CX290212

Overview
NameCX290212
Unique NameCX290212
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length758
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: RLCK7_ARATH (Probable serine/threonine-protein kinase RLCKVII OS=Arabidopsis thaliana GN=At1g07870 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.276e-52
Identity = 109/232 (46.98%), Postives = 147/232 (63.36%), Query Frame = 1
Query:   25 FPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKV-AVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLY--GSGLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWA 711
            F F  + EAT NF     +G GGFGKV+KG +    +V A+K+ +    QG+ EF  E+  LS   H +LV LIG+C E ++ +L+YEYM  G+L+ HL+   SG   L W  R++I  G+ARGL YLH      VI+RD+K +NILL E++  K++DFGL+K GP  D+THVST V G++GY  P+Y    QLT KSD+YSFGVVL E++  R  ID T  R+  N   WA
Sbjct:   91 FTFQELAEATGNFRSDCFLGEGGFGKVFKGTIEKLDQVVAIKQLDRNGVQGIREFVVEVLTLSLADHPNLVKLIGFCAEGDQRLLVYEYMPQGSLEDHLHVLPSGKKPLDWNTRMKIAAGAARGLEYLHDRMTPPVIYRDLKCSNILLGEDYQPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDNTKTRKDQNLVGWA 322          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: RLK7_ARATH (Receptor-like protein kinase At5g59670 OS=Arabidopsis thaliana GN=At5g59670 PE=1 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 5.070e-52
Identity = 109/240 (45.42%), Postives = 153/240 (63.75%), Query Frame = 1
Query:   22 RFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLPSL-SWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWAHEWQNKGQL 738
            RF +  V + T NF    V+G GGFG VY G +    +VAVK  +  S QG  EF+ E+++L +  H +LVSL+GYC E + + L+YE++ NG LK HL G G  S+ +W  RL I + +A GL YLH G    ++HRDVK+ANILLDENF AK+ADFGLS++     ++  ST + G+ GYLDPE +   +L EKSDVYSFG+VL E++  +PVI+ T      + ++W     N+G +
Sbjct:  553 RFTYSEVVQVTKNFQR--VLGKGGFGMVYHGTVKGSEQVAVKVLSQSSTQGSKEFKAEVDLLLRVHHTNLVSLVGYCCEGDYLALVYEFLPNGDLKQHLSGKGGNSIINWSIRLRIALEAALGLEYLHIGCTPPMVHRDVKTANILLDENFKAKLADFGLSRSFQGEGESQESTTIAGTLGYLDPECYHSGRLGEKSDVYSFGIVLLEMITNQPVINQTSGDS--HITQWVGFQMNRGDI 788          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: PBS1_ARATH (Serine/threonine-protein kinase PBS1 OS=Arabidopsis thaliana GN=PBS1 PE=1 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 6.621e-52
Identity = 111/238 (46.64%), Postives = 149/238 (62.61%), Query Frame = 1
Query:   13 SGYRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELND-GTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLP----SLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWA 711
            + + F F  +  AT NF     +G GGFG+VYKG L+  G  VAVK+ +    QG  EF  E+ MLS   H +LV+LIGYC + ++ +L+YE+M  G+L+ HL+   LP    +L W  R++I  G+A+GL +LH      VI+RD KS+NILLDE F  K++DFGL+K GP  D++HVST V G++GY  PEY    QLT KSDVYSFGVV  E++  R  ID  +P    N   WA
Sbjct:   70 AAHTFAFRELAAATMNFHPDTFLGEGGFGRVYKGRLDSTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHD--LPPDKEALDWNMRMKIAAGAAKGLEFLHDKANPPVIYRDFKSSNILLDEGFHPKLSDFGLAKLGPTGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSEMPHGEQNLVAWA 305          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.129e-51
Identity = 109/245 (44.49%), Postives = 153/245 (62.45%), Query Frame = 1
Query:   25 FPFVAVQEATNNFDESWVIGIGGFGKVYKGELND----------GTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSG---LPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWAHEW 720
            F F  ++ AT NF    V+G GGFG V++G L++          G  +AVKR NP   QG  E+ TEI  L Q  H +LV LIGYC E  + +L+YE+M  G+L+ HL+ +G      LSW  R+++ + +A+GL +LH+   K VI+RD+K++NILLD +F AK++DFGL++ GP  +Q++VST V G+FGY  PEY     L  +SDVYSFGVVL E+LC R  +D   P +  N   WA  +
Sbjct:   49 FSFNELKLATRNFRSDSVVGEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNPDGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHSDPVK-VIYRDIKASNILLDSDFNAKLSDFGLARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELLCGRQALDHNRPAKEQNLVDWARPY 292          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: WAKLO_ARATH (Wall-associated receptor kinase-like 14 OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.475e-51
Identity = 108/251 (43.03%), Postives = 158/251 (62.95%), Query Frame = 1
Query:    1 ANSNSGYRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLY---GSGLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWAHEWQNKGQLDQ 744
            A ++S   FP+  +++AT+ F E   +GIG +G VY+G+L +   VA+KR   R  + L +   EI++LS   H +LV L+G C E+ + +L+YEYM NGTL  HL    GSGLP   W  RL +   +A+ + YLH+     + HRD+KS NILLD +F +KVADFGLS+ G   + +H+STA +G+ GYLDP+Y +   L++KSDVYSFGVVL E++    V+D T P   +N +  A +    G +D+
Sbjct:  328 AGNSSVAFFPYKEIEKATDGFSEKQKLGIGAYGTVYRGKLQNDEWVAIKRLRHRDSESLDQVMNEIKLLSSVSHPNLVRLLGCCIEQGDPVLVYEYMPNGTLSEHLQRDRGSGLP---WTLRLTVATQTAKAIAYLHSSMNPPIYHRDIKSTNILLDYDFNSKVADFGLSRLG-MTESSHISTAPQGTPGYLDPQYHQCFHLSDKSDVYSFGVVLAEIITGLKVVDFTRPHTEINLAALAVDKIGSGCIDE 574          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.475e-51
Identity = 108/234 (46.15%), Postives = 148/234 (63.25%), Query Frame = 1
Query:   25 FPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRS--QQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSG---LPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWA 711
            F +  +++AT  F E   +G G F  V+KG L DGT VAVKR    S  ++   EF  E+++LS+  H HL++L+GYC++ +E +L+YE+M +G+L  HL+G        L+W +R+ I + +ARG+ YLH      VIHRD+KS+NIL+DE+  A+VADFGLS  GP    T +S    G+ GYLDPEY+R   LT KSDVYSFGVVL E+L  R  ID  +  E  N   WA
Sbjct:  493 FSYEELEQATGGFSEDSQVGKGSFSCVFKGILRDGTVVAVKRAIKASDVKKSSKEFHNELDLLSRLNHAHLLNLLGYCEDGSERLLVYEFMAHGSLYQHLHGKDPNLKKRLNWARRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEDHNARVADFGLSILGPADSGTPLSELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRKAID--MQFEEGNIVEWA 724          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.516e-51
Identity = 109/237 (45.99%), Postives = 151/237 (63.71%), Query Frame = 1
Query:    4 NSNSGYRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYG--SGLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRW 708
            N +S        + ++T++F+++ +IG GGFG VYK  L DGTKVA+KR +  + Q   EFQ E+E LS+ +H +LV L+GYC+ KN+ +LIY YM+NG+L   L+    G PSL WK RL I  G+A GL YLH      ++HRD+KS+NILL + F+A +ADFGL++     D THV+T + G+ GY+ PEY +    T K DVYSFGVVL E+L  R  +D   PR   +   W
Sbjct:  724 NKDSNNELSLDDILKSTSSFNQANIIGCGGFGLVYKATLPDGTKVAIKRLSGDTGQMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLADFGLARLILPYD-THVTTDLVGTLGYIPPEYGQASVATYKGDVYSFGVVLLELLTGRRPMDVCKPRGSRDLISW 959          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.292e-51
Identity = 105/241 (43.57%), Postives = 152/241 (63.07%), Query Frame = 1
Query:   25 FPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYG---SGLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWAHEWQNKGQL 738
            F    ++ AT+NFD +  IG GGFG VYKGEL++G  +AVK+ + +S+QG  EF  EI M+S  +H +LV L G C E N++IL+YEY+EN  L   L+G   S    L W  R +I +G A+GL +LH      ++HRD+K++N+LLD++  AK++DFGL+K   +   TH+ST + G+ GY+ PEY  R  LTEK+DVYSFGVV  E++  +   +     + V    WA+  Q +G L
Sbjct:  666 FTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLIAVKQLSAKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDD-GNTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKSNTNFRPTEDFVYLLDWAYVLQERGSL 905          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 200.675 bits (509), Expect = 7.321e-51
Identity = 107/241 (44.40%), Postives = 146/241 (60.58%), Query Frame = 1
Query:   25 FPFVAVQEATNNFDESWVIGIGGFGKVYKGELND----------GTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLY--GSGLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRWA 711
            F F  ++ AT NF    V+G GGFG V+KG +++          G  +AVK+ N    QG  E+  E+  L QF H +LV LIGYC E    +L+YE+M  G+L+ HL+  GS    LSW  RL++ +G+A+GL +LH     +VI+RD K++NILLD  + AK++DFGL+K GP  D++HVST + G++GY  PEY     LT KSDVYS+GVVL EVL  R  +D   P        WA
Sbjct:   57 FTFAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQTLTASKPGTGVVIAVKKLNQDGWQGHQEWLAEVNYLGQFSHPNLVKLIGYCLEDEHRLLVYEFMPRGSLENHLFRRGSYFQPLSWTLRLKVALGAAKGLAFLHNAET-SVIYRDFKTSNILLDSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWA 296          
BLAST of CX290212 vs. ExPASy Swiss-Prot
Match: Y1570_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g05700 OS=Arabidopsis thaliana GN=At1g05700 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.631e-50
Identity = 111/236 (47.03%), Postives = 152/236 (64.41%), Query Frame = 1
Query:    1 ANSNSGYRFPFVAVQEATNNFDESWVIGIGGFGKVYKGELNDGTKVAVKRGNPRSQQGLAEFQTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMENGTLKGHLYGSGLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENFMAKVADFGLSKTGPEIDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPTLPREMVNFSRW 708
            A S +   F F  V + TNNF +  V+G GGFG VY G   D  +VAVK  +  S QG  EF++E+E+L +  H +L +LIGY  E ++M LIYE+M NG +  HL G    +LSW+QRL+I + +A+GL YLH G    ++HRDVK++NILL+E   AK+ADFGLS++     ++HVST V G+ GYLDP  F    L EKSD+YSFGVVL E++  + VI  +  +  V+ S W
Sbjct:  552 AKSENKLLFTFADVIKMTNNFGQ--VLGKGGFGTVYHG-FYDNLQVAVKLLSETSAQGFKEFRSEVEVLVRVHHVNLTALIGYFHEGDQMGLIYEFMANGNMADHLAGKYQHTLSWRQRLQIALDAAQGLEYLHCGCKPPIVHRDVKTSNILLNEKNRAKLADFGLSRSFHTESRSHVSTLVAGTPGYLDPLCFETNGLNEKSDIYSFGVVLLEMITGKTVIKESQTKR-VHVSDW 783          
The following BLAST results are available for this feature:
BLAST of CX290212 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RLCK7_ARATH2.276e-5246.98Probable serine/threonine-protein kinase RLCKVII O... [more]
RLK7_ARATH5.070e-5245.42Receptor-like protein kinase At5g59670 OS=Arabidop... [more]
PBS1_ARATH6.621e-5246.64Serine/threonine-protein kinase PBS1 OS=Arabidopsi... [more]
Y3545_ARATH1.129e-5144.49Probable receptor-like protein kinase At3g55450 OS... [more]
WAKLO_ARATH1.475e-5143.03Wall-associated receptor kinase-like 14 OS=Arabido... [more]
CRI4_MAIZE1.475e-5146.15Putative receptor protein kinase CRINKLY4 OS=Zea m... [more]
PSKR1_DAUCA2.516e-5145.99Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
Y1765_ARATH4.292e-5143.57Probable LRR receptor-like serine/threonine-protei... [more]
APK1B_ARATH7.321e-5144.40Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
Y1570_ARATH1.631e-5047.03Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionC02021G02SK IF1 Citrus clementina cDNA clone C02021G02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290212 ID=CX290212; Name=CX290212; organism=Citrus clementina; type=EST; length=758bp
GCCAATTCTAACTCGGGTTACCGCTTCCCTTTTGTTGCTGTTCAAGAAGC
CACAAACAACTTCGACGAGAGCTGGGTTATTGGGATTGGTGGTTTTGGGA
AGGTATACAAAGGAGAGCTGAATGATGGTACAAAAGTGGCTGTTAAGAGG
GGAAACCCCCGATCCCAGCAGGGACTTGCAGAGTTCCAAACCGAGATTGA
GATGCTGTCTCAGTTCCGGCACCGCCATCTGGTTTCATTAATTGGATATT
GTGATGAAAAGAATGAGATGATCTTGATTTATGAATATATGGAAAATGGG
ACCCTCAAGGGTCATCTCTATGGCTCCGGTCTTCCCAGCTTGAGTTGGAA
GCAGAGACTTGAGATTTGCATTGGATCTGCTAGGGGACTTCATTACCTTC
ACACTGGCTATGCCAAAGCAGTTATTCACCGTGATGTAAAGTCTGCAAAT
ATCTTACTTGATGAGAACTTCATGGCAAAGGTTGCTGATTTTGGATTGTC
CAAGACAGGACCTGAAATTGATCAAACCCATGTGAGTACTGCAGTGAAAG
GAAGTTTTGGGTATCTTGATCCTGAATACTTCAGAAGGCAGCAACTAACT
GAAAAGTCAGATGTTTATTCATTCGGAGTGGTTTTGTTTGAAGTCCTTTG
TGCCAGACCTGTTATAGATCCAACTCTTCCGAGGGAAATGGTGAACTTTA
GCCGATGGGCCCATGAATGGCAGAATAAGGGGCAGCTGGATCAATCATCG
ACCTACTC
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