CX290144
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: SCMC1_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Mus musculus GN=Slc25a24 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.973e-22 Identity = 67/200 (33.50%), Postives = 105/200 (52.50%), Query Frame = 1 Query: 1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDS-ELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDILGV 597 G+ AG A + YPM++++ RL V +Y GI+ +L+ EG A Y+G+ P+++G++PY G++ AVYE LK + + A+DS V L YPL ++R RMQ A + V G AP M+ F++ V EG LY+G+ PN +KV+P++ +++V YE +K LGV Sbjct: 293 GSMAGATAQTFIYPMEVLKTRLAVAKTG---QYSGIYGCAKKILKHEGFGAFYKGYIPNLLGIIPYAGIDLAVYELLKSYWLD----NFAKDSVNPGVMVLLSCGALSSTCGQLASYPLALVRTRMQ------AQATVEG-----AP--QLSMVGLFQRIVSKEGVSGLYRGITPNFMKVLPAVGISYVVYENMKQTLGV 472 HSP 2 Score: 78.5666 bits (192), Expect = 3.892e-14 Identity = 52/194 (26.80%), Postives = 88/194 (45.36%), Query Frame = 1 Query: 1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVK 582 G AG ++ ++T P+D ++ + V KS IF +++E G R+L+RG +VI + P + F YE K L + E +L R YP++V++ R+ V G +Y+G+ +K ++HEGFGA YKG +PN + ++P + YE++K Sbjct: 201 GGVAGAVSRTSTAPLDRLKVMMQVHGSKS----MNIFGGFRQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTE-------EGQKLGTFERFISGSMAGATAQTFIYPMEVLKTRL----------AVAKTG------QYSGIYGCAKKILKHEGFGAFYKGYIPNLLGIIPYAGIDLAVYELLK 367
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: SCMC1_BOVIN (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Bos taurus GN=SLC25A24 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.883e-22 Identity = 66/201 (32.84%), Postives = 102/201 (50.75%), Query Frame = 1 Query: 1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKV-WLIKTKPLGLAEDS-ELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDILGV 597 G+ AG A + YPM++++ RL V +Y G+F +L+ EG A Y+G+ P+++G++PY G++ AVYE LK WL A+DS V L YPL ++R RMQ E S + M+ FR+ + EG LY+G+ PN +KV+P++ +++V YE +K LGV Sbjct: 295 GSMAGATAQTFIYPMEVLKTRLAVGKTG---QYSGMFDCAKKILKYEGMGAFYKGYVPNLLGIIPYAGIDLAVYELLKSHWLD-----NFAKDSVNPGVMVLLGCGALSSTCGQLASYPLALVRTRMQAQAMIEKSPQL-------------NMVGLFRRILSKEGLPGLYRGITPNFMKVLPAVGISYVVYENMKQTLGV 474 HSP 2 Score: 77.0258 bits (188), Expect = 1.132e-13 Identity = 50/194 (25.77%), Postives = 89/194 (45.88%), Query Frame = 1 Query: 1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVK 582 G AG ++ ++T P+D ++ + V KS I+ +++E G R+L+RG +VI + P + F YE K L + E ++ R YP++V++ R+ + G+ +Y+GM D +K +++EG GA YKG VPN + ++P + YE++K Sbjct: 201 GGVAGAVSRTSTAPLDRLKVMMQVHGSKSAKM--NIYGGFQQMVKEGGIRSLWRGNGTNVIKIAPETAVKFWAYEQYKKLLTE-------EGQKIGTFERFVSGSMAGATAQTFIYPMEVLKTRLAV-------------GKTG---QYSGMFDCAKKILKYEGMGAFYKGYVPNLLGIIPYAGIDLAVYELLK 369
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: CMC3_CAEBR (Probable calcium-binding mitochondrial carrier CBG00135 OS=Caenorhabditis briggsae GN=CBG00135 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.883e-22 Identity = 61/198 (30.81%), Postives = 107/198 (54.04%), Query Frame = 1 Query: 1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDILG 594 G+ AG I+ +A YPM++++ RL ++ ++ RG+ H + +EG R Y+G+ P+++G++PY G++ VYE+LK + E +E V L YPL ++R R+Q + I + P + MI F+ +++EGF LY+G+ PN +KV+P++S+++V YE V+ LG Sbjct: 348 GSSAGAISQTAIYPMEVMKTRLALR--RTGQLDRGMIHFAHKMYDKEGIRCFYKGYLPNLLGIIPYAGIDLTVYETLKSCYTQY----YTEHTEPGVLALLACGTCSSTCGQLASYPLALVRTRLQ--------ARAISPKNSSQP---DTMIGQFKHILQNEGFTGLYRGITPNFMKVIPAVSISYVVYEKVRKQLG 528
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: CMC2_CAEEL (Putative calcium-binding mitochondrial carrier F55A11.4 OS=Caenorhabditis elegans GN=F55A11.4 PE=5 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.883e-22 Identity = 62/201 (30.85%), Postives = 106/201 (52.74%), Query Frame = 1 Query: 1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDILGVEI 603 G+ AG I+ S YPM++++ RL ++ K+ RGI H + +EG R Y+G+ P++IG++PY G++ A+YE+LK ++ SE V L YP ++R R+Q A S+ R + + M F+ +++EG Y+G+ PN +KV+P++S+++V YE V+ LGV + Sbjct: 351 GSAAGAISQSTIYPMEVMKTRLALR--KTGQLDRGIIHFAHKMYTKEGIRCFYKGYLPNLIGIIPYAGIDLAIYETLKRTYVRYYE---TNSSEPGVLALLACGTCSSTCGQLSSYPFALVRTRLQ------ALSI------TRYSPQPDTMFGQFKYILQNEGVTGFYRGITPNFLKVIPAVSISYVVYEKVRTGLGVPV 534
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: TAAC_ARATH (Thylakoid ADP,ATP carrier protein, chloroplastic OS=Arabidopsis thaliana GN=TAAC PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.071e-22 Identity = 62/197 (31.47%), Postives = 101/197 (51.27%), Query Frame = 1 Query: 1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDIL 591 GACAG+ + TYP+D++R RL V+ YR + +LREEG + Y G PS++ + PY+ +NF V++ +K K+ P + ++ S+ T + YPLD IRR+MQ+ G Y ++DAF + EG LY+G VPN++K +P+ S+ T+++VK ++ Sbjct: 222 GACAGMTSTLITYPLDVLRLRLAVEPG-----YRTMSQVALNMLREEGVASFYNGLGPSLLSIAPYIAINFCVFDLVK----KSLPEKYQQKTQSSLLTAVVAAAIATGTC----YPLDTIRRQMQLKG-----------------TPYKSVLDAFSGIIAREGVVGLYRGFVPNALKSMPNSSIKLTTFDIVKKLI 388 HSP 2 Score: 77.411 bits (189), Expect = 8.670e-14 Identity = 58/204 (28.43%), Postives = 93/204 (45.59%), Query Frame = 1 Query: 1 GACAGIIAMSATYPMDMVRGRLTVQT------EKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQM-VGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDIL 591 GA AG A S T P+D ++ L +QT ++S + G A++ + +EEG + ++G P VI +VPY + YE+ K L +D +LSV RL YPLDV+R R+ + G++ S V + +R EG + Y GL P+ + + P I++ F +++VK L Sbjct: 122 GAFAGAAAKSVTAPLDRIK--LLMQTHGVRAGQQSAKKAIGFIEAITLIGKEEGIKGYWKGNLPQVIRIVPYSAVQLFAYETY-------KKLFRGKDGQLSVLGRLGAGACAGMTSTLITYPLDVLRLRLAVEPGYRTMSQVAL-------------------NMLREEGVASFYNGLGPSLLSIAPYIAINFCVFDLVKKSL 297
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: SCMC1_RABIT (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Oryctolagus cuniculus GN=SLC25A24 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.071e-22 Identity = 65/201 (32.34%), Postives = 102/201 (50.75%), Query Frame = 1 Query: 1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKV-WLIKTKPLGLAEDS-ELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDILGV 597 G+ AG A + YPM++++ RL V +Y GI+ +L+ EG A Y+G+ P+++G++PY G++ AVYE LK WL A+DS V L YPL ++R RMQ E + + M+ FR+ + EG LY+G+ PN +KV+P++ +++V YE +K LGV Sbjct: 293 GSMAGATAQTFIYPMEVMKTRLAVGKTG---QYSGIYDCAKKILKYEGFGAFYKGYVPNLLGIIPYAGIDLAVYELLKSHWLD-----NFAKDSVNPGVLVLLGCGALSSTCGQLASYPLALVRTRMQAQAMLEGAPQL-------------NMVGLFRRIISKEGLPGLYRGITPNFMKVLPAVGISYVVYENMKQTLGV 472 HSP 2 Score: 80.4925 bits (197), Expect = 1.024e-14 Identity = 52/194 (26.80%), Postives = 91/194 (46.91%), Query Frame = 1 Query: 1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVK 582 G AG ++ ++T P+D ++ + V KS IF +++E G R+L+RG +VI + P + F VYE K L + E ++ R YP++V++ R+ + G+ +Y+G+ D +K +++EGFGA YKG VPN + ++P + YE++K Sbjct: 201 GGIAGAVSRTSTAPLDRLKVMMQVHGSKS----MNIFGGFRQMIKEGGVRSLWRGNGTNVIKIAPETAVKFWVYEQYKKLLTE-------EGQKIGTFERFISGSMAGATAQTFIYPMEVMKTRLAV-------------GKTG---QYSGIYDCAKKILKYEGFGAFYKGYVPNLLGIIPYAGIDLAVYELLK 367
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: S2542_XENTR (Solute carrier family 25 member 42 OS=Xenopus tropicalis GN=slc25a42 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.130e-21 Identity = 71/206 (34.47%), Postives = 103/206 (50.00%), Query Frame = 1 Query: 1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEG-FGALYKGLVPNSVKVVPSISLAFVTYEVVKDILGVEIRISD 615 GA AG A TYP+D+VR R+ V ++ Y I H + REEG ++LYRG+ P+V+GV+PY G++F YE+LK + + G + RL YPLDV+RRRMQ G V G Y +I ++ V EG LYKGL N VK ++ ++F T+++ + +L R+SD Sbjct: 141 GALAGTTATIITYPLDLVRARMAVTPKEM---YSNIIHVFMRMSREEGLKSLYRGFTPTVLGVIPYAGISFFTYETLK--KLHAEHSGRTQPYPFE---RLLFGACAGLFGQSASYPLDVVRRRMQTAG-------VTGHA-------YGSIIGTMQEIVAEEGVIRGLYKGLSMNWVKGPVAVGISFTTFDLTQILLKKLQRLSD 324 HSP 2 Score: 73.9442 bits (180), Expect = 9.586e-13 Identity = 54/200 (27.00%), Postives = 88/200 (44.00%), Query Frame = 1 Query: 1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGL---AEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLE-YNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDI 588 GA AG +A +A P+D R ++ Q + + + + + EG +L+RG +++ V+PY + F +E K K LG + S L+ RL YPLD++R RM + P E Y+ +I F + R EG +LY+G P + V+P ++F TYE +K + Sbjct: 43 GALAGAVAKTAVAPLD--RTKIIFQVSSNRFSAKEAYRLIYRTYLNEGFLSLWRGNSATMVRVIPYAAIQFCAHEQYK------KLLGSYYGFQGSALTPIPRLLAGALAGTTATIITYPLDLVRARMAV-----------------TPKEMYSNIIHVFMRMSREEGLKSLYRGFTPTVLGVIPYAGISFFTYETLKKL 217
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: S2542_XENLA (Solute carrier family 25 member 42 OS=Xenopus laevis GN=slc25a42 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.475e-21 Identity = 71/198 (35.86%), Postives = 101/198 (51.01%), Query Frame = 1 Query: 1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGF-GALYKGLVPNSVKVVPSISLAFVTYEVVKDIL 591 GA AG A TYP+D+VR R+ V T+K Y I H + REEG ++LYRG+ P+V+GV+PY G++F YE+LK + + G + RL YPLDV+RRRMQ G V G Y +I ++ V EGF LYKGL N VK ++ ++F T+++ + +L Sbjct: 141 GALAGTTATLLTYPLDLVRARMAV-TQKE--MYSNIIHVFMRMSREEGLKSLYRGFTPTVLGVIPYAGISFFTYETLK--KLHAEHSGRTQPYTFE---RLLFGACAGLFGQSSSYPLDVVRRRMQTAG-------VTGH-------TYGSIIGTMQEIVAEEGFIRGLYKGLSMNWVKGPVAVGISFTTFDLTQILL 316 HSP 2 Score: 73.1738 bits (178), Expect = 1.635e-12 Identity = 54/199 (27.14%), Postives = 88/199 (44.22%), Query Frame = 1 Query: 1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGL---AEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDI 588 GA AG +A +A P+D R ++ Q + + + + + +G +L+RG +++ V+PY + F +E K K LG + S L+ RL YPLD++R RM V KE Y+ +I F + R EG +LY+G P + V+P ++F TYE +K + Sbjct: 43 GALAGAVAKTAVAPLD--RTKIIFQVSSNRFSAKEAYRLIYRTYMNDGFLSLWRGNSATMVRVIPYAAIQFCAHEQYK------KLLGSYYGFQGSALTPIPRLLAGALAGTTATLLTYPLDLVRARM-AVTQKEM---------------YSNIIHVFMRMSREEGLKSLYRGFTPTVLGVIPYAGISFFTYETLKKL 217
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: S2542_RAT (Solute carrier family 25 member 42 OS=Rattus norvegicus GN=Slc25a42 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.927e-21 Identity = 69/198 (34.85%), Postives = 101/198 (51.01%), Query Frame = 1 Query: 1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEG-FGALYKGLVPNSVKVVPSISLAFVTYEVVKDIL 591 GA AG A S TYP+D+VR R+ V ++ Y IFH + REEG + LY G+ P+V+GV+PY GL+F YESLK + + G + R+ YPLDV+RRRMQ G V G ++ ++ R VR EG LYKGL N +K ++ ++F T+++++ +L Sbjct: 138 GALAGTTAASLTYPLDLVRARMAVTPKEM---YSNIFHVFIRISREEGLKTLYFGFTPTVLGVIPYAGLSFFTYESLKS--LHREYSGRPQPYPFE---RMVFGACAGLIGQSASYPLDVVRRRMQTAG-------VTGH-------QHGSILSTLRSIVREEGAVRGLYKGLSMNWLKGPIAVGISFTTFDLMQILL 313
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: S2542_MOUSE (Solute carrier family 25 member 42 OS=Mus musculus GN=Slc25a42 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.927e-21 Identity = 69/198 (34.85%), Postives = 101/198 (51.01%), Query Frame = 1 Query: 1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEG-FGALYKGLVPNSVKVVPSISLAFVTYEVVKDIL 591 GA AG A S TYP+D+VR R+ V ++ Y IFH + REEG + LY G+ P+V+GV+PY GL+F YESLK + + G + R+ YPLDV+RRRMQ G V G ++ ++ R VR EG LYKGL N +K ++ ++F T+++++ +L Sbjct: 138 GALAGTTAASLTYPLDLVRARMAVTPKEM---YSNIFHVFIRISREEGLKTLYFGFTPTVLGVIPYAGLSFFTYESLKS--LHREYSGRPQPYPFE---RMVFGACAGLIGQSASYPLDVVRRRMQTAG-------VTGH-------QHGSILSTLRSIVREEGAVRGLYKGLSMNWLKGPIAVGISFTTFDLMQILL 313 The following BLAST results are available for this feature:
BLAST of CX290144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 148
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290144 ID=CX290144; Name=CX290144; organism=Citrus clementina; type=EST; length=727bpback to top |