CX290212

Overview
NameCX290212
Unique NameCX290212
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length758
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.176e-54
Identity = 116/250 (46.40%), Postives = 157/250 (62.80%), Query Frame = 1
Query:    1 ANSNSGYRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCD-----EKNEMILIYEYMENGTLKGHLYGSGLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWAHEWQNKGQ 735
            + S +  +F F  +++ATNNF    +IG GG+G V+KG L DGT+VA KR    S  G A F  E+E+++  RH +L++L GYC      E ++ I++ + + NG+L  HL+G     L+W  R  I +G ARGL YLH G   ++IHRD+K++NILLDE F AKVADFGL+K  PE   TH+ST V G+ GY+ PEY    QLTEKSDVYSFGVVL E+L  R  I      + V+ + WA     +GQ
Sbjct:  263 SESTTLVKFSFDEIKKATNNFSRHNIIGRGGYGNVFKGALPDGTQVAFKRFKNCSAGGDANFAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGDLEAQLAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPE-GMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELLSRRKAIVTDEEGQPVSVADWAWSLVREGQ 511          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: WAKLP_ARATH (Wall-associated receptor kinase-like 15 OS=Arabidopsis thaliana GN=WAKL15 PE=2 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 7.074e-54
Identity = 111/239 (46.44%), Postives = 157/239 (65.69%), Query Frame = 1
Query:   40 VQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSG------LPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWAHEWQNKGQL 738
            + +AT+NF +S ++G GGFG+V+KG L+DGT VAVKR    +++ + +   E+++L Q  H++LV L+G C E    +L+YE++ NGTL  H+YG G         L  ++RL I   +A+GL YLH+  +  + HRDVKS+NILLDEN   KVADFGLS+ G   D +HV+T  +G+ GYLDPEY+   QLT+KSDVYSFGVVLFE+L  +  ID     E VN   +  +   +G+L
Sbjct:  347 IVKATDNFAKSNLLGFGGFGEVFKGNLDDGTTVAVKRAKLGNEKSIYQIVNEVQILCQVSHKNLVKLLGCCIELEMPVLVYEFVPNGTLFEHIYGGGGGGGGLYDHLPLRRRLMIAHQTAQGLDYLHSSSSPPIYHRDVKSSNILLDENLDVKVADFGLSRLGVS-DVSHVTTCAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVLFELLTCKKAIDFNREEEDVNLVVFVRKALKEGRL 584          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: SIRK_ARATH (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana GN=SIRK PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.576e-53
Identity = 109/214 (50.93%), Postives = 142/214 (66.36%), Query Frame = 1
Query:   25 FPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVI 666
            F +  V   TNNF+   VIG GGFGKVY G +N G +VAVK  +  S QG  EF+ E+++L +  H +L SL+GYC+E N M+LIYEYM N  L  +L G     LSW++RL+I + +A+GL YLH G    ++HRDVK  NILL+E   AK+ADFGLS++        +ST V GS GYLDPEY+  +Q+ EKSDVYS GVVL EV+  +P I
Sbjct:  564 FKYSEVVNITNNFER--VIGKGGFGKVYHGVIN-GEQVAVKVLSEESAQGYKEFRAEVDLLMRVHHTNLTSLVGYCNEINHMVLIYEYMANENLGDYLAGKRSFILSWEERLKISLDAAQGLEYLHNGCKPPIVHRDVKPTNILLNEKLQAKMADFGLSRSFSVEGSGQISTVVAGSIGYLDPEYYSTRQMNEKSDVYSLGVVLLEVITGQPAI 774          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.511e-53
Identity = 112/241 (46.47%), Postives = 149/241 (61.83%), Query Frame = 1
Query:   25 FPFVAVQEATNNFDESWVIGIGGFGKVYKGELND----------GTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGL--PSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWA 711
            F F  ++ AT NF    V+G GGFG V+KG +++          G  +AVK+ N    QG  E+  E+  L QF HRHLV LIGYC E    +L+YE+M  G+L+ HL+  GL    LSWK RL++ +G+A+GL +LH+   + VI+RD K++NILLD  + AK++DFGL+K GP  D++HVST V G+ GY  PEY     LT KSDVYSFGVVL E+L  R  +D   P    N   WA
Sbjct:   56 FSFAELKSATRNFRPDSVLGEGGFGCVFKGWIDEKSLTASRPGTGLVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHRHLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGLYFQPLSWKLRLKVALGAAKGLAFLHSSETR-VIYRDFKTSNILLDSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWA 295          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: Y1755_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07550 OS=Arabidopsis thaliana GN=At1g07550 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.585e-53
Identity = 121/241 (50.21%), Postives = 150/241 (62.24%), Query Frame = 1
Query:   22 RFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGS-GLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWAHEWQNKGQLD 741
            RF +  V + TNNF    VIG GGFG VY+G LN+  + A+K  +  S QG  EF+TE+E+L +  H  LVSLIGYCD+ N + LIYE M  G LK HL G  G   LSW  RL+I + SA G+ YLHTG    ++HRDVKS NILL E F AK+ADFGLS++   I      T V G+FGYLDPEY +   L+ KSDVYSFGVVL E++  + VID  L RE  N   W       G ++
Sbjct:  549 RFTYSDVNKMTNNFQV--VIGKGGFGVVYQGCLNN-EQAAIKVLSHSSAQGYKEFKTEVELLLRVHHEKLVSLIGYCDDDNGLALIYELMGKGNLKEHLSGKPGCSVLSWPIRLKIALESAIGIEYLHTGCKPKIVHRDVKSTNILLSEEFEAKIADFGLSRSF-LIGNEAQPTVVAGTFGYLDPEYHKTSLLSMKSDVYSFGVVLLEIISGQDVID--LSRENCNIVEWTSFILENGDIE 783          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 4.585e-53
Identity = 110/239 (46.03%), Postives = 145/239 (60.67%), Query Frame = 1
Query:   19 YRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWAHEWQNKGQ 735
            Y F +  ++ AT +FD S  +G GGFG VYKG LNDG  VAVK  +  S+QG  +F  EI  +S   HR+LV L G C E    +L+YEY+ NG+L   L+G     L W  R EIC+G ARGL YLH   +  ++HRDVK++NILLD   + +++DFGL+K   +  +TH+ST V G+ GYL PEY  R  LTEK+DVY+FGVV  E++  RP  D  L  E      WA     K +
Sbjct:  680 YIFTYSELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLSVGSRQGKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFGDKTLHLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQISDFGLAKLYDD-KKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEEEKKYLLEWAWNLHEKSR 917          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: Y5344_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana GN=At1g53440 PE=1 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 1.334e-52
Identity = 107/240 (44.58%), Postives = 150/240 (62.50%), Query Frame = 1
Query:   25 FPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLP--SLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWAHEWQNKGQL 738
            F    ++ ATNNFD    IG GGFG VYKG L DG  +AVK+ + +S+QG  EF TEI M+S  +H +LV L G C E  E++L+YEY+EN +L   L+G+      L W  R ++CIG A+GL YLH      ++HRD+K+ N+LLD +  AK++DFGL+K   E + TH+ST + G+ GY+ PEY  R  LT+K+DVYSFGVV  E++  +   +     E +    WA+  Q +G L
Sbjct:  655 FTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKVCIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLDEE-ENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFIYLLDWAYVLQEQGSL 893          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.334e-52
Identity = 108/240 (45.00%), Postives = 150/240 (62.50%), Query Frame = 1
Query:   25 FPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLP--SLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWAHEWQNKGQL 738
            F    ++ ATNNFD    IG GGFG VYKG L DG  +AVK+ + +S+QG  EF TEI M+S  +H +LV L G C E  E++L+YEY+EN +L   L+G+      L W  R +ICIG A+GL YLH      ++HRD+K+ N+LLD +  AK++DFGL+K   + + TH+ST + G+ GY+ PEY  R  LT+K+DVYSFGVV  E++  +   +     E V    WA+  Q +G L
Sbjct:  657 FTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSKSKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLNDD-ENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGSL 895          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: ACR4_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.334e-52
Identity = 109/234 (46.58%), Postives = 148/234 (63.25%), Query Frame = 1
Query:   25 FPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRS--QQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLP---SLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWA 711
            F +  +++A + F E  ++G G F  VYKG L DGT VAVKR    S  Q+   EF+TE+++LS+  H HL+SL+GYC+E  E +L+YE+M +G+L  HL+G        L W +R+ I + +ARG+ YLH      VIHRD+KS+NIL+DE   A+VADFGLS  GP    + ++    G+ GYLDPEY+R   LT KSDVYSFGV+L E+L  R  ID  +  E  N   WA
Sbjct:  500 FTYEELEKAADGFKEESIVGKGSFSCVYKGVLRDGTTVAVKRAIMSSDKQKNSNEFRTELDLLSRLNHAHLLSLLGYCEECGERLLVYEFMAHGSLHNHLHGKNKALKEQLDWVKRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVADFGLSLLGPVDSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAID--MHYEEGNIVEWA 731          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: WAKLQ_ARATH (Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.742e-52
Identity = 108/242 (44.63%), Postives = 155/242 (64.05%), Query Frame = 1
Query:   40 VQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSG---LPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSK----TGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWAHEWQNKGQLDQ 744
            + +ATNNF +  +IG GGFG+V+K  L DGT  A+KR    + +G  +   E+ +L Q  HR LV L+G C +    +LIYE++ NGTL  HL+GS       L+W++RL+I   +A GL YLH+     + HRDVKS+NILLDE   AKV+DFGLS+    T    +++H+ T  +G+ GYLDPEY+R  QLT+KSDVYSFGVVL E++ ++  ID T   E VN   + ++  ++ +L +
Sbjct:  356 ITKATNNFSKDNLIGTGGFGEVFKAVLEDGTITAIKRAKLNNTKGTDQILNEVRILCQVNHRSLVRLLGCCVDLELPLLIYEFIPNGTLFEHLHGSSDRTWKPLTWRRRLQIAYQTAEGLAYLHSAAQPPIYHRDVKSSNILLDEKLNAKVSDFGLSRLVDLTETANNESHIFTGAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTREEEDVNLVMYINKMMDQERLTE 597          
The following BLAST results are available for this feature:
BLAST of CX290212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RKF3_ARATH3.176e-5446.40Probable LRR receptor-like serine/threonine-protei... [more]
WAKLP_ARATH7.074e-5446.44Wall-associated receptor kinase-like 15 OS=Arabido... [more]
SIRK_ARATH1.576e-5350.93Senescence-induced receptor-like serine/threonine-... [more]
APK1A_ARATH3.511e-5346.47Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
Y1755_ARATH4.585e-5350.21Probable LRR receptor-like serine/threonine-protei... [more]
Y1561_ARATH4.585e-5346.03Probable LRR receptor-like serine/threonine-protei... [more]
Y5344_ARATH1.334e-5244.58Probable LRR receptor-like serine/threonine-protei... [more]
Y5343_ARATH1.334e-5245.00Probable LRR receptor-like serine/threonine-protei... [more]
ACR4_ARATH1.334e-5246.58Serine/threonine-protein kinase-like protein ACR4 ... [more]
WAKLQ_ARATH1.742e-5244.63Wall-associated receptor kinase-like 20 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionC02021G02SK IF1 Citrus clementina cDNA clone C02021G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290212 ID=CX290212; Name=CX290212; organism=Citrus clementina; type=EST; length=758bp
GCCAATTCTAACTCGGGTTACCGCTTCCCTTTTGTTGCTGTTCAAGAAGC
CACAAACAACTTCGACGAGAGCTGGGTTATTGGGATTGGTGGTTTTGGGA
AGGTATACAAAGGAGAGCTGAATGATGGTACAAAAGTGGCTGTTAAGAGG
GGAAACCCCCGATCCCAGCAGGGACTTGCAGAGTTCCAAACCGAGATTGA
GATGCTGTCTCAGTTCCGGCACCGCCATCTGGTTTCATTAATTGGATATT
GTGATGAAAAGAATGAGATGATCTTGATTTATGAATATATGGAAAATGGG
ACCCTCAAGGGTCATCTCTATGGCTCCGGTCTTCCCAGCTTGAGTTGGAA
GCAGAGACTTGAGATTTGCATTGGATCTGCTAGGGGACTTCATTACCTTC
ACACTGGCTATGCCAAAGCAGTTATTCACCGTGATGTAAAGTCTGCAAAT
ATCTTACTTGATGAGAACTTCATGGCAAAGGTTGCTGATTTTGGATTGTC
CAAGACAGGACCTGAAATTGATCAAACCCATGTGAGTACTGCAGTGAAAG
GAAGTTTTGGGTATCTTGATCCTGAATACTTCAGAAGGCAGCAACTAACT
GAAAAGTCAGATGTTTATTCATTCGGAGTGGTTTTGTTTGAAGTCCTTTG
TGCCAGACCTGTTATAGATCCAACTCTTCCGAGGGAAATGGTGAACTTTA
GCCGATGGGCCCATGAATGGCAGAATAAGGGGCAGCTGGATCAATCATCG
ACCTACTC
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