CX290144

Overview
NameCX290144
Unique NameCX290144
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: ADT_KLULA (ADP,ATP carrier protein OS=Kluyveromyces lactis GN=AAC PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.263e-16
Identity = 57/184 (30.98%), Postives = 82/184 (44.57%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPY----RYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVV 540
            G  AG +++   Y +D  R RL   ++ +      ++ G+       L  +G   LYRG+ PSV+G+V Y GL F +Y+SL       KPL L    E S                   YPLD +RRRM M   +               ++Y+G  DAFRK V  EG  +L+KG   N ++ V
Sbjct:  121 GGLAGGLSLLFVYSLDYARTRLAADSKSAKKGGERQFNGLVDVYKKTLASDGVAGLYRGFLPSVVGIVVYRGLYFGLYDSL-------KPLLLTGSLENSFLASFLLGWAVTTGASTASYPLDTVRRRMMMTSGQ--------------AVKYDGAFDAFRKIVAAEGIKSLFKGCGANILRGV 283          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: UCP3_CANFA (Mitochondrial uncoupling protein 3 OS=Canis familiaris GN=UCP3 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.580e-15
Identity = 57/200 (28.50%), Postives = 93/200 (46.50%), Query Frame = 1
Query:   10 AGIIAMSATYPMDMVRGRLTVQTEKSP------YRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDIL 591
            A   A   T+P+D  + RL +Q E          +YRG+   + T++R EGPR+ Y G    +   + +  +   +Y+S+K +     P G       S+TTR+               P DV++ R Q       +S+ +G G NR   +Y+G +DA+R   R EG   L+KG +PN  +         VTY+++K+ L
Sbjct:   23 AACFADLLTFPLDTAKVRLQIQGENQATQAARRIQYRGVLGTILTMVRTEGPRSPYNGLVAGLQRQMSFASIRIGLYDSVKQFYT---PKG---SDHSSITTRILAGCTTGAMAVSCAQPTDVVKVRFQ-------ASIHLGAGSNR---KYSGTMDAYRTIAREEGVRGLWKGTLPNITRNAIVNCAEMVTYDIIKEKL 206          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: UCP2_CYPCA (Mitochondrial uncoupling protein 2 OS=Cyprinus carpio GN=ucp2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.580e-15
Identity = 57/202 (28.22%), Postives = 90/202 (44.55%), Query Frame = 1
Query:   10 AGIIAMSATYPMDMVRGRLTVQTEKS--------PYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDIL 591
            A  IA   T+P+D  + RL +Q E          P +YRG+F  +ST++R EGPR+LY G    +   + +  +   +Y+S+K +  K           + + +RL               P DV++ R Q              G N+    Y+G +DA+R   + EGF  L+KG  PN  +         VTY+++KD L
Sbjct:   23 AACIADLFTFPLDTAKVRLQIQGESKIPVNTGHGPVKYRGVFGTISTMVRVEGPRSLYSGLVAGLQRQMSFASVRIGLYDSVKQFYTK-------GSEHVGIGSRLMAGCTTGAMAVALAQPTDVVKVRFQAQN---------SAGANK---RYHGTMDAYRTIAKEEGFRGLWKGTGPNITRNAIVNCTELVTYDLIKDAL 205          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: UCP3_PIG (Mitochondrial uncoupling protein 3 OS=Sus scrofa GN=UCP3 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.520e-15
Identity = 57/195 (29.23%), Postives = 90/195 (46.15%), Query Frame = 1
Query:   10 AGIIAMSATYPMDMVRGRLTVQTEKSPYR---YRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKD 585
            A   A   T+P+D  + RL +Q E    R   YRG+   + T++R EGPR+ Y G    +   + +  +   +Y+S+K       P G       S+TTR+               P DV++ R Q       +S+  G   NR   +Y+G +DA+R   R EG   L+KG++PN  +         VTY+V+K+
Sbjct:   23 AACFADLLTFPLDTAKVRLQIQGENQAARSAQYRGVLGTILTMVRNEGPRSPYNGLVAGLQRQMSFASIRIGLYDSVKQLYT---PKG---SDHSSITTRILAGCTTGAMAVTCAQPTDVVKVRFQ-------ASIHAGPRSNR---KYSGTMDAYRTIAREEGVRGLWKGILPNITRNAIVNCAEMVTYDVIKE 201          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: TPC1_ASPNC (Mitochondrial thiamine pyrophosphate carrier 1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=tpc1 PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.597e-15
Identity = 57/193 (29.53%), Postives = 96/193 (49.74%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQ-TEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAE-DSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYE 573
            GA AG +A ++TYP+D++R R   Q T++    Y  +  ++  + R EG    +RG   +V  +VPY+GL FA YE+L+  L + + L     D+   V   +              +PLD+IR+R+Q+ G      +      +R   EY G+ +  +  +R +G   LY+GL  +  K  P+ ++   TYE
Sbjct:  129 GATAGGLATASTYPLDLLRTRFAAQGTDRV---YTSLMSSVRDIARNEGYAGFFRGCSAAVGQIVPYMGLFFATYEALRPPLAQYQDLPFGSGDAAAGVIASV--------SSKTVMFPLDLIRKRLQVQGPTRQLYI------HRNIPEYQGVFNTMKLILRTQGIRGLYRGLTVSLFKAAPASAVTMWTYE 304          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: UCP2_DANRE (Mitochondrial uncoupling protein 2 OS=Danio rerio GN=ucp2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.841e-15
Identity = 57/202 (28.22%), Postives = 90/202 (44.55%), Query Frame = 1
Query:   10 AGIIAMSATYPMDMVRGRLTVQTE--------KSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDIL 591
            A  IA   T+P+D  + RL +Q E        + P +YRG+F  +ST++R EGPR+LY G    +   + +  +   +Y+S+K +  K             + +RL               P DV++ R Q       + V  G     A   Y+  +DA+R   + EGF  L+KG  PN  +         VTY+++KD L
Sbjct:   23 AACIADLFTFPLDTAKVRLQIQGENKASTNMGRGPVKYRGVFGTISTMVRVEGPRSLYSGLVAGLQRQMSFASVRIGLYDSVKQFYTK-------GSDHAGIGSRLMAGCTTGAMAVAVAQPTDVLKVRFQ-------AQVSAG-----ASKRYHSTMDAYRTIAKEEGFRGLWKGTGPNITRNAIVNCTELVTYDLIKDAL 205          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: ADT4_BOVIN (ADP/ATP translocase 4 OS=Bos taurus GN=SLC25A31 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.841e-15
Identity = 54/203 (26.60%), Postives = 86/203 (42.36%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPY--RYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDILGVEI 603
            G  AG  ++   YP+D  R RL     K P   +++G+   +  + + +G   LY+G+  SV G++ Y    F  Y+++K  L K K        E                     YP D +RRRM M                 A  +Y G +D F K  + EG GA ++G   N ++     +L  V Y+ +KD+L ++I
Sbjct:  136 GGAAGATSLCVVYPLDFARTRLGADIGKGPEERQFKGLGDCIMKIAKSDGIVGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPK--------ETHFLVSFFIAQVVTTCSGILSYPFDTVRRRMMMQS-------------GEAERQYKGTLDCFMKIYQQEGIGAFFRGAFSNILRGTGG-ALVLVLYDKIKDLLNIDI 316          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: UCP3_BOVIN (Mitochondrial uncoupling protein 3 OS=Bos taurus GN=UCP3 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14
Identity = 57/200 (28.50%), Postives = 93/200 (46.50%), Query Frame = 1
Query:   10 AGIIAMSATYPMDMVRGRLTVQTEKSPY------RYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDIL 591
            A   A   T+P+D  + RL +Q E          +YRG+   + T++R EGPR+LY G    +   + +  +   +Y+S+K +     P G       S+ TR+               P DV++ R Q       +S+  G G NR   +Y+G +DA+R   R EG   L+KG++PN  +         VTY+++K+ L
Sbjct:   23 AACFADLLTFPLDTAKVRLQIQGENQAALAARSAQYRGVLGTILTMVRTEGPRSLYSGLVAGLQRQMSFASIRIGLYDSVKQFY---TPKG---SDHSSIITRILAGCTTGAMAVTCAQPTDVVKIRFQ-------ASMHTGLGGNR---KYSGTMDAYRTIAREEGVRGLWKGILPNITRNAIVNCGEMVTYDIIKEKL 206          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: TPC1_AJECN (Mitochondrial thiamine pyrophosphate carrier 1 OS=Ajellomyces capsulata (strain NAm1 / WU24) GN=TPC1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.747e-14
Identity = 56/198 (28.28%), Postives = 95/198 (47.98%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTK-PLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDIL 591
            GA AG IA ++TYP+D++R R   Q     Y    +  ++  + R EGP   +RG   ++  +VPY+GL FA YE+L+  +   + P G  +     V + +              +PLD++R+R+Q+ G      +         P+ Y G+    R  +  +G   LY+GL  + +K  P+ ++   TYE V  +L
Sbjct:  128 GAVAGGIATTSTYPLDLLRTRFAAQGNDRIYASLRV--SVRDIARTEGPHGFFRGATAAIAQIVPYMGLFFAGYEALRSPIASLELPFGTGDAGAGVVASVI---------AKTGVFPLDLVRKRLQVQGPTRRRYI-----HTNIPV-YEGVYRTIRAILASQGPKGLYRGLTVSLIKAAPASAVTMWTYEHVLGLL 308          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: S2536_MOUSE (Solute carrier family 25 member 36 OS=Mus musculus GN=Slc25a36 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.980e-14
Identity = 54/202 (26.73%), Postives = 90/202 (44.55%), Query Frame = 1
Query:    4 ACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSV------TTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDIL 591
            A AG  A++AT P+ +++ RL +       +  G F  +  V + +G R  YRG   S  G+   V ++F +YES+K  L++ K   + E  E SV         +              YP +V+R R++  G K                 Y          V+ EG+G+LY+GL  + V+ +P+ ++   TYE+V  +L
Sbjct:  126 AMAGFTAITATNPIWLIKTRLQLDARTRGEKQMGAFECVRKVYQTDGLRGFYRGMSASYAGISETV-IHFVIYESIKQKLLECKTASMMETDEESVKEASDFVRMMLAAATSKTCATTIAYPHEVVRTRLREEGTK-----------------YRSFFQTLSLIVQEEGYGSLYRGLTTHLVRQIPNTAIMMATYELVVYLL 309          
The following BLAST results are available for this feature:
BLAST of CX290144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
ADT_KLULA9.263e-1630.98ADP,ATP carrier protein OS=Kluyveromyces lactis GN... [more]
UCP3_CANFA1.580e-1528.50Mitochondrial uncoupling protein 3 OS=Canis famili... [more]
UCP2_CYPCA1.580e-1528.22Mitochondrial uncoupling protein 2 OS=Cyprinus car... [more]
UCP3_PIG3.520e-1529.23Mitochondrial uncoupling protein 3 OS=Sus scrofa G... [more]
TPC1_ASPNC4.597e-1529.53Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
UCP2_DANRE7.841e-1528.22Mitochondrial uncoupling protein 2 OS=Danio rerio ... [more]
ADT4_BOVIN7.841e-1526.60ADP/ATP translocase 4 OS=Bos taurus GN=SLC25A31 PE... [more]
UCP3_BOVIN1.747e-1428.50Mitochondrial uncoupling protein 3 OS=Bos taurus G... [more]
TPC1_AJECN1.747e-1428.28Mitochondrial thiamine pyrophosphate carrier 1 OS=... [more]
S2536_MOUSE2.980e-1426.73Solute carrier family 25 member 36 OS=Mus musculus... [more]

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Properties
Property NameValue
Genbank descriptionC02021A02SK IF1 Citrus clementina cDNA clone C02021A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290144 ID=CX290144; Name=CX290144; organism=Citrus clementina; type=EST; length=727bp
GGAGCATGTGCTGGAATAATTGCCATGTCTGCCACTTACCCCATGGATAT
GGTACGGGGGAGGCTAACTGTTCAGACAGAAAAGTCTCCATACCGGTACA
GGGGAATCTTCCATGCTCTTTCAACTGTGCTGCGGGAAGAAGGCCCACGG
GCTTTGTACAGGGGCTGGTTTCCTTCAGTAATTGGAGTTGTCCCCTACGT
GGGTCTCAACTTTGCTGTGTATGAATCTTTAAAAGTTTGGTTAATCAAAA
CTAAGCCCCTTGGGTTAGCTGAAGATTCTGAGTTGAGTGTGACGACAAGA
CTAGCGTGTGGAGCTGCTGCAGGAACAGTTGGCCAAACTGTTGCCTACCC
TCTTGATGTTATACGCCGAAGAATGCAGATGGTGGGTTGGAAAGAAGCTT
CCTCTGTGGTCATTGGTGATGGGAGAAACAGAGCTCCTCTTGAATATAAT
GGCATGATTGATGCATTCCGAAAAACTGTCCGGCACGAGGGGTTTGGAGC
ATTATACAAGGGCTTGGTTCCCAATTCTGTGAAGGTTGTTCCATCCATAT
CACTAGCATTTGTGACTTATGAGGTGGTGAAGGACATTTTAGGAGTTGAA
ATTAGAATATCAGACTGAAGTTTGTGGAACTTTGACATTTGTTGGACAGA
GGTGTTATTTTTGTAGGGAAGGGGTTAGGGAAAAGGTAAAGTAGGCATTC
TTGCCTTTTGTCTTTCTAAGGTCAAGT
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