CX290145

Overview
NameCX290145
Unique NameCX290145
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length692
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX290145 vs. ExPASy Swiss-Prot
Match: DFRA_GERHY (Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=DFR PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.697e-11
Identity = 44/160 (27.50%), Postives = 81/160 (50.62%), Query Frame = 2 
Query:   14 KTLAEKAAWEFAEKHGVDVVAIHPATCLGPLMQPYLNASCAVLQQLLQGSKDTQEYHWLGA-VHVKDVAKAQVLLFESPAASGRYLCTNGIYQFGDFAERVSKLFPEFPV-HRFDGETQPGLIPCKDAAKRLMDLGLVFT-PVEDAVRETVESLKAKGFL 484
            KTLAEKAAW+  + + +  ++I P   +GP +      S      L+ G++        G  VH+ D+ +  + L+E+P A GRY+C++        A+ +   +PE+ +  +F G  +  L     ++K+L+D G  F   +ED  +  +++ + KG L
Sbjct:  168 KTLAEKAAWDATKGNNISFISIIPTLVVGPFITSTFPPSLVTALSLITGNEAHYSIIKQGQYVHLDDLCECHIYLYENPKAKGRYICSSHDATIHQLAKIIKDKWPEYYIPTKFPGIDEE-LPIVSFSSKKLIDTGFEFKYNLEDMFKGAIDTCREKGLL 326
The following BLAST results are available for this feature:
BLAST of CX290145 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
DFRA_GERHY3.697e-1127.50Dihydroflavonol-4-reductase OS=Gerbera hybrida GN=... [more]

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Properties
Property NameValue
Genbank descriptionC02021A03SK IF1 Citrus clementina cDNA clone C02021A03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290145 ID=CX290145; Name=CX290145; organism=Citrus clementina; type=EST; length=692bp
AATTCGGCAGAGGAAGACATTGGCAGAGAAAGCTGCATGGGAGTTTGCTG
AGAAACATGGGGTGGATGTTGTGGCCATCCATCCTGCTACATGTCTGGGG
CCACTCATGCAGCCTTATTTAAACGCGAGCTGTGCTGTACTACAGCAGTT
GTTACAGGGTTCAAAAGATACTCAAGAGTATCACTGGTTGGGAGCAGTTC
ATGTTAAAGATGTAGCAAAGGCGCAAGTGTTGCTATTTGAATCTCCTGCT
GCTTCTGGTAGATATCTGTGCACAAATGGTATCTATCAGTTTGGTGACTT
TGCTGAAAGAGTCTCTAAACTCTTCCCTGAGTTTCCAGTTCACAGGTTCG
ATGGGGAAACTCAACCAGGTCTGATTCCTTGCAAAGATGCGGCCAAGAGA
TTAATGGATTTGGGGCTAGTTTTCACTCCTGTTGAAGATGCTGTTCGTGA
AACAGTAGAAAGTCTGAAAGCCAAAGGCTTCTTGGGGCAGCATGTATCAC
AATCTTAGTGTCGTTTTTATTTTTCTGGTTTAGGGAGGAGGGTGAGAGGG
GGGCCTGGCCCTGGTGGTTTGGTGCTAATTCTTTCAAATTTCCGTTTCTT
TACTTAGTTGTCAGTAATTATGAATGCAATAAAGTCATTACAATTTACTG
ATATAAATTAATTTACGTCTCTCTTTCATCATTCTTATGTTC
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