CX290212

Overview
NameCX290212
Unique NameCX290212
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length758
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: TIE2_HUMAN (Angiopoietin-1 receptor OS=Homo sapiens GN=TEK PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 8.169e-18
Identity = 72/215 (33.49%), Postives = 112/215 (52.09%), Query Frame = 1
Query:   76 VIGIGGFGKVYKGELN-DGTKV--AVKRGNP-RSQQGLAEFQTEIEMLSQFRHR-HLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGL--------------PSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQL-----TEKSDVYSFGVVLFEVL 648
            VIG G FG+V K  +  DG ++  A+KR     S+    +F  E+E+L +  H  ++++L+G C+ +  + L  EY  +G L   L  S +               +LS +Q L      ARG+ YL     K  IHRD+ + NIL+ EN++AK+ADFGLS+ G E+        VK + G L   +   + L     T  SDV+S+GV+L+E++
Sbjct:  829 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR-GQEV-------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 1032          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: TIE2_BOVIN (Angiopoietin-1 receptor OS=Bos taurus GN=TEK PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.169e-18
Identity = 72/215 (33.49%), Postives = 112/215 (52.09%), Query Frame = 1
Query:   76 VIGIGGFGKVYKGELN-DGTKV--AVKRGNP-RSQQGLAEFQTEIEMLSQFRHR-HLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGL--------------PSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQL-----TEKSDVYSFGVVLFEVL 648
            VIG G FG+V K  +  DG ++  A+KR     S+    +F  E+E+L +  H  ++++L+G C+ +  + L  EY  +G L   L  S +               +LS +Q L      ARG+ YL     K  IHRD+ + NIL+ EN++AK+ADFGLS+ G E+        VK + G L   +   + L     T  SDV+S+GV+L+E++
Sbjct:  830 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR-GQEV-------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV 1033          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: RIPK2_BOVIN (Receptor-interacting serine/threonine-protein kinase 2 OS=Bos taurus GN=RIPK2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.169e-18
Identity = 57/175 (32.57%), Postives = 98/175 (56.00%), Query Frame = 1
Query:  193 EIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGS-GLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSK-TGPEIDQTHVSTAVK--GSFGYLDPEYF---RRQQLTEKSDVYSFGVVLFEVLCAR-PVIDPTLPREMV 693
            E E+L + R  +++ ++G C+E   + ++ EYM NG+L   L+     P + W  R  I    A G++YLH      ++H D+K+ NILLD  F  K+ADFGLSK     + Q+  S +    G+  Y+ PE +   ++ + + K D+YS+ ++++EVL  + P  D T P +++
Sbjct:   66 EAEILHKARFSYILPILGICNEPEFLGIVTEYMPNGSLNELLHRKIEYPDVPWPLRFRILHEIALGVNYLHN-MNPPLLHHDLKTQNILLDNEFHVKIADFGLSKWRMMSLSQSRSSKSAPEGGTIVYMPPENYEPGQKARASVKHDIYSYAIIIWEVLSRKQPFEDVTNPLQIM 239          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: PAKH_DICDI (Serine/threonine-protein kinase pakH OS=Dictyostelium discoideum GN=pakH-1 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.169e-18
Identity = 62/209 (29.67%), Postives = 101/209 (48.33%), Query Frame = 1
Query:   58 NFDESWVIGIGGFGKVYKG-ELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLP 681
            +F+    +G G FG VY+    +  T +A+K         +     EI++L +  + ++VS  G    KN+  ++ +Y    +    +   G  +   K+   I   S  GL YLH+   K +IHRD+KSANILLDE    K+ADFG+S+   +I  T    ++ G+  ++ PE   +     K DV+S G+V  E+    P +    P
Sbjct:   41 SFEIQEKLGEGSFGSVYRAIHKSSNTSIAIKEFEIFEANDVEPISKEIQILKKCNNPYVVSYFGSIMLKNKYWILMDYCSLSSFNDIMQSIG-KTFKEKEISLILQQSLLGLVYLHS---KQIIHRDIKSANILLDETGQVKIADFGVSQ---QIQSTFSKGSIAGTPYWMAPEILNQTDYNNKIDVWSLGIVAIELADGEPPLSEVNP 242          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: LCK_MOUSE (Proto-oncogene tyrosine-protein kinase LCK OS=Mus musculus GN=Lck PE=1 SV=4)

HSP 1 Score: 90.8929 bits (224), Expect = 8.169e-18
Identity = 68/211 (32.23%), Postives = 105/211 (49.76%), Query Frame = 1
Query:   79 IGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDP--TLPREMVNFSR 705
            +G G FG+V+ G  N  TKVAVK     S    A F  E  ++ Q +H  LV L     ++  + +I EYMENG+L   L       L+  + L++    A G+ ++     +  IHRD+++ANIL+ +    K+ADFGL++   + + T      K    +  PE       T KSDV+SFG++L E++    +  P  T P  + N  R
Sbjct:  251 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHPRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLNVNKLLDMAAQIAEGMAFIEE---QNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 455          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: FES_MOUSE (Proto-oncogene tyrosine-protein kinase Fes/Fps OS=Mus musculus GN=Fes PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 8.169e-18
Identity = 64/192 (33.33%), Postives = 102/192 (53.12%), Query Frame = 1
Query:   79 IGIGGFGKVYKGELN-DGTKVAVKRGNPRSQQGL-AEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTA--VKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFE 642
            IG G FG+V+ G L  D T VAVK         L A+F  E  +L Q+ H ++V LIG C +K  + ++ E ++ G     L   G   L  K  L++   +A G+ YL +   K  IHRD+ + N L+ E  + K++DFG+S+   E D  + ++A   +    +  PE     + + +SDV+SFG++L+E
Sbjct:  567 IGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYNHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGA-RLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSR--EEADGIYAASAGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWE 752          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: EPHB5_CHICK (Ephrin type-B receptor 5 OS=Gallus gallus GN=EPHB5 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.169e-18
Identity = 69/225 (30.67%), Postives = 112/225 (49.78%), Query Frame = 1
Query:   13 SGYRFPFVAVQEATNNFDESW-----VIGIGGFGKVYKGELNDGTK----VAVKR-GNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKG---SFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVL 648
            S Y  P  A++E     D S+     VIG G FG+V  G L    K    VA+K   +  + +   EF +E  ++ QF H +++ L G   +   ++++ E+MENG+L   L        S  Q + +  G A G+ YL        +HRD+ + NIL++ N + KV+DFGLS+   +       T   G      +  PE  + ++ T  SDV+S+G+V++EV+
Sbjct:  616 STYEDPNEAIREFAKEIDVSFIKIEEVIGSGEFGEVCFGRLKHPGKREYTVAIKTLKSGYTDEQRREFLSEASIMGQFEHPNVIHLEGVVTKSRPVMIVTEFMENGSLDSFLRQKE-GQFSVLQLVGMLRGIAAGMRYLSD---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDASNPTYTGALGCKIPIRWTAPEAVQYRKFTSSSDVWSYGIVMWEVM 836          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: EPHA3_HUMAN (Ephrin type-A receptor 3 OS=Homo sapiens GN=EPHA3 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 8.169e-18
Identity = 67/222 (30.18%), Postives = 108/222 (48.65%), Query Frame = 1
Query:   19 YRFPFVAVQEATNNFDES-----WVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAE-----FQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLPSLSWKQRLEICIGSARGLHYLHT-GYAKAVIHRDVKSANILLDENFMAKVADFGLSKT-GPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVL 648
            Y  P  AV E     D +      V+G G FG+V  G L   +K  +       + G  E     F  E  ++ QF H +++ L G   +   ++++ EYMENG+L   L        +  Q + +  G A G+ YL   GY    +HRD+ + NIL++ N + KV+DFGLS+    + +  + +   K    +  PE    ++ T  SDV+S+G+VL+EV+
Sbjct:  602 YEDPTQAVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 818          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: CLA4_CANAL (Serine/threonine-protein kinase CLA4 OS=Candida albicans GN=CLA4 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.169e-18
Identity = 60/196 (30.61%), Postives = 104/196 (53.06%), Query Frame = 1
Query:   82 GIGGFGKVYKGEL--NDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLI-GYCDEKNEMILIYEYMENGTLKGHLYGSGLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARP 660
            G G  G VY  E+  ++  K+A+K+ +  +Q        EI ++   +H+++V+ +  Y    NE+ +I EYM+ G+L   +  +    L+ KQ   IC  + +GL +LH    K +IHRD+KS N+LLD     K+ DFG        DQ +    + G+  ++ PE  ++++  EK DV+S G++  E++   P
Sbjct:  687 GQGASGNVYLAEMIKDNNRKIAIKQMDLDAQPRKELIINEILVMKDSQHKNIVNFLDSYLIGDNELWVIMEYMQGGSLTEIIENNDF-KLNEKQIATICFETLKGLQHLHK---KHIIHRDIKSDNVLLDAYGNVKITDFGF--CAKLTDQRNKRATMVGTPYWMAPEVVKQKEYDEKVDVWSLGIMTIEMIEGEP 876          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: ROCO9_DICDI (Probable serine/threonine-protein kinase roco9 OS=Dictyostelium discoideum GN=roco9 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.067e-17
Identity = 69/200 (34.50%), Postives = 102/200 (51.00%), Query Frame = 1
Query:   79 IGIGGFGKVYKGELNDGTKVAVKR------GNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDEN----FMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVL 648
            IG GG   VYKG+    + VA+K       G+  S+   AE++ EI  LS F H +++ L G+C E   + +I E+   G L  +++    P L W+ R++I  G A  L  LH     +V+HRD+KS NILL           + DF LS     +    V   V     +L PE    +  ++KSDVY++GV+LFE+L
Sbjct: 3014 IGEGGTATVYKGKWRQ-SDVAIKLLKTDVVGSDFSKV-FAEYRREIFCLSSFIHDNILDLKGFCLEP--LAIITEFQSGGNLYDYIHDLKNP-LDWQLRIKIAKGIAASLQTLHDS-RPSVVHRDLKSPNILLSSKDSLTMECHLCDFSLSGFSTTVANRSVQNPV-----WLAPEVINNELCSDKSDVYAYGVILFELL 3202          
The following BLAST results are available for this feature:
BLAST of CX290212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TIE2_HUMAN8.169e-1833.49Angiopoietin-1 receptor OS=Homo sapiens GN=TEK PE=... [more]
TIE2_BOVIN8.169e-1833.49Angiopoietin-1 receptor OS=Bos taurus GN=TEK PE=2 ... [more]
RIPK2_BOVIN8.169e-1832.57Receptor-interacting serine/threonine-protein kina... [more]
PAKH_DICDI8.169e-1829.67Serine/threonine-protein kinase pakH OS=Dictyostel... [more]
LCK_MOUSE8.169e-1832.23Proto-oncogene tyrosine-protein kinase LCK OS=Mus ... [more]
FES_MOUSE8.169e-1833.33Proto-oncogene tyrosine-protein kinase Fes/Fps OS=... [more]
EPHB5_CHICK8.169e-1830.67Ephrin type-B receptor 5 OS=Gallus gallus GN=EPHB5... [more]
EPHA3_HUMAN8.169e-1830.18Ephrin type-A receptor 3 OS=Homo sapiens GN=EPHA3 ... [more]
CLA4_CANAL8.169e-1830.61Serine/threonine-protein kinase CLA4 OS=Candida al... [more]
ROCO9_DICDI1.067e-1734.50Probable serine/threonine-protein kinase roco9 OS=... [more]

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Properties
Property NameValue
Genbank descriptionC02021G02SK IF1 Citrus clementina cDNA clone C02021G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290212 ID=CX290212; Name=CX290212; organism=Citrus clementina; type=EST; length=758bp
GCCAATTCTAACTCGGGTTACCGCTTCCCTTTTGTTGCTGTTCAAGAAGC
CACAAACAACTTCGACGAGAGCTGGGTTATTGGGATTGGTGGTTTTGGGA
AGGTATACAAAGGAGAGCTGAATGATGGTACAAAAGTGGCTGTTAAGAGG
GGAAACCCCCGATCCCAGCAGGGACTTGCAGAGTTCCAAACCGAGATTGA
GATGCTGTCTCAGTTCCGGCACCGCCATCTGGTTTCATTAATTGGATATT
GTGATGAAAAGAATGAGATGATCTTGATTTATGAATATATGGAAAATGGG
ACCCTCAAGGGTCATCTCTATGGCTCCGGTCTTCCCAGCTTGAGTTGGAA
GCAGAGACTTGAGATTTGCATTGGATCTGCTAGGGGACTTCATTACCTTC
ACACTGGCTATGCCAAAGCAGTTATTCACCGTGATGTAAAGTCTGCAAAT
ATCTTACTTGATGAGAACTTCATGGCAAAGGTTGCTGATTTTGGATTGTC
CAAGACAGGACCTGAAATTGATCAAACCCATGTGAGTACTGCAGTGAAAG
GAAGTTTTGGGTATCTTGATCCTGAATACTTCAGAAGGCAGCAACTAACT
GAAAAGTCAGATGTTTATTCATTCGGAGTGGTTTTGTTTGAAGTCCTTTG
TGCCAGACCTGTTATAGATCCAACTCTTCCGAGGGAAATGGTGAACTTTA
GCCGATGGGCCCATGAATGGCAGAATAAGGGGCAGCTGGATCAATCATCG
ACCTACTC
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