CX290212

Overview
NameCX290212
Unique NameCX290212
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length758
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 8.928e-57
Identity = 115/240 (47.92%), Postives = 158/240 (65.83%), Query Frame = 1
Query:   22 RFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGS-GLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWAHEWQNKGQL 738
            +F +  V   TNNF +  ++G GGFG VY G +N   +VAVK  +  S QG  +F+ E+E+L +  H++LV L+GYC+E +++ LIYEYM NG L  H+ G  G   L+W  RL+I + +A+GL YLH G    ++HRDVK+ NILL+E+F  K+ADFGLS++ P   +THVST V G+ GYLDPEY+R   LTEKSDVYSFGVVL  ++  +PVID    RE  + + W      KG +
Sbjct:  566 KFTYAEVLTMTNNFQK--ILGKGGFGIVYYGSVNGTEQVAVKMLSHSSAQGYKQFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHMSGKRGGSILNWGTRLKIALEAAQGLEYLHNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVSTVVAGTIGYLDPEYYRTNWLTEKSDVYSFGVVLLVMITNQPVIDQN--REKRHIAEWVGGMLTKGDI 801          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 8.928e-57
Identity = 111/225 (49.33%), Postives = 151/225 (67.11%), Query Frame = 1
Query:   76 VIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLPS--LSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWAHEWQNKGQLDQ 744
            +IG GGFG VY+G L+DG +VAVK  +  S QG  EF  E+ +LS  +H +LV L+GYC+E ++ IL+Y +M NG+L   LYG       L W  RL I +G+ARGL YLHT   ++VIHRDVKS+NILLD +  AKVADFG SK  P+   ++VS  V+G+ GYLDPEY++ QQL+EKSDV+SFGVVL E++  R  ++   PR   +   WA  +    ++D+
Sbjct:  600 LIGEGGFGSVYRGTLDDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSYVSLEVRGTAGYLDPEYYKTQQLSEKSDVFSFGVVLLEIVSGREPLNIKRPRVEWSLVEWAKPYIRASKVDE 824          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: Y5182_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana GN=At1g51820 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 7.558e-56
Identity = 118/240 (49.17%), Postives = 156/240 (65.00%), Query Frame = 1
Query:   22 RFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGS-GLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWAHEWQNKGQL 738
            RF +  V   TNNF    ++G GGFG VY G +N   +VAVK  +  S QG  +F+ E+E+L +  H++LV L+GYCDE + + LIYEYM NG LK H+ G+     L+W  RL+I I SA+GL YLH G    ++HRDVK+ NILL+E+F AK+ADFGLS++     +THVST V G+ GYLDPEY R   LTEKSDVYSFG++L E++  R VID +  RE  +   W      KG +
Sbjct:  567 RFSYSQVVIMTNNFQR--ILGKGGFGMVYHGFVNGTEQVAVKILSHSSSQGYKQFKAEVELLLRVHHKNLVGLVGYCDEGDNLALIYEYMANGDLKEHMSGTRNRFILNWGTRLKIVIESAQGLEYLHNGCKPPMVHRDVKTTNILLNEHFEAKLADFGLSRSFLIEGETHVSTVVAGTPGYLDPEYHRTNWLTEKSDVYSFGILLLEIITNRHVIDQS--REKPHIGEWVGVMLTKGDI 802          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: Y5189_ARATH (Probable LRR receptor-like protein kinase At1g51890 OS=Arabidopsis thaliana GN=At1g51890 PE=2 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 1.684e-55
Identity = 111/226 (49.12%), Postives = 154/226 (68.14%), Query Frame = 1
Query:   22 RFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGS-GLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVN 696
            +F +  V + T NF+   V+G GGFG VY G L+D T+VAVK  +  S QG  EF+ E+E+L +  HRHLV L+GYCD+ + + LIYEYME G L+ ++ G   +  LSW+ R++I + +A+GL YLH G    ++HRDVK  NILL+E   AK+ADFGLS++ P   ++HV T V G+ GYLDPEY+R   L+EKSDVYSFGVVL E++  +PV++    R  +N
Sbjct:  559 KFTYSEVLKMTKNFER--VLGKGGFGTVYHGNLDD-TQVAVKMLSHSSAQGYKEFKAEVELLLRVHHRHLVGLVGYCDDGDNLALIYEYMEKGDLRENMSGKHSVNVLSWETRMQIAVEAAQGLEYLHNGCRPPMVHRDVKPTNILLNERSQAKLADFGLSRSFPVDGESHVMTVVAGTPGYLDPEYYRTNWLSEKSDVYSFGVVLLEIVTNQPVMNKNRERPHIN 781          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.872e-55
Identity = 110/228 (48.25%), Postives = 152/228 (66.67%), Query Frame = 1
Query:   40 VQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKR--GNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLY---GSGLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRW 708
            ++  TNNF    ++G GGFG VYKGEL+DGTK+AVKR      + +G AEF++EI +L++ RHRHLV+L+GYC + NE +L+YEYM  GTL  HL+     GL  L WKQRL + +  ARG+ YLH    ++ IHRD+K +NILL ++  AKVADFGL +  PE  +  + T + G+FGYL PEY    ++T K DVYSFGV+L E++  R  +D + P E ++   W
Sbjct:  581 LRSVTNNFSSDNILGSGGFGVVYKGELHDGTKIAVKRMENGVIAGKGFAEFKSEIAVLTKVRHRHLVTLLGYCLDGNEKLLVYEYMPQGTLSRHLFEWSEEGLKPLLWKQRLTLALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPE-GKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRKSLDESQPEESIHLVSW 807          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: PAM74_ARATH (Probable LRR receptor-like serine/threonine-protein kinase PAM74 OS=Arabidopsis thaliana GN=PAM74 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.872e-55
Identity = 110/230 (47.83%), Postives = 154/230 (66.96%), Query Frame = 1
Query:   22 RFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYG-SGLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRW 708
            RF +  V + TNNF    V+G GGFG V  G +N   +VAVK  +  S QG   F+ E+++L +  H +LVSL+GYCDE++ + LIYE++  G L+ HL G SG   ++W  RL I + +A GL YLH+G    ++HRD+K+ NILLDE   AK+ADFGLS++ P   +TH+ST V G+ GYLDPEY++  +L EKSDVYSFG+VL E++  +PVID +  R   + S+W
Sbjct:  568 RFTYSEVIKMTNNFQR--VVGEGGFGVVCHGTINGSEQVAVKVLSQSSSQGYKHFKAEVDLLLRVHHTNLVSLVGYCDERDHLALIYEFLPKGDLRQHLSGKSGGSFINWGNRLRIALEAALGLEYLHSGCTPPIVHRDIKTTNILLDEQLKAKLADFGLSRSFPIGGETHISTVVAGTPGYLDPEYYQTTRLGEKSDVYSFGIVLLEIITNQPVIDQS--RSKSHISQW 793          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 8.357e-55
Identity = 113/239 (47.28%), Postives = 148/239 (61.92%), Query Frame = 1
Query:   19 YRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWAHEWQNKGQ 735
            Y F +  ++ AT +FD S  +G GGFG VYKG+LNDG +VAVK  +  S+QG  +F  EI  +S  +HR+LV L G C E    +L+YEY+ NG+L   L+G     L W  R EIC+G ARGL YLH      ++HRDVK++NILLD   + KV+DFGL+K   +  +TH+ST V G+ GYL PEY  R  LTEK+DVY+FGVV  E++  RP  D  L  E      WA     KG+
Sbjct:  679 YTFTYSELKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGSRQGKGQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLPNGSLDQALFGEKTLHLDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYDD-KKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEDEKRYLLEWAWNLHEKGR 916          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: Y5374_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g37450 OS=Arabidopsis thaliana GN=At5g37450 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 8.357e-55
Identity = 115/225 (51.11%), Postives = 146/225 (64.89%), Query Frame = 1
Query:    4 NSNSGYRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSK----TGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCA-RPV 663
            N  S   + F  +  AT++F +   IG GG+GKVYKG L  G  VAVKR    S QG  EF TEIE+LS+  HR+LVSL+GYCD+K E +L+YEYM NG+L+  L       LS   RL I +GSARG+ YLHT     +IHRD+K +NILLD     KVADFG+SK     G  + + HV+T VKG+ GY+DPEY+   +LTEKSDVYS G+V  E+L   RP+
Sbjct:  612 NMESVKGYNFTELDSATSSFSDLSQIGRGGYGKVYKGHLPGGLVVAVKRAEQGSLQGQKEFFTEIELLSRLHHRNLVSLLGYCDQKGEQMLVYEYMPNGSLQDALSARFRQPLSLALRLRIALGSARGILYLHTEADPPIIHRDIKPSNILLDSKMNPKVADFGISKLIALDGGGVQRDHVTTIVKGTPGYVDPEYYLSHRLTEKSDVYSLGIVFLEILTGMRPI 836          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: Y5596_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g59680 OS=Arabidopsis thaliana GN=At5g59680 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.091e-54
Identity = 111/240 (46.25%), Postives = 156/240 (65.00%), Query Frame = 1
Query:   22 RFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSG-LPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWAHEWQNKGQL 738
            +F +  V + TNNF    V+G GGFG V  G +N   +VAVK  +  S QG  EF+ E+++L +  H +LVSL+GYCDE + + LIYE++ NG L+ HL G G  P ++W  RL I   +A GL YLH G    ++HRDVK+ NILLDE++ AK+ADFGLS++ P   ++HVST + G+ GYLDPEY+   +L+EKSDVYSFG+VL E++  + VID    R   + ++W     N G +
Sbjct:  569 KFTYSEVTKMTNNFGR--VVGEGGFGVVCHGTVNGSEQVAVKLLSQSSTQGYKEFKAEVDLLLRVHHTNLVSLVGYCDEGDHLALIYEFVPNGDLRQHLSGKGGKPIVNWGTRLRIAAEAALGLEYLHIGCTPPMVHRDVKTTNILLDEHYKAKLADFGLSRSFPVGGESHVSTVIAGTPGYLDPEYYHTSRLSEKSDVYSFGIVLLEMITNQAVIDRN--RRKSHITQWVGSELNGGDI 804          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: Y1839_ARATH (Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 1.425e-54
Identity = 117/233 (50.21%), Postives = 157/233 (67.38%), Query Frame = 1
Query:   25 FPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKN--EMILIYEYMENGTLKGHLYG--SGLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWA 711
            F +  ++EATNNFD S  +G GGFG VY G+L DG  VAVKR    + +   +F+ E+E+L+  RH +LV+L G C  K   +++L+YEY+ NGTL  HL+G  +   SL W  RL+I + +A  L YLH   A  +IHRDVKS NILLD+NF  KVADFGLS+  P +D+THVSTA +G+ GY+DP+Y    QL+ KSDVYSF VVL E++ + P +D T PR+ +N S  A
Sbjct:  332 FSYEELEEATNNFDPSKELGDGGFGTVYYGKLKDGRSVAVKRLYDNNFKRAEQFRNEVEILTGLRHPNLVALFG-CSSKQSRDLLLVYEYVANGTLADHLHGPQANPSSLPWSIRLKIAVETASALKYLH---ASKIIHRDVKSNNILLDQNFNVKVADFGLSRLFP-MDKTHVSTAPQGTPGYVDPDYHLCYQLSNKSDVYSFAVVLMELISSLPAVDITRPRQEINLSNMA 559          
The following BLAST results are available for this feature:
BLAST of CX290212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5181_ARATH8.928e-5747.92Probable LRR receptor-like serine/threonine-protei... [more]
NORK_PEA8.928e-5749.33Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
Y5182_ARATH7.558e-5649.17Probable LRR receptor-like serine/threonine-protei... [more]
Y5189_ARATH1.684e-5549.12Probable LRR receptor-like protein kinase At1g5189... [more]
TMK1_ARATH2.872e-5548.25Probable receptor protein kinase TMK1 OS=Arabidops... [more]
PAM74_ARATH2.872e-5547.83Probable LRR receptor-like serine/threonine-protei... [more]
Y5614_ARATH8.357e-5547.28Probable LRR receptor-like serine/threonine-protei... [more]
Y5374_ARATH8.357e-5551.11Probable LRR receptor-like serine/threonine-protei... [more]
Y5596_ARATH1.091e-5446.25Probable LRR receptor-like serine/threonine-protei... [more]
Y1839_ARATH1.425e-5450.21Probable serine/threonine-protein kinase At1g18390... [more]

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Properties
Property NameValue
Genbank descriptionC02021G02SK IF1 Citrus clementina cDNA clone C02021G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290212 ID=CX290212; Name=CX290212; organism=Citrus clementina; type=EST; length=758bp
GCCAATTCTAACTCGGGTTACCGCTTCCCTTTTGTTGCTGTTCAAGAAGC
CACAAACAACTTCGACGAGAGCTGGGTTATTGGGATTGGTGGTTTTGGGA
AGGTATACAAAGGAGAGCTGAATGATGGTACAAAAGTGGCTGTTAAGAGG
GGAAACCCCCGATCCCAGCAGGGACTTGCAGAGTTCCAAACCGAGATTGA
GATGCTGTCTCAGTTCCGGCACCGCCATCTGGTTTCATTAATTGGATATT
GTGATGAAAAGAATGAGATGATCTTGATTTATGAATATATGGAAAATGGG
ACCCTCAAGGGTCATCTCTATGGCTCCGGTCTTCCCAGCTTGAGTTGGAA
GCAGAGACTTGAGATTTGCATTGGATCTGCTAGGGGACTTCATTACCTTC
ACACTGGCTATGCCAAAGCAGTTATTCACCGTGATGTAAAGTCTGCAAAT
ATCTTACTTGATGAGAACTTCATGGCAAAGGTTGCTGATTTTGGATTGTC
CAAGACAGGACCTGAAATTGATCAAACCCATGTGAGTACTGCAGTGAAAG
GAAGTTTTGGGTATCTTGATCCTGAATACTTCAGAAGGCAGCAACTAACT
GAAAAGTCAGATGTTTATTCATTCGGAGTGGTTTTGTTTGAAGTCCTTTG
TGCCAGACCTGTTATAGATCCAACTCTTCCGAGGGAAATGGTGAACTTTA
GCCGATGGGCCCATGAATGGCAGAATAAGGGGCAGCTGGATCAATCATCG
ACCTACTC
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