A +KG   N ++ +   +   V Y+ +K
Sbjct:  120 GGAAGATSLCFVYPLDFARTRLAADVGKAGAEREFKGLGDCLVKIYKSDGIKGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPK------NTHIFISWMI--AQSVTAVAGLTSYPFDTVRRRMMM-----------QSGRKGTDIMYTGTLDCWRKIARDEGSKAFFKGAWSNVLRGMGG-AFVLVLYDEIK 295          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: KMCP1_MACFA (Kidney mitochondrial carrier protein 1 OS=Macaca fascicularis GN=SLC25A30 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.084e-11
Identity = 56/196 (28.57%), Postives = 90/196 (45.92%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDI 588
            G  +G+I+ +   P D+++ R+  Q+        G+      + ++EG R L++G   +       VG+   VY+  K  LI +   GL  D+   V T                 P+DV+R RM        +  V+ DGR      Y G +D   +T ++EGF ALYKG  PN +++ P   + FVTYE +K +
Sbjct:  113 GILSGVISSTIANPTDVLKIRMQAQSSTIQ---GGMIGNFMNIYQQEGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHLILS---GLMGDT---VYTHFLSSFTCGLAGALASNPVDVVRTRMM-------NQRVLQDGRCSG---YTGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIILFVTYEQLKKL 289          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: ADT_CHLRE (ADP,ATP carrier protein OS=Chlamydomonas reinhardtii GN=ABT PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.084e-11
Identity = 48/185 (25.95%), Postives = 79/185 (42.70%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPY-----RYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVV 540
            G  AG +++S  Y +D  R RL    + +       ++ G+       +  +G   LYRG+  S +G+V Y GL F +Y+SLK       P+ L      +                   YP+D IRRRM M               + + ++YN     F++ V++EG  +L+KG   N ++ V
Sbjct:  119 GGAAGAVSLSFVYSLDYARTRLANDAKSAKKGGGDRQFNGLVDVYRKTIASDGIAGLYRGFNISCVGIVVYRGLYFGMYDSLK-------PVVLVGPLANNFLAAFLLGWGITIGAGLASYPIDTIRRRMMMT--------------SGSAVKYNSSFHCFQEIVKNEGMKSLFKGAGANILRAV 282          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: ADT2_RAT (ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc25a5 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 3.084e-11
Identity = 50/196 (25.51%), Postives = 85/196 (43.37%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKS--PYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVK 582
            G  AG  ++   YP+D  R RL     K+     ++G+   L  + + +G + LY+G+  SV G++ Y    F +Y++ K  L   K      ++ + ++  +              YP D +RRRM M             GR    + Y G +D +RK  R EG  A +KG   N ++ +   +   V Y+ +K
Sbjct:  120 GGAAGATSLCFVYPLDFARTRLAADVGKAGAEREFKGLGDCLVKIYKSDGIKGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPK------NTHIFISWMI--AQSVTAVAGLTSYPFDTVRRRMMM-----------QSGRKGTDIMYTGTLDCWRKIARDEGGKAFFKGAWSNVLRGMGG-AFVLVLYDEIK 295          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: ADT1_SOLTU (ADP,ATP carrier protein, mitochondrial OS=Solanum tuberosum GN=ANT PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.084e-11
Identity = 49/184 (26.63%), Postives = 80/184 (43.48%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPY----RYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVV 540
            G  AG  ++   Y +D  R RL    + S      ++ G+       L+ +G   LYRG+  S +G++ Y GL F +Y+SL       KP+ L  + + S                   YP+D +RRRM M   +               ++Y   +DAF + V++EG  +L+KG   N ++ V
Sbjct:  198 GGAAGASSLFFVYSLDYARTRLANDRKASKKGGERQFNGLVDVYKKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSL-------KPVLLTGNLQDSFFASFGLGWLITNGAGLASYPIDTVRRRMMMTSGE--------------AVKYKSSLDAFSQIVKNEGPKSLFKGAGANILRAV 360          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: S2541_BOVIN (Solute carrier family 25 member 41 OS=Bos taurus GN=SLC25A41 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.027e-11
Identity = 41/134 (30.60%), Postives = 70/134 (52.24%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKT-----KPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVG 387
            G+ A   + +   PM++++ RLT++      +Y+G+      +L +EG RALYRG+ P+++G++PY   + AVYE L    +K+      P GL   S ++++T                YPL ++R RMQ  G
Sbjct:  191 GSLAVATSQTLINPMEVLKTRLTLRRTG---QYKGLLDCARQILEQEGTRALYRGYLPNMLGIIPYACTDLAVYEMLNCLWLKSGRDMKDPSGLVSLSSVTLST---------TCGQMASYPLTLVRTRMQAQG 312          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: MCFR_DICDI (Mitochondrial substrate carrier family protein R OS=Dictyostelium discoideum GN=mcfR PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.027e-11
Identity = 53/192 (27.60%), Postives = 92/192 (47.92%), Query Frame = 1
Query:   28 SATYPMDMVRGRL-TVQTEKS----PYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLA-EDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKD 585
            S+T P  +++  +  V  EKS     Y+ +G+F            + ++RG  P++ G +PY G+ ++ +E  K    +  P     E  ++    +L              YPLDV+RRR+Q  G+        GDG+    L+++ +   F    + EG  AL+KG+  N +KV+P+  +AF+TYE + D
Sbjct:  151 SSTQPPKVLKNGIGAVNIEKSIDFNGYKTKGLF------------KGIWRGILPTLYGSIPYAGVGYSSFEYFK----RIAPDSFRNEKGDVIGIYKLISGGVAGGLGQTAAYPLDVVRRRIQTTGY--------GDGKGVENLKHSTLKTMFT-IFQKEGIYALFKGISINYIKVIPTNGVAFLTYETLCD 317          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: KMCP1_HUMAN (Kidney mitochondrial carrier protein 1 OS=Homo sapiens GN=SLC25A30 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.027e-11
Identity = 56/196 (28.57%), Postives = 90/196 (45.92%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDI 588
            G  +G+I+ +   P D+++ R+  Q+        G+      + ++EG R L++G   +       VG+   VY+  K  LI +   GL  D+   V T                 P+DV+R RM        +  V+ DGR      Y G +D   +T ++EGF ALYKG  PN +++ P   + FVTYE +K +
Sbjct:  113 GILSGVISSTIANPTDVLKIRMQAQSNTIQ---GGMIGNFMNIYQQEGTRGLWKGVSLTAQRAAIVVGVELPVYDITKKHLILS---GLMGDT---VYTHFLSSFTCGLAGALASNPVDVVRTRMM-------NQRVLRDGRCSG---YTGTLDCLLQTWKNEGFFALYKGFWPNWLRLGPWNIIFFVTYEQLKKL 289          
The following BLAST results are available for this feature:
BLAST of CX290144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
MCFV_DICDI1.808e-1136.89Mitochondrial substrate carrier family protein V O... [more]
ADT2_ANOGA1.808e-1126.37ADP,ATP carrier protein 2 OS=Anopheles gambiae GN=... [more]
ADT2_MOUSE2.361e-1125.51ADP/ATP translocase 2 OS=Mus musculus GN=Slc25a5 P... [more]
KMCP1_MACFA3.084e-1128.57Kidney mitochondrial carrier protein 1 OS=Macaca f... [more]
ADT_CHLRE3.084e-1125.95ADP,ATP carrier protein OS=Chlamydomonas reinhardt... [more]
ADT2_RAT3.084e-1125.51ADP/ATP translocase 2 OS=Rattus norvegicus GN=Slc2... [more]
ADT1_SOLTU3.084e-1126.63ADP,ATP carrier protein, mitochondrial OS=Solanum ... [more]
S2541_BOVIN4.027e-1130.60Solute carrier family 25 member 41 OS=Bos taurus G... [more]
MCFR_DICDI4.027e-1127.60Mitochondrial substrate carrier family protein R O... [more]
KMCP1_HUMAN4.027e-1128.57Kidney mitochondrial carrier protein 1 OS=Homo sap... [more]

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Properties
Property NameValue
Genbank descriptionC02021A02SK IF1 Citrus clementina cDNA clone C02021A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290144 ID=CX290144; Name=CX290144; organism=Citrus clementina; type=EST; length=727bp
GGAGCATGTGCTGGAATAATTGCCATGTCTGCCACTTACCCCATGGATAT
GGTACGGGGGAGGCTAACTGTTCAGACAGAAAAGTCTCCATACCGGTACA
GGGGAATCTTCCATGCTCTTTCAACTGTGCTGCGGGAAGAAGGCCCACGG
GCTTTGTACAGGGGCTGGTTTCCTTCAGTAATTGGAGTTGTCCCCTACGT
GGGTCTCAACTTTGCTGTGTATGAATCTTTAAAAGTTTGGTTAATCAAAA
CTAAGCCCCTTGGGTTAGCTGAAGATTCTGAGTTGAGTGTGACGACAAGA
CTAGCGTGTGGAGCTGCTGCAGGAACAGTTGGCCAAACTGTTGCCTACCC
TCTTGATGTTATACGCCGAAGAATGCAGATGGTGGGTTGGAAAGAAGCTT
CCTCTGTGGTCATTGGTGATGGGAGAAACAGAGCTCCTCTTGAATATAAT
GGCATGATTGATGCATTCCGAAAAACTGTCCGGCACGAGGGGTTTGGAGC
ATTATACAAGGGCTTGGTTCCCAATTCTGTGAAGGTTGTTCCATCCATAT
CACTAGCATTTGTGACTTATGAGGTGGTGAAGGACATTTTAGGAGTTGAA
ATTAGAATATCAGACTGAAGTTTGTGGAACTTTGACATTTGTTGGACAGA
GGTGTTATTTTTGTAGGGAAGGGGTTAGGGAAAAGGTAAAGTAGGCATTC
TTGCCTTTTGTCTTTCTAAGGTCAAGT
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