CX290144

Overview
NameCX290144
Unique NameCX290144
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length727
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: MCATL_BOVIN (Mitochondrial carnitine/acylcarnitine carrier protein CACL OS=Bos taurus GN=SLC25A29 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13
Identity = 54/193 (27.98%), Postives = 82/193 (42.49%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVV 579
            GA AG I      PM++ + RL +Q       YRG    L+ + R+EG R + RG   +++   P  G+ F  Y+ L      T+ LG      L V   L              YP+DV++ R+Q             DG   AP  Y G++D  +++ R EG+    +GL    ++  P  +  F T  VV
Sbjct:   99 GAAAGAIQCVICCPMELAKTRLQLQEAGPARTYRGPLDCLAQIYRQEGLRGVNRGMVSTLLRETPSFGVYFLTYDVL------TRALGCEPGDRLLVPKLLLAGGTSGIASWLSTYPVDVVKSRLQ------------ADGLQGAP-RYRGIVDCVQQSYREEGWRVFTRGLASTLLRAFPVNAATFATVTVV 272          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: ADT_CHLKE (ADP,ATP carrier protein OS=Chlorella kessleri PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13
Identity = 54/198 (27.27%), Postives = 84/198 (42.42%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYR-YRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDIL 591
            G  AG  ++   YP+D  R RL         R + G+   LS V++  GP ALY+G+  SV G++ Y G  F +Y++ K  L K       ++   +   +               YP D +RRR+ M    E               +YNG ID +RK  + EG  A +KG   N ++     +   V Y+ +K  +
Sbjct:  154 GGLAGAGSLLIVYPLDFARTRLAADVGSGKSREFTGLVDCLSKVVKRGGPMALYQGFGVSVQGIIVYRGAYFGLYDTAKGVLFK-------DERTANFFAKWAVAQAVTAGAGVLSYPFDTVRRRLMMQSGGER--------------QYNGTIDCWRKVAQQEGMKAFFKGAWSNVLRGAGG-AFVLVLYDEIKKFI 329          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: ADT3_BOVIN (ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=2 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13
Identity = 54/199 (27.14%), Postives = 87/199 (43.72%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKS--PYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDIL 591
            G  AG  ++   YP+D  R RL     KS     +RG+   L  + + +G R LY+G+  SV G++ Y    F +Y++ K  L   K   +     ++ T                 YP D +RRRM M             GR  A + Y G +D +RK ++ EG  A +KG   N ++ +   +   V Y+ +K ++
Sbjct:  120 GGAAGATSLCFVYPLDFARTRLAADVGKSGSEREFRGLGDCLVKITKSDGIRGLYQGFNVSVQGIIIYRAAYFGIYDTAKGMLPDPKNTHIVVSWMIAQTV--------TAVAGVVSYPFDTVRRRMMM-----------QSGRKGADIMYKGTVDCWRKILKDEGGKAFFKGAWSNVLRGMGG-AFVLVLYDELKKVI 298          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: ADT1_YEAST (ADP,ATP carrier protein 1 OS=Saccharomyces cerevisiae GN=AAC1 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.479e-13
Identity = 52/179 (29.05%), Postives = 77/179 (43.02%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTE----KSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPN 525
            G  AG +++   Y +D  R RL          S  ++ G+       L+ +G   LYRG+ PSV+G++ Y GL F +Y+S        KP+ L    E S                   YPLD +RRRM M   +               ++Y+G +D  RK V+ EG  +L+KG   N
Sbjct:  125 GGAAGGLSLLFVYSLDYARTRLAADARGSKSTSQRQFNGLLDVYKKTLKTDGLLGLYRGFVPSVLGIIVYRGLYFGLYDSF-------KPVLLTGALEGSFVASFLLGWVITMGASTASYPLDTVRRRMMMTSGQ--------------TIKYDGALDCLRKIVQKEGAYSLFKGCGAN 282          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: UCP2_PONAB (Mitochondrial uncoupling protein 2 OS=Pongo abelii GN=UCP2 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.523e-13
Identity = 54/201 (26.87%), Postives = 87/201 (43.28%), Query Frame = 1
Query:   10 AGIIAMSATYPMDMVRGRLTVQTEK-------SPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDIL 591
            A  IA   T+P+D  + RL +Q E        +  +YRG+   + T++R EGPR+LY G    +   + +  +   +Y+S+K +  K            S+ +RL               P DV++ R Q       +    G GR      Y   ++A++   R EGF  L+KG  PN  +         VTY+++KD L
Sbjct:   23 AACIADLITFPLDTAKVRLQIQGESQGPVHATASAQYRGVMGTILTMVRTEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKQFYTK-------GSEHASIGSRLLAGSTTGALAVAVAQPTDVVKVRFQ-------AQARAGGGR-----RYQSTVNAYKTIAREEGFRGLWKGTSPNVARNAIVNCAELVTYDLIKDAL 204          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: UCP5_MOUSE (Brain mitochondrial carrier protein 1 OS=Mus musculus GN=Slc25a14 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.295e-13
Identity = 59/216 (27.31%), Postives = 93/216 (43.06%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYR-----YRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDILGVEIRISD*SLWNF 633
            G  A I+A   T+P+D+ + RL VQ +    R     YRG+FHAL  + +EEG  ALY G  P+++    Y  +   +Y+SLK   ++       ED  L +   +               P DV++ RMQ  G                 L    MI +F    + EG   L++G+VP + +    + +    Y++ K  L V   + D  L +F
Sbjct:   47 GGLASIVAEFGTFPVDLTKTRLQVQGQSIDVRFKEIKYRGMFHALFRIYKEEGILALYSGIAPALLRQASYGTIKIGIYQSLKRLFVER-----LEDETLLI--NMICGVVSGVISSTIANPTDVLKIRMQAQG----------------SLFQGSMIGSFIDIYQQEGTRGLWRGVVPTAQRAAIVVGVELPVYDITKKHLIVSGMLGDTILTHF 239          

HSP 2 Score: 67.781 bits (164), Expect = 6.869e-11
Identity = 55/194 (28.35%), Postives = 85/194 (43.81%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVK 582
            G  +G+I+ +   P D+++ R+  Q         G F     + ++EG R L+RG  P+       VG+   VY+  K  LI +  LG       ++ T                 P+DV+R RM           ++G       L Y G +D   K  +HEGF ALYKG  PN +++ P   + F+TYE +K
Sbjct:  148 GVVSGVISSTIANPTDVLKIRMQAQGSLFQGSMIGSF---IDIYQQEGTRGLWRGVVPTAQRAAIVVGVELPVYDITKKHLIVSGMLGD------TILTHFVSSFTCGLAGALASNPVDVVRTRMMN------QRAIVG----HVDL-YKGTLDGILKMWKHEGFFALYKGFWPNWLRLGPWNIIFFITYEQLK 321          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: GDC_RAT (Graves disease carrier protein (Fragment) OS=Rattus norvegicus GN=Slc25a16 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.295e-13
Identity = 60/199 (30.15%), Postives = 89/199 (44.72%), Query Frame = 1
Query:    1 GACAGIIAMSA---TYPMDMVRGRLTVQTEKSPYRYRGIFHALSTVLREEGP-RALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSE-------LSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGF-GALYKGLVPNSVKVVPSISLAF 561
            G+ AG ++M+A   TYP+D+VR RL  Q  K  + Y GI HA  T+  +EG     YRG  P+++G+ PY  ++F  + +LK   +   P  L   S        L     L              YP DV RRRMQ+         V+ +           M +  +    H G    LY+GL  N ++ +PS ++AF
Sbjct:  137 GSMAGKMSMTAVICTYPLDVVRVRLAFQV-KGEHTYSGIIHAFKTIYAKEGGFLGFYRGLMPTILGMAPYASVSFFTFGTLKSVGLSYAPTLLGRPSSDNPNVLVLKTHINLLCGGVARAIAQTISYPFDVTRRRMQL-------GAVLPEFEKCLT-----MRETMKYVYGHHGIRRGLYRGLSLNYIRCIPSQAVAF 322          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: YEA6_YEAST (Probable mitochondrial carrier YEL006W OS=Saccharomyces cerevisiae GN=YEL006W PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.620e-13
Identity = 53/199 (26.63%), Postives = 94/199 (47.24%), Query Frame = 1
Query:    1 GACAGIIAMSATYPMDMVRGRLTVQ-----TEKSPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVK 582
            GA +G ++     P D+ + RL  Q     T +S + Y+G F   +T+ ++EG   LY+G  P+V+G +P + + F+VY+  + + +   P      +  S  T                 P+ V++ R+           ++  G  +    Y G ID FRK ++ EG  ALY GLVP  + ++ ++++ F  YE +K
Sbjct:   45 GALSGALSAMLVCPFDVAKTRLQAQGLQNMTHQSQH-YKGFFGTFATIFKDEGAAGLYKGLQPTVLGYIPTLMIYFSVYDFCRKYSVDIFPHSPFLSNASSAIT-------AGAISTVATNPIWVVKTRL-----------MLQTGIGKYSTHYKGTIDTFRKIIQQEGAKALYAGLVPALLGML-NVAIQFPLYENLK 223          

HSP 2 Score: 73.1738 bits (178), Expect = 1.635e-12
Identity = 56/197 (28.43%), Postives = 93/197 (47.21%), Query Frame = 1
Query:   10 AGIIAMSATYPMDMVRGRLTVQTEKSPY--RYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXX-YPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDIL 591
            AG I+  AT P+ +V+ RL +QT    Y   Y+G       ++++EG +ALY G  P+++G++  V + F +YE+LK+    ++   ++ D   S   +L               YP +++R RMQ+      S +     R+  PL         + T R EGF   Y G   N V+ VP+  +  V++E  K  L
Sbjct:  148 AGAISTVATNPIWVVKTRLMLQTGIGKYSTHYKGTIDTFRKIIQQEGAKALYAGLVPALLGMLN-VAIQFPLYENLKIRFGYSESTDVSTDVTSSNFQKLILASMLSKMVASTVTYPHEILRTRMQL-----KSDLPNTVQRHLLPL--------IKITYRQEGFAGFYSGFATNLVRTVPAAVVTLVSFEYSKKYL 330          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: UCP2_PIG (Mitochondrial uncoupling protein 2 OS=Sus scrofa GN=UCP2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.620e-13
Identity = 53/201 (26.37%), Postives = 86/201 (42.79%), Query Frame = 1
Query:   10 AGIIAMSATYPMDMVRGRLTVQTEK-------SPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDIL 591
            A  IA   T+P+D  + RL +Q E+       +  +YRG+   + T++R EGPR+LY G    +   + +  +   +Y+S+K +  K             + +RL               P DV++ R Q       +    G GR      Y   +DA++   R EG   L+KG  PN  +         VTY+++KD L
Sbjct:   23 AACIADLITFPLDTAKVRLQIQGERRGPVQAAASAQYRGVLGTILTMVRNEGPRSLYNGLVAGLQRQMSFASVRIGLYDSVKHFYTK-------GSEHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQ-------AQARAGGGR-----RYRSTVDAYKTIAREEGLRGLWKGTSPNVARNAIVNCAELVTYDLIKDTL 204          
BLAST of CX290144 vs. ExPASy Swiss-Prot
Match: UCP2_BOVIN (Mitochondrial uncoupling protein 2 OS=Bos taurus GN=UCP2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.620e-13
Identity = 52/201 (25.87%), Postives = 85/201 (42.29%), Query Frame = 1
Query:   10 AGIIAMSATYPMDMVRGRLTVQTEK-------SPYRYRGIFHALSTVLREEGPRALYRGWFPSVIGVVPYVGLNFAVYESLKVWLIKTKPLGLAEDSELSVTTRLXXXXXXXXXXXXXXYPLDVIRRRMQMVGWKEASSVVIGDGRNRAPLEYNGMIDAFRKTVRHEGFGALYKGLVPNSVKVVPSISLAFVTYEVVKDIL 591
            A  IA   T+P+D  + RL +Q E+       +  +YRG+   + T++R EGPR+LY G    +   + +  +   +Y+S+K +  K             + +RL               P DV++ R Q               R  A   Y   ++A++   R EGF  L+KG  PN  +         VTY+++KD L
Sbjct:   23 AACIADLITFPLDTAKVRLQIQGERQGPMQAAASAQYRGVLGTILTMVRTEGPRSLYSGLVAGLQRQMSFASVRIGLYDSVKQFYTKGS-------EHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQ------------AQARAGAGRRYQSTVEAYKTIAREEGFRGLWKGTSPNVARNAIVNCAELVTYDLIKDTL 204          
The following BLAST results are available for this feature:
BLAST of CX290144 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 148
Match NameE-valueIdentityDescription
MCATL_BOVIN1.479e-1327.98Mitochondrial carnitine/acylcarnitine carrier prot... [more]
ADT_CHLKE1.479e-1327.27ADP,ATP carrier protein OS=Chlorella kessleri PE=3... [more]
ADT3_BOVIN1.479e-1327.14ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=... [more]
ADT1_YEAST1.479e-1329.05ADP,ATP carrier protein 1 OS=Saccharomyces cerevis... [more]
UCP2_PONAB2.523e-1326.87Mitochondrial uncoupling protein 2 OS=Pongo abelii... [more]
UCP5_MOUSE3.295e-1327.31Brain mitochondrial carrier protein 1 OS=Mus muscu... [more]
GDC_RAT3.295e-1330.15Graves disease carrier protein (Fragment) OS=Rattu... [more]
YEA6_YEAST5.620e-1326.63Probable mitochondrial carrier YEL006W OS=Saccharo... [more]
UCP2_PIG5.620e-1326.37Mitochondrial uncoupling protein 2 OS=Sus scrofa G... [more]
UCP2_BOVIN5.620e-1325.87Mitochondrial uncoupling protein 2 OS=Bos taurus G... [more]

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Properties
Property NameValue
Genbank descriptionC02021A02SK IF1 Citrus clementina cDNA clone C02021A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290144 ID=CX290144; Name=CX290144; organism=Citrus clementina; type=EST; length=727bp
GGAGCATGTGCTGGAATAATTGCCATGTCTGCCACTTACCCCATGGATAT
GGTACGGGGGAGGCTAACTGTTCAGACAGAAAAGTCTCCATACCGGTACA
GGGGAATCTTCCATGCTCTTTCAACTGTGCTGCGGGAAGAAGGCCCACGG
GCTTTGTACAGGGGCTGGTTTCCTTCAGTAATTGGAGTTGTCCCCTACGT
GGGTCTCAACTTTGCTGTGTATGAATCTTTAAAAGTTTGGTTAATCAAAA
CTAAGCCCCTTGGGTTAGCTGAAGATTCTGAGTTGAGTGTGACGACAAGA
CTAGCGTGTGGAGCTGCTGCAGGAACAGTTGGCCAAACTGTTGCCTACCC
TCTTGATGTTATACGCCGAAGAATGCAGATGGTGGGTTGGAAAGAAGCTT
CCTCTGTGGTCATTGGTGATGGGAGAAACAGAGCTCCTCTTGAATATAAT
GGCATGATTGATGCATTCCGAAAAACTGTCCGGCACGAGGGGTTTGGAGC
ATTATACAAGGGCTTGGTTCCCAATTCTGTGAAGGTTGTTCCATCCATAT
CACTAGCATTTGTGACTTATGAGGTGGTGAAGGACATTTTAGGAGTTGAA
ATTAGAATATCAGACTGAAGTTTGTGGAACTTTGACATTTGTTGGACAGA
GGTGTTATTTTTGTAGGGAAGGGGTTAGGGAAAAGGTAAAGTAGGCATTC
TTGCCTTTTGTCTTTCTAAGGTCAAGT
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